Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08605 and CA264_08610 are separated by 225 nucleotides CA264_08610 and CA264_08615 overlap by 4 nucleotides CA264_08615 and CA264_08620 are separated by 79 nucleotides
CA264_08605: CA264_08605 - S1/P1 Nuclease, at 1,998,129 to 1,998,896
_08605
CA264_08610: CA264_08610 - NCS2 family permease, at 1,999,122 to 2,000,426
_08610
CA264_08615: CA264_08615 - hypothetical protein, at 2,000,423 to 2,000,608
_08615
CA264_08620: CA264_08620 - hypothetical protein, at 2,000,688 to 2,001,353
_08620
Position (kb)
1999
2000
2001 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1998.123 kb on - strand at 1998.139 kb on + strand at 1998.345 kb on - strand, within CA264_08605 at 1998.345 kb on - strand, within CA264_08605 at 1998.552 kb on + strand, within CA264_08605 at 1998.594 kb on + strand, within CA264_08605 at 1998.644 kb on + strand, within CA264_08605 at 1998.771 kb on + strand, within CA264_08605 at 1998.771 kb on + strand, within CA264_08605 at 1998.772 kb on - strand, within CA264_08605 at 1998.772 kb on - strand, within CA264_08605 at 1998.772 kb on - strand, within CA264_08605 at 1998.772 kb on - strand, within CA264_08605 at 1998.822 kb on + strand at 1998.823 kb on - strand at 1998.915 kb on + strand at 1998.916 kb on - strand at 1999.020 kb on - strand at 1999.102 kb on - strand at 1999.132 kb on - strand at 1999.209 kb on + strand at 1999.209 kb on + strand at 1999.210 kb on - strand at 1999.214 kb on + strand at 1999.215 kb on - strand at 1999.220 kb on - strand at 1999.229 kb on + strand at 1999.308 kb on - strand, within CA264_08610 at 1999.377 kb on + strand, within CA264_08610 at 1999.378 kb on - strand, within CA264_08610 at 1999.485 kb on - strand, within CA264_08610 at 1999.599 kb on - strand, within CA264_08610 at 1999.634 kb on + strand, within CA264_08610 at 1999.635 kb on - strand, within CA264_08610 at 1999.635 kb on - strand, within CA264_08610 at 1999.658 kb on - strand, within CA264_08610 at 2000.066 kb on - strand, within CA264_08610 at 2000.066 kb on - strand, within CA264_08610 at 2000.091 kb on - strand, within CA264_08610 at 2000.202 kb on - strand, within CA264_08610 at 2000.225 kb on - strand, within CA264_08610 at 2000.234 kb on + strand, within CA264_08610 at 2000.285 kb on + strand, within CA264_08610 at 2000.286 kb on - strand, within CA264_08610 at 2000.290 kb on - strand, within CA264_08610 at 2000.309 kb on + strand at 2000.424 kb on + strand at 2000.424 kb on + strand at 2000.424 kb on + strand at 2000.424 kb on + strand at 2000.425 kb on - strand at 2000.524 kb on - strand, within CA264_08615 at 2000.524 kb on - strand, within CA264_08615 at 2000.524 kb on - strand, within CA264_08615 at 2000.565 kb on + strand, within CA264_08615 at 2000.565 kb on + strand, within CA264_08615 at 2000.565 kb on + strand, within CA264_08615 at 2000.566 kb on - strand, within CA264_08615 at 2000.615 kb on + strand at 2000.616 kb on - strand at 2000.687 kb on + strand at 2000.738 kb on - strand at 2000.751 kb on - strand at 2000.798 kb on + strand, within CA264_08620 at 2000.842 kb on + strand, within CA264_08620 at 2000.894 kb on - strand, within CA264_08620 at 2001.096 kb on + strand, within CA264_08620 at 2001.097 kb on - strand, within CA264_08620 at 2001.157 kb on + strand, within CA264_08620 at 2001.158 kb on - strand, within CA264_08620 at 2001.179 kb on - strand, within CA264_08620 at 2001.235 kb on - strand, within CA264_08620 at 2001.235 kb on - strand, within CA264_08620 at 2001.352 kb on - strand at 2001.366 kb on - strand at 2001.391 kb on - strand at 2001.423 kb on + strand at 2001.423 kb on + strand at 2001.423 kb on + strand at 2001.424 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,998,123 - +0.4 1,998,139 + -0.5 1,998,345 - CA264_08605 0.28 -2.1 1,998,345 - CA264_08605 0.28 -0.9 1,998,552 + CA264_08605 0.55 -0.1 1,998,594 + CA264_08605 0.61 +1.2 1,998,644 + CA264_08605 0.67 -0.2 1,998,771 + CA264_08605 0.84 +0.9 1,998,771 + CA264_08605 0.84 -0.6 1,998,772 - CA264_08605 0.84 -0.6 1,998,772 - CA264_08605 0.84 -0.7 1,998,772 - CA264_08605 0.84 -0.8 1,998,772 - CA264_08605 0.84 +0.5 1,998,822 + -1.1 1,998,823 - -0.6 1,998,915 + -0.9 1,998,916 - -0.2 1,999,020 - -0.1 1,999,102 - -2.4 1,999,132 - -0.2 1,999,209 + +0.0 1,999,209 + +0.7 1,999,210 - +0.3 1,999,214 + -1.9 1,999,215 - +2.5 1,999,220 - +0.2 1,999,229 + -0.1 1,999,308 - CA264_08610 0.14 +0.3 1,999,377 + CA264_08610 0.20 -0.1 1,999,378 - CA264_08610 0.20 -0.1 1,999,485 - CA264_08610 0.28 -0.9 1,999,599 - CA264_08610 0.37 -0.4 1,999,634 + CA264_08610 0.39 +0.9 1,999,635 - CA264_08610 0.39 -0.9 1,999,635 - CA264_08610 0.39 -0.1 1,999,658 - CA264_08610 0.41 +0.8 2,000,066 - CA264_08610 0.72 -0.9 2,000,066 - CA264_08610 0.72 +0.6 2,000,091 - CA264_08610 0.74 +0.2 2,000,202 - CA264_08610 0.83 -0.6 2,000,225 - CA264_08610 0.85 -2.7 2,000,234 + CA264_08610 0.85 -0.7 2,000,285 + CA264_08610 0.89 -0.1 2,000,286 - CA264_08610 0.89 +0.1 2,000,290 - CA264_08610 0.90 -0.2 2,000,309 + -0.3 2,000,424 + -0.1 2,000,424 + -0.1 2,000,424 + +2.4 2,000,424 + +0.9 2,000,425 - -0.6 2,000,524 - CA264_08615 0.54 +0.1 2,000,524 - CA264_08615 0.54 -0.3 2,000,524 - CA264_08615 0.54 +0.7 2,000,565 + CA264_08615 0.76 -0.7 2,000,565 + CA264_08615 0.76 +0.5 2,000,565 + CA264_08615 0.76 +0.4 2,000,566 - CA264_08615 0.77 +0.2 2,000,615 + -0.2 2,000,616 - -0.4 2,000,687 + -0.2 2,000,738 - -0.1 2,000,751 - +0.6 2,000,798 + CA264_08620 0.17 -0.1 2,000,842 + CA264_08620 0.23 +0.3 2,000,894 - CA264_08620 0.31 +0.9 2,001,096 + CA264_08620 0.61 -0.4 2,001,097 - CA264_08620 0.61 +1.3 2,001,157 + CA264_08620 0.70 +0.2 2,001,158 - CA264_08620 0.71 -0.1 2,001,179 - CA264_08620 0.74 -0.2 2,001,235 - CA264_08620 0.82 +0.0 2,001,235 - CA264_08620 0.82 +0.1 2,001,352 - -0.7 2,001,366 - +1.3 2,001,391 - +0.3 2,001,423 + +2.2 2,001,423 + -0.1 2,001,423 + -1.9 2,001,424 - +1.1
Or see this region's nucleotide sequence