Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12155 and CA264_12160 are separated by 315 nucleotides CA264_12160 and CA264_12165 overlap by 17 nucleotides
CA264_12155: CA264_12155 - histidine phosphatase family protein, at 2,835,141 to 2,835,725
_12155
CA264_12160: CA264_12160 - transcriptional regulator, at 2,836,041 to 2,836,439
_12160
CA264_12165: CA264_12165 - hypothetical protein, at 2,836,423 to 2,837,733
_12165
Position (kb)
2836
2837 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2835.243 kb on + strand, within CA264_12155 at 2835.245 kb on + strand, within CA264_12155 at 2836.020 kb on + strand at 2836.149 kb on + strand, within CA264_12160 at 2836.230 kb on + strand, within CA264_12160 at 2836.433 kb on + strand at 2836.434 kb on - strand at 2836.441 kb on + strand at 2836.442 kb on - strand at 2836.442 kb on - strand at 2836.534 kb on + strand at 2836.592 kb on + strand, within CA264_12165 at 2836.837 kb on + strand, within CA264_12165 at 2836.837 kb on + strand, within CA264_12165 at 2836.881 kb on + strand, within CA264_12165 at 2837.115 kb on + strand, within CA264_12165 at 2837.116 kb on - strand, within CA264_12165 at 2837.145 kb on + strand, within CA264_12165 at 2837.145 kb on + strand, within CA264_12165 at 2837.146 kb on - strand, within CA264_12165 at 2837.146 kb on - strand, within CA264_12165 at 2837.175 kb on + strand, within CA264_12165 at 2837.194 kb on - strand, within CA264_12165 at 2837.240 kb on + strand, within CA264_12165 at 2837.339 kb on + strand, within CA264_12165 at 2837.423 kb on - strand, within CA264_12165 at 2837.423 kb on - strand, within CA264_12165 at 2837.424 kb on + strand, within CA264_12165 at 2837.425 kb on - strand, within CA264_12165 at 2837.428 kb on + strand, within CA264_12165
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 2,835,243 + CA264_12155 0.17 -0.5 2,835,245 + CA264_12155 0.18 -0.6 2,836,020 + +0.6 2,836,149 + CA264_12160 0.27 -3.1 2,836,230 + CA264_12160 0.47 -0.4 2,836,433 + -1.3 2,836,434 - +1.0 2,836,441 + -0.7 2,836,442 - -0.1 2,836,442 - -0.9 2,836,534 + -0.2 2,836,592 + CA264_12165 0.13 -0.4 2,836,837 + CA264_12165 0.32 +0.7 2,836,837 + CA264_12165 0.32 -0.2 2,836,881 + CA264_12165 0.35 -0.7 2,837,115 + CA264_12165 0.53 -0.2 2,837,116 - CA264_12165 0.53 +0.2 2,837,145 + CA264_12165 0.55 -1.0 2,837,145 + CA264_12165 0.55 -0.8 2,837,146 - CA264_12165 0.55 +0.2 2,837,146 - CA264_12165 0.55 -0.6 2,837,175 + CA264_12165 0.57 +1.0 2,837,194 - CA264_12165 0.59 -0.3 2,837,240 + CA264_12165 0.62 -0.1 2,837,339 + CA264_12165 0.70 -0.3 2,837,423 - CA264_12165 0.76 +1.0 2,837,423 - CA264_12165 0.76 -0.4 2,837,424 + CA264_12165 0.76 -1.9 2,837,425 - CA264_12165 0.76 -2.1 2,837,428 + CA264_12165 0.77 -0.1
Or see this region's nucleotide sequence