Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13105 and CA264_13110 are separated by 134 nucleotides CA264_13110 and CA264_13115 are separated by 271 nucleotides
CA264_13105: CA264_13105 - 3-dehydroquinate synthase, at 3,056,793 to 3,057,830
_13105
CA264_13110: CA264_13110 - 3-deoxy-7-phosphoheptulonate synthase, at 3,057,965 to 3,059,062
_13110
CA264_13115: CA264_13115 - proline dehydrogenase, at 3,059,334 to 3,060,521
_13115
Position (kb)
3057
3058
3059
3060 Strain fitness (log2 ratio)
-1
0
1
2 at 3057.422 kb on + strand, within CA264_13105 at 3057.812 kb on + strand at 3057.816 kb on + strand at 3057.816 kb on + strand at 3057.816 kb on + strand at 3057.817 kb on - strand at 3057.865 kb on - strand at 3057.967 kb on - strand at 3057.967 kb on - strand at 3058.139 kb on - strand, within CA264_13110 at 3058.190 kb on - strand, within CA264_13110 at 3058.261 kb on - strand, within CA264_13110 at 3058.261 kb on - strand, within CA264_13110 at 3058.270 kb on + strand, within CA264_13110 at 3058.289 kb on + strand, within CA264_13110 at 3058.290 kb on - strand, within CA264_13110 at 3058.525 kb on - strand, within CA264_13110 at 3058.540 kb on - strand, within CA264_13110 at 3058.559 kb on + strand, within CA264_13110 at 3058.709 kb on + strand, within CA264_13110 at 3058.914 kb on - strand, within CA264_13110 at 3059.045 kb on - strand at 3059.083 kb on + strand at 3059.084 kb on - strand at 3059.084 kb on - strand at 3059.115 kb on - strand at 3059.173 kb on + strand at 3059.193 kb on + strand at 3059.209 kb on + strand at 3059.209 kb on + strand at 3059.224 kb on - strand at 3059.255 kb on - strand at 3059.324 kb on + strand at 3059.324 kb on + strand at 3059.325 kb on - strand at 3059.325 kb on - strand at 3059.327 kb on + strand at 3059.327 kb on + strand at 3059.349 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.408 kb on + strand at 3059.409 kb on - strand at 3059.415 kb on + strand at 3059.416 kb on - strand at 3059.416 kb on - strand at 3059.416 kb on - strand at 3059.426 kb on + strand at 3059.426 kb on + strand at 3059.427 kb on - strand at 3059.596 kb on - strand, within CA264_13115 at 3059.614 kb on + strand, within CA264_13115 at 3059.729 kb on + strand, within CA264_13115 at 3059.928 kb on + strand, within CA264_13115 at 3059.929 kb on - strand, within CA264_13115 at 3059.946 kb on + strand, within CA264_13115 at 3059.949 kb on - strand, within CA264_13115 at 3059.970 kb on + strand, within CA264_13115 at 3059.970 kb on + strand, within CA264_13115 at 3059.971 kb on - strand, within CA264_13115 at 3059.971 kb on - strand, within CA264_13115 at 3059.976 kb on - strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.989 kb on - strand, within CA264_13115 at 3060.051 kb on + strand, within CA264_13115 at 3060.051 kb on + strand, within CA264_13115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,057,422 + CA264_13105 0.61 +1.1 3,057,812 + -0.5 3,057,816 + -0.5 3,057,816 + +0.6 3,057,816 + -0.9 3,057,817 - -1.2 3,057,865 - -0.1 3,057,967 - -0.1 3,057,967 - +0.4 3,058,139 - CA264_13110 0.16 -0.6 3,058,190 - CA264_13110 0.20 -1.2 3,058,261 - CA264_13110 0.27 +2.1 3,058,261 - CA264_13110 0.27 -0.1 3,058,270 + CA264_13110 0.28 -0.1 3,058,289 + CA264_13110 0.30 -0.5 3,058,290 - CA264_13110 0.30 +0.4 3,058,525 - CA264_13110 0.51 +0.6 3,058,540 - CA264_13110 0.52 -0.1 3,058,559 + CA264_13110 0.54 +0.7 3,058,709 + CA264_13110 0.68 -0.1 3,058,914 - CA264_13110 0.86 -0.0 3,059,045 - -0.5 3,059,083 + -0.4 3,059,084 - +0.3 3,059,084 - +0.3 3,059,115 - +0.3 3,059,173 + +0.1 3,059,193 + -1.1 3,059,209 + -0.7 3,059,209 + -0.0 3,059,224 - +0.8 3,059,255 - -0.2 3,059,324 + +0.4 3,059,324 + +0.5 3,059,325 - -0.1 3,059,325 - +0.0 3,059,327 + +1.5 3,059,327 + +0.9 3,059,349 - -0.3 3,059,405 - +0.8 3,059,405 - +0.1 3,059,405 - -0.2 3,059,405 - -0.1 3,059,408 + -0.2 3,059,409 - -0.9 3,059,415 + -0.6 3,059,416 - +1.7 3,059,416 - +0.2 3,059,416 - -0.3 3,059,426 + +0.1 3,059,426 + -0.6 3,059,427 - +0.6 3,059,596 - CA264_13115 0.22 -1.7 3,059,614 + CA264_13115 0.24 +0.7 3,059,729 + CA264_13115 0.33 -0.0 3,059,928 + CA264_13115 0.50 +1.3 3,059,929 - CA264_13115 0.50 -0.4 3,059,946 + CA264_13115 0.52 -0.9 3,059,949 - CA264_13115 0.52 +0.2 3,059,970 + CA264_13115 0.54 +0.5 3,059,970 + CA264_13115 0.54 +2.7 3,059,971 - CA264_13115 0.54 +1.1 3,059,971 - CA264_13115 0.54 -0.6 3,059,976 - CA264_13115 0.54 -0.9 3,059,979 + CA264_13115 0.54 -0.4 3,059,979 + CA264_13115 0.54 -0.1 3,059,979 + CA264_13115 0.54 +0.7 3,059,979 + CA264_13115 0.54 -1.2 3,059,980 - CA264_13115 0.54 -0.1 3,059,980 - CA264_13115 0.54 -0.9 3,059,980 - CA264_13115 0.54 -0.3 3,059,989 - CA264_13115 0.55 +1.2 3,060,051 + CA264_13115 0.60 -0.5 3,060,051 + CA264_13115 0.60 -0.6
Or see this region's nucleotide sequence