Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10250 and CA264_10255 are separated by 664 nucleotides CA264_10255 and CA264_10260 are separated by 496 nucleotides
CA264_10250: CA264_10250 - AAA family ATPase, at 2,381,929 to 2,383,383
_10250
CA264_10255: CA264_10255 - hypothetical protein, at 2,384,048 to 2,384,311
_10255
CA264_10260: CA264_10260 - hypothetical protein, at 2,384,808 to 2,386,628
_10260
Position (kb)
2384
2385 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2383.080 kb on - strand, within CA264_10250 at 2383.397 kb on - strand at 2383.406 kb on + strand at 2383.406 kb on + strand at 2383.406 kb on + strand at 2383.407 kb on - strand at 2383.407 kb on - strand at 2383.407 kb on - strand at 2383.407 kb on - strand at 2383.407 kb on - strand at 2383.407 kb on - strand at 2383.407 kb on - strand at 2383.407 kb on - strand at 2383.408 kb on + strand at 2383.408 kb on + strand at 2383.408 kb on + strand at 2383.408 kb on + strand at 2383.408 kb on + strand at 2383.408 kb on + strand at 2383.408 kb on + strand at 2383.408 kb on + strand at 2383.409 kb on - strand at 2383.409 kb on - strand at 2383.409 kb on - strand at 2383.409 kb on - strand at 2383.409 kb on - strand at 2383.409 kb on - strand at 2383.415 kb on - strand at 2383.415 kb on - strand at 2383.463 kb on - strand at 2383.470 kb on + strand at 2383.471 kb on - strand at 2383.493 kb on + strand at 2383.499 kb on - strand at 2383.562 kb on - strand at 2383.636 kb on + strand at 2383.709 kb on + strand at 2383.713 kb on - strand at 2383.716 kb on + strand at 2383.716 kb on + strand at 2383.720 kb on + strand at 2383.721 kb on - strand at 2383.773 kb on + strand at 2383.831 kb on - strand at 2383.863 kb on - strand at 2383.903 kb on + strand at 2383.904 kb on - strand at 2383.907 kb on + strand at 2383.907 kb on + strand at 2383.908 kb on - strand at 2383.908 kb on - strand at 2384.020 kb on + strand at 2384.020 kb on + strand at 2384.020 kb on + strand at 2384.021 kb on - strand at 2384.025 kb on - strand at 2384.035 kb on + strand at 2384.036 kb on - strand at 2384.055 kb on - strand at 2384.061 kb on - strand at 2384.061 kb on - strand at 2384.116 kb on + strand, within CA264_10255 at 2384.145 kb on - strand, within CA264_10255 at 2384.156 kb on + strand, within CA264_10255 at 2384.183 kb on + strand, within CA264_10255 at 2384.307 kb on - strand at 2384.309 kb on + strand at 2384.309 kb on + strand at 2384.310 kb on - strand at 2384.310 kb on - strand at 2384.310 kb on - strand at 2384.310 kb on - strand at 2384.361 kb on - strand at 2384.367 kb on - strand at 2384.370 kb on + strand at 2384.370 kb on + strand at 2384.370 kb on + strand at 2384.370 kb on + strand at 2384.370 kb on + strand at 2384.370 kb on + strand at 2384.370 kb on + strand at 2384.370 kb on + strand at 2384.371 kb on - strand at 2384.371 kb on - strand at 2384.371 kb on - strand at 2384.371 kb on - strand at 2384.371 kb on - strand at 2384.489 kb on - strand at 2384.611 kb on + strand at 2384.617 kb on + strand at 2384.769 kb on - strand at 2384.780 kb on - strand at 2384.845 kb on + strand at 2384.846 kb on - strand at 2384.860 kb on + strand at 2384.860 kb on + strand at 2384.860 kb on + strand at 2384.897 kb on + strand at 2384.897 kb on + strand at 2384.974 kb on + strand at 2384.978 kb on + strand at 2384.994 kb on - strand, within CA264_10260 at 2384.997 kb on - strand, within CA264_10260 at 2385.048 kb on + strand, within CA264_10260 at 2385.049 kb on - strand, within CA264_10260 at 2385.258 kb on + strand, within CA264_10260 at 2385.258 kb on + strand, within CA264_10260 at 2385.259 kb on - strand, within CA264_10260 at 2385.262 kb on + strand, within CA264_10260 at 2385.262 kb on + strand, within CA264_10260 at 2385.263 kb on - strand, within CA264_10260
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 2,383,080 - CA264_10250 0.79 +0.2 2,383,397 - +0.1 2,383,406 + -0.4 2,383,406 + -0.9 2,383,406 + +0.3 2,383,407 - +0.5 2,383,407 - +0.4 2,383,407 - -0.4 2,383,407 - +0.2 2,383,407 - +1.2 2,383,407 - -0.2 2,383,407 - +0.2 2,383,407 - -1.1 2,383,408 + -0.3 2,383,408 + +0.1 2,383,408 + -0.0 2,383,408 + -1.0 2,383,408 + +1.1 2,383,408 + -0.1 2,383,408 + -0.4 2,383,408 + -0.4 2,383,409 - -0.9 2,383,409 - -1.3 2,383,409 - +0.4 2,383,409 - -0.7 2,383,409 - +0.4 2,383,409 - -0.5 2,383,415 - +0.6 2,383,415 - +0.5 2,383,463 - +1.2 2,383,470 + -0.5 2,383,471 - +0.9 2,383,493 + +0.7 2,383,499 - +0.9 2,383,562 - +0.6 2,383,636 + +0.9 2,383,709 + -2.0 2,383,713 - -0.7 2,383,716 + -0.1 2,383,716 + +0.2 2,383,720 + -0.2 2,383,721 - -0.5 2,383,773 + -0.5 2,383,831 - -0.2 2,383,863 - -0.6 2,383,903 + +0.9 2,383,904 - -0.2 2,383,907 + +0.1 2,383,907 + +0.2 2,383,908 - +0.2 2,383,908 - -0.6 2,384,020 + +1.9 2,384,020 + +0.3 2,384,020 + -0.1 2,384,021 - -1.5 2,384,025 - +0.1 2,384,035 + -1.4 2,384,036 - +0.0 2,384,055 - +1.2 2,384,061 - +1.5 2,384,061 - +0.3 2,384,116 + CA264_10255 0.26 +1.6 2,384,145 - CA264_10255 0.37 +0.9 2,384,156 + CA264_10255 0.41 +0.1 2,384,183 + CA264_10255 0.51 -0.1 2,384,307 - -0.2 2,384,309 + +1.9 2,384,309 + -0.5 2,384,310 - -1.4 2,384,310 - -0.9 2,384,310 - +0.3 2,384,310 - -3.1 2,384,361 - -0.2 2,384,367 - +0.2 2,384,370 + -0.6 2,384,370 + +0.7 2,384,370 + +0.6 2,384,370 + -0.3 2,384,370 + -0.5 2,384,370 + -2.1 2,384,370 + -0.3 2,384,370 + -0.1 2,384,371 - +0.3 2,384,371 - +0.3 2,384,371 - -0.1 2,384,371 - +0.2 2,384,371 - -0.4 2,384,489 - -0.4 2,384,611 + -0.8 2,384,617 + -0.5 2,384,769 - -0.2 2,384,780 - -0.4 2,384,845 + +0.2 2,384,846 - -1.1 2,384,860 + -1.6 2,384,860 + +1.1 2,384,860 + +0.7 2,384,897 + +0.4 2,384,897 + +0.2 2,384,974 + -0.8 2,384,978 + -0.6 2,384,994 - CA264_10260 0.10 -1.1 2,384,997 - CA264_10260 0.10 +0.4 2,385,048 + CA264_10260 0.13 +0.0 2,385,049 - CA264_10260 0.13 -0.3 2,385,258 + CA264_10260 0.25 -0.2 2,385,258 + CA264_10260 0.25 +1.9 2,385,259 - CA264_10260 0.25 -1.2 2,385,262 + CA264_10260 0.25 +0.0 2,385,262 + CA264_10260 0.25 -0.3 2,385,263 - CA264_10260 0.25 +1.5
Or see this region's nucleotide sequence