Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08150 and CA264_08155 are separated by 66 nucleotides CA264_08155 and CA264_08160 are separated by 42 nucleotides CA264_08160 and CA264_08165 are separated by 236 nucleotides
CA264_08150: CA264_08150 - radical SAM protein, at 1,881,572 to 1,882,636
_08150
CA264_08155: CA264_08155 - hypothetical protein, at 1,882,703 to 1,883,545
_08155
CA264_08160: CA264_08160 - catalase, at 1,883,588 to 1,884,475
_08160
CA264_08165: CA264_08165 - FRG domain-containing protein, at 1,884,712 to 1,885,503
_08165
Position (kb)
1883
1884
1885 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1882.589 kb on + strand at 1882.590 kb on - strand at 1882.697 kb on + strand at 1882.697 kb on + strand at 1882.697 kb on + strand at 1882.697 kb on + strand at 1882.698 kb on - strand at 1882.698 kb on - strand at 1882.698 kb on - strand at 1882.698 kb on - strand at 1882.702 kb on + strand at 1882.703 kb on - strand at 1882.744 kb on - strand at 1882.903 kb on - strand, within CA264_08155 at 1882.952 kb on - strand, within CA264_08155 at 1883.175 kb on - strand, within CA264_08155 at 1883.179 kb on + strand, within CA264_08155 at 1883.180 kb on - strand, within CA264_08155 at 1883.183 kb on + strand, within CA264_08155 at 1883.321 kb on + strand, within CA264_08155 at 1883.367 kb on + strand, within CA264_08155 at 1883.407 kb on + strand, within CA264_08155 at 1883.414 kb on - strand, within CA264_08155 at 1883.432 kb on + strand, within CA264_08155 at 1883.441 kb on + strand, within CA264_08155 at 1883.441 kb on + strand, within CA264_08155 at 1883.442 kb on - strand, within CA264_08155 at 1883.544 kb on - strand at 1883.581 kb on + strand at 1883.581 kb on + strand at 1883.582 kb on - strand at 1883.583 kb on + strand at 1883.589 kb on + strand at 1883.589 kb on + strand at 1883.686 kb on + strand, within CA264_08160 at 1883.826 kb on + strand, within CA264_08160 at 1883.830 kb on + strand, within CA264_08160 at 1883.831 kb on - strand, within CA264_08160 at 1884.048 kb on + strand, within CA264_08160 at 1884.049 kb on - strand, within CA264_08160 at 1884.049 kb on - strand, within CA264_08160 at 1884.052 kb on + strand, within CA264_08160 at 1884.052 kb on + strand, within CA264_08160 at 1884.052 kb on + strand at 1884.053 kb on - strand, within CA264_08160 at 1884.053 kb on - strand, within CA264_08160 at 1884.053 kb on - strand, within CA264_08160 at 1884.053 kb on - strand, within CA264_08160 at 1884.110 kb on - strand, within CA264_08160 at 1884.117 kb on - strand, within CA264_08160 at 1884.117 kb on - strand, within CA264_08160 at 1884.132 kb on - strand, within CA264_08160 at 1884.190 kb on + strand, within CA264_08160 at 1884.368 kb on + strand, within CA264_08160 at 1884.380 kb on + strand, within CA264_08160 at 1884.380 kb on + strand, within CA264_08160 at 1884.380 kb on + strand, within CA264_08160 at 1884.381 kb on - strand, within CA264_08160 at 1884.381 kb on - strand, within CA264_08160 at 1884.401 kb on + strand at 1884.460 kb on + strand at 1884.461 kb on - strand at 1884.476 kb on - strand at 1884.476 kb on - strand at 1884.482 kb on - strand at 1884.489 kb on - strand at 1884.489 kb on - strand at 1884.493 kb on + strand at 1884.493 kb on + strand at 1884.551 kb on - strand at 1884.555 kb on - strand at 1884.555 kb on - strand at 1884.555 kb on - strand at 1884.650 kb on + strand at 1884.680 kb on + strand at 1884.734 kb on + strand at 1884.795 kb on - strand, within CA264_08165 at 1884.814 kb on + strand, within CA264_08165 at 1884.814 kb on + strand, within CA264_08165 at 1884.815 kb on - strand, within CA264_08165 at 1885.022 kb on - strand, within CA264_08165 at 1885.022 kb on - strand, within CA264_08165 at 1885.034 kb on + strand, within CA264_08165 at 1885.035 kb on - strand, within CA264_08165 at 1885.035 kb on - strand, within CA264_08165 at 1885.035 kb on - strand, within CA264_08165 at 1885.099 kb on - strand, within CA264_08165 at 1885.102 kb on + strand, within CA264_08165 at 1885.240 kb on + strand, within CA264_08165 at 1885.240 kb on + strand, within CA264_08165 at 1885.240 kb on + strand, within CA264_08165 at 1885.241 kb on - strand, within CA264_08165 at 1885.291 kb on + strand, within CA264_08165 at 1885.291 kb on + strand, within CA264_08165 at 1885.335 kb on + strand, within CA264_08165
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,882,589 + -2.1 1,882,590 - -0.8 1,882,697 + -0.2 1,882,697 + +0.4 1,882,697 + +0.3 1,882,697 + -0.1 1,882,698 - -0.7 1,882,698 - +0.1 1,882,698 - -0.7 1,882,698 - -0.7 1,882,702 + -1.4 1,882,703 - +0.8 1,882,744 - -0.7 1,882,903 - CA264_08155 0.24 -1.7 1,882,952 - CA264_08155 0.30 +0.3 1,883,175 - CA264_08155 0.56 +1.3 1,883,179 + CA264_08155 0.56 +0.3 1,883,180 - CA264_08155 0.57 -0.6 1,883,183 + CA264_08155 0.57 +0.5 1,883,321 + CA264_08155 0.73 +0.0 1,883,367 + CA264_08155 0.79 -0.8 1,883,407 + CA264_08155 0.84 -1.8 1,883,414 - CA264_08155 0.84 -0.7 1,883,432 + CA264_08155 0.86 +0.6 1,883,441 + CA264_08155 0.88 -0.5 1,883,441 + CA264_08155 0.88 -0.7 1,883,442 - CA264_08155 0.88 +0.5 1,883,544 - -0.9 1,883,581 + -0.7 1,883,581 + -1.3 1,883,582 - +0.2 1,883,583 + -1.0 1,883,589 + -0.8 1,883,589 + +0.9 1,883,686 + CA264_08160 0.11 -0.3 1,883,826 + CA264_08160 0.27 +0.5 1,883,830 + CA264_08160 0.27 -1.7 1,883,831 - CA264_08160 0.27 +0.1 1,884,048 + CA264_08160 0.52 +0.4 1,884,049 - CA264_08160 0.52 +0.4 1,884,049 - CA264_08160 0.52 -1.1 1,884,052 + CA264_08160 0.52 +0.6 1,884,052 + CA264_08160 0.52 -0.3 1,884,052 + +2.2 1,884,053 - CA264_08160 0.52 -0.1 1,884,053 - CA264_08160 0.52 +0.7 1,884,053 - CA264_08160 0.52 -0.6 1,884,053 - CA264_08160 0.52 -0.6 1,884,110 - CA264_08160 0.59 +1.2 1,884,117 - CA264_08160 0.60 -0.2 1,884,117 - CA264_08160 0.60 +0.2 1,884,132 - CA264_08160 0.61 -1.1 1,884,190 + CA264_08160 0.68 +0.4 1,884,368 + CA264_08160 0.88 -2.6 1,884,380 + CA264_08160 0.89 -0.8 1,884,380 + CA264_08160 0.89 -0.7 1,884,380 + CA264_08160 0.89 +1.5 1,884,381 - CA264_08160 0.89 +0.9 1,884,381 - CA264_08160 0.89 +1.5 1,884,401 + -0.3 1,884,460 + -0.4 1,884,461 - -1.1 1,884,476 - +0.2 1,884,476 - -0.5 1,884,482 - +0.3 1,884,489 - -0.2 1,884,489 - -0.4 1,884,493 + +0.2 1,884,493 + -0.8 1,884,551 - -0.6 1,884,555 - -0.4 1,884,555 - +0.2 1,884,555 - -0.4 1,884,650 + -1.1 1,884,680 + +0.6 1,884,734 + -0.2 1,884,795 - CA264_08165 0.10 -0.6 1,884,814 + CA264_08165 0.13 -0.0 1,884,814 + CA264_08165 0.13 -0.7 1,884,815 - CA264_08165 0.13 -1.4 1,885,022 - CA264_08165 0.39 +0.6 1,885,022 - CA264_08165 0.39 -0.0 1,885,034 + CA264_08165 0.41 -0.2 1,885,035 - CA264_08165 0.41 +1.0 1,885,035 - CA264_08165 0.41 -0.2 1,885,035 - CA264_08165 0.41 +0.6 1,885,099 - CA264_08165 0.49 +0.3 1,885,102 + CA264_08165 0.49 -0.1 1,885,240 + CA264_08165 0.67 -0.1 1,885,240 + CA264_08165 0.67 -0.1 1,885,240 + CA264_08165 0.67 -1.4 1,885,241 - CA264_08165 0.67 +0.3 1,885,291 + CA264_08165 0.73 +1.6 1,885,291 + CA264_08165 0.73 -0.2 1,885,335 + CA264_08165 0.79 +1.5
Or see this region's nucleotide sequence