Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13200 and CA264_13205 are separated by 74 nucleotides CA264_13205 and CA264_13210 are separated by 255 nucleotides CA264_13210 and CA264_13215 are separated by 153 nucleotides CA264_13215 and CA264_13220 are separated by 183 nucleotides
CA264_13200: CA264_13200 - lysine--tRNA ligase, at 3,078,439 to 3,079,983
_13200
CA264_13205: CA264_13205 - hypothetical protein, at 3,080,058 to 3,080,507
_13205
CA264_13210: CA264_13210 - hypothetical protein, at 3,080,763 to 3,081,101
_13210
CA264_13215: CA264_13215 - hypothetical protein, at 3,081,255 to 3,081,674
_13215
CA264_13220: CA264_13220 - kazal domain protein, at 3,081,858 to 3,082,094
_13220
Position (kb)
3080
3081
3082 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3080.059 kb on + strand at 3080.084 kb on + strand at 3080.084 kb on + strand at 3080.084 kb on + strand at 3080.085 kb on - strand at 3080.100 kb on - strand at 3080.227 kb on - strand, within CA264_13205 at 3080.276 kb on + strand, within CA264_13205 at 3080.364 kb on + strand, within CA264_13205 at 3080.382 kb on + strand, within CA264_13205 at 3080.422 kb on + strand, within CA264_13205 at 3080.423 kb on - strand, within CA264_13205 at 3080.443 kb on - strand, within CA264_13205 at 3080.508 kb on - strand at 3080.519 kb on + strand at 3080.540 kb on - strand at 3080.587 kb on - strand at 3080.587 kb on - strand at 3080.607 kb on - strand at 3080.798 kb on + strand, within CA264_13210 at 3080.799 kb on - strand, within CA264_13210 at 3080.964 kb on - strand, within CA264_13210 at 3080.973 kb on - strand, within CA264_13210 at 3081.015 kb on - strand, within CA264_13210 at 3081.079 kb on - strand at 3081.090 kb on - strand at 3081.137 kb on + strand at 3081.138 kb on - strand at 3081.157 kb on - strand at 3081.169 kb on - strand at 3081.169 kb on - strand at 3081.173 kb on + strand at 3081.174 kb on - strand at 3081.176 kb on - strand at 3081.179 kb on + strand at 3081.180 kb on - strand at 3081.180 kb on - strand at 3081.181 kb on + strand at 3081.182 kb on - strand at 3081.189 kb on - strand at 3081.207 kb on - strand at 3081.217 kb on + strand at 3081.331 kb on + strand, within CA264_13215 at 3081.332 kb on - strand, within CA264_13215 at 3081.332 kb on - strand, within CA264_13215 at 3081.358 kb on + strand, within CA264_13215 at 3081.364 kb on - strand, within CA264_13215 at 3081.388 kb on + strand, within CA264_13215 at 3081.388 kb on + strand, within CA264_13215 at 3081.628 kb on - strand, within CA264_13215 at 3081.674 kb on + strand at 3081.675 kb on - strand at 3081.703 kb on + strand at 3081.782 kb on + strand at 3081.782 kb on + strand at 3081.782 kb on + strand at 3081.817 kb on + strand at 3081.817 kb on + strand at 3081.821 kb on + strand at 3081.822 kb on - strand at 3081.839 kb on - strand at 3081.839 kb on - strand at 3081.842 kb on + strand at 3081.843 kb on - strand at 3081.852 kb on + strand at 3081.853 kb on - strand at 3081.853 kb on - strand at 3081.855 kb on - strand at 3081.988 kb on - strand, within CA264_13220 at 3082.020 kb on + strand, within CA264_13220 at 3082.055 kb on + strand, within CA264_13220 at 3082.065 kb on - strand, within CA264_13220
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,080,059 + +0.1 3,080,084 + -2.4 3,080,084 + +0.1 3,080,084 + +2.1 3,080,085 - -1.4 3,080,100 - +0.1 3,080,227 - CA264_13205 0.38 -0.7 3,080,276 + CA264_13205 0.48 +1.1 3,080,364 + CA264_13205 0.68 +0.2 3,080,382 + CA264_13205 0.72 -0.3 3,080,422 + CA264_13205 0.81 -0.5 3,080,423 - CA264_13205 0.81 -0.3 3,080,443 - CA264_13205 0.86 +0.1 3,080,508 - +0.1 3,080,519 + -1.9 3,080,540 - -0.0 3,080,587 - -1.1 3,080,587 - -0.3 3,080,607 - -0.4 3,080,798 + CA264_13210 0.10 -0.1 3,080,799 - CA264_13210 0.11 +2.8 3,080,964 - CA264_13210 0.59 +3.1 3,080,973 - CA264_13210 0.62 -1.4 3,081,015 - CA264_13210 0.74 +0.4 3,081,079 - +1.5 3,081,090 - +0.8 3,081,137 + -0.4 3,081,138 - -0.9 3,081,157 - -0.0 3,081,169 - -0.4 3,081,169 - +0.6 3,081,173 + -0.6 3,081,174 - +0.8 3,081,176 - +1.1 3,081,179 + -0.5 3,081,180 - +0.4 3,081,180 - -0.6 3,081,181 + +0.6 3,081,182 - +0.4 3,081,189 - -0.9 3,081,207 - -0.6 3,081,217 + -1.9 3,081,331 + CA264_13215 0.18 +1.1 3,081,332 - CA264_13215 0.18 -0.9 3,081,332 - CA264_13215 0.18 +0.9 3,081,358 + CA264_13215 0.25 +0.1 3,081,364 - CA264_13215 0.26 +2.7 3,081,388 + CA264_13215 0.32 +0.4 3,081,388 + CA264_13215 0.32 +0.9 3,081,628 - CA264_13215 0.89 -1.2 3,081,674 + -0.1 3,081,675 - -1.8 3,081,703 + -0.1 3,081,782 + +0.1 3,081,782 + -0.7 3,081,782 + -3.1 3,081,817 + -1.7 3,081,817 + -0.5 3,081,821 + +0.1 3,081,822 - -2.4 3,081,839 - +0.8 3,081,839 - -0.5 3,081,842 + -0.9 3,081,843 - +1.7 3,081,852 + +0.5 3,081,853 - -0.2 3,081,853 - -0.5 3,081,855 - -0.5 3,081,988 - CA264_13220 0.55 -0.2 3,082,020 + CA264_13220 0.68 +1.1 3,082,055 + CA264_13220 0.83 -0.8 3,082,065 - CA264_13220 0.87 -1.4
Or see this region's nucleotide sequence