Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13860 and CA264_13865 are separated by 34 nucleotides CA264_13865 and CA264_13870 are separated by 243 nucleotides CA264_13870 and CA264_13875 are separated by 75 nucleotides CA264_13875 and CA264_13880 are separated by 71 nucleotides
CA264_13860: CA264_13860 - hypothetical protein, at 3,237,785 to 3,238,282
_13860
CA264_13865: CA264_13865 - hypothetical protein, at 3,238,317 to 3,238,565
_13865
CA264_13870: CA264_13870 - hypothetical protein, at 3,238,809 to 3,239,201
_13870
CA264_13875: CA264_13875 - hypothetical protein, at 3,239,277 to 3,240,101
_13875
CA264_13880: CA264_13880 - hypothetical protein, at 3,240,173 to 3,240,424
_13880
Position (kb)
3238
3239
3240 Strain fitness (log2 ratio)
-2
-1
0
1 at 3237.887 kb on - strand, within CA264_13860 at 3237.890 kb on + strand, within CA264_13860 at 3237.891 kb on - strand, within CA264_13860 at 3237.891 kb on - strand, within CA264_13860 at 3238.212 kb on - strand, within CA264_13860 at 3238.260 kb on + strand at 3238.292 kb on + strand at 3238.313 kb on + strand at 3238.399 kb on + strand, within CA264_13865 at 3238.402 kb on + strand, within CA264_13865 at 3238.547 kb on + strand at 3238.554 kb on + strand at 3238.579 kb on + strand at 3238.579 kb on + strand at 3238.580 kb on - strand at 3238.751 kb on + strand at 3238.752 kb on - strand at 3238.752 kb on - strand at 3238.777 kb on + strand at 3238.778 kb on - strand at 3238.810 kb on + strand at 3239.007 kb on - strand, within CA264_13870 at 3239.072 kb on + strand, within CA264_13870 at 3239.074 kb on + strand, within CA264_13870 at 3239.075 kb on - strand, within CA264_13870 at 3239.087 kb on - strand, within CA264_13870 at 3239.126 kb on + strand, within CA264_13870 at 3239.127 kb on - strand, within CA264_13870 at 3239.127 kb on - strand, within CA264_13870 at 3239.153 kb on + strand, within CA264_13870 at 3239.236 kb on + strand at 3239.259 kb on + strand at 3239.377 kb on + strand, within CA264_13875 at 3239.393 kb on - strand, within CA264_13875 at 3239.393 kb on - strand, within CA264_13875 at 3239.473 kb on - strand, within CA264_13875 at 3239.509 kb on + strand, within CA264_13875 at 3239.510 kb on - strand, within CA264_13875 at 3239.522 kb on + strand, within CA264_13875 at 3239.602 kb on + strand, within CA264_13875 at 3239.602 kb on + strand, within CA264_13875 at 3239.602 kb on + strand, within CA264_13875 at 3239.603 kb on - strand, within CA264_13875 at 3239.701 kb on + strand, within CA264_13875 at 3239.701 kb on + strand, within CA264_13875 at 3239.820 kb on + strand, within CA264_13875 at 3239.821 kb on - strand, within CA264_13875 at 3240.010 kb on - strand, within CA264_13875 at 3240.080 kb on + strand at 3240.089 kb on + strand at 3240.090 kb on - strand at 3240.100 kb on - strand at 3240.111 kb on + strand at 3240.111 kb on + strand at 3240.112 kb on - strand at 3240.112 kb on - strand at 3240.112 kb on - strand at 3240.115 kb on + strand at 3240.115 kb on + strand at 3240.116 kb on - strand at 3240.117 kb on + strand at 3240.122 kb on - strand at 3240.122 kb on - strand at 3240.122 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,237,887 - CA264_13860 0.20 -1.2 3,237,890 + CA264_13860 0.21 +0.6 3,237,891 - CA264_13860 0.21 -0.5 3,237,891 - CA264_13860 0.21 -0.0 3,238,212 - CA264_13860 0.86 +0.1 3,238,260 + -0.4 3,238,292 + -0.1 3,238,313 + -0.2 3,238,399 + CA264_13865 0.33 +0.3 3,238,402 + CA264_13865 0.34 +0.0 3,238,547 + +0.2 3,238,554 + +0.5 3,238,579 + +0.5 3,238,579 + -0.8 3,238,580 - -0.4 3,238,751 + +0.4 3,238,752 - -0.0 3,238,752 - -0.5 3,238,777 + +1.7 3,238,778 - -1.7 3,238,810 + +0.6 3,239,007 - CA264_13870 0.50 +0.5 3,239,072 + CA264_13870 0.67 +0.5 3,239,074 + CA264_13870 0.67 +0.2 3,239,075 - CA264_13870 0.68 -0.4 3,239,087 - CA264_13870 0.71 -1.5 3,239,126 + CA264_13870 0.81 +1.1 3,239,127 - CA264_13870 0.81 -2.2 3,239,127 - CA264_13870 0.81 -1.4 3,239,153 + CA264_13870 0.88 +0.4 3,239,236 + -0.0 3,239,259 + +0.5 3,239,377 + CA264_13875 0.12 -2.1 3,239,393 - CA264_13875 0.14 -0.1 3,239,393 - CA264_13875 0.14 +0.5 3,239,473 - CA264_13875 0.24 -0.1 3,239,509 + CA264_13875 0.28 -0.5 3,239,510 - CA264_13875 0.28 +1.1 3,239,522 + CA264_13875 0.30 +1.1 3,239,602 + CA264_13875 0.39 +1.6 3,239,602 + CA264_13875 0.39 -1.7 3,239,602 + CA264_13875 0.39 +1.7 3,239,603 - CA264_13875 0.40 -1.0 3,239,701 + CA264_13875 0.51 +0.3 3,239,701 + CA264_13875 0.51 +0.1 3,239,820 + CA264_13875 0.66 -1.2 3,239,821 - CA264_13875 0.66 +0.9 3,240,010 - CA264_13875 0.89 -0.4 3,240,080 + -0.9 3,240,089 + -0.9 3,240,090 - -0.5 3,240,100 - -0.3 3,240,111 + -1.4 3,240,111 + -0.9 3,240,112 - -0.2 3,240,112 - +0.1 3,240,112 - +0.1 3,240,115 + -1.0 3,240,115 + +1.1 3,240,116 - -0.5 3,240,117 + +0.7 3,240,122 - -0.5 3,240,122 - -0.6 3,240,122 - -0.8
Or see this region's nucleotide sequence