Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07375 and CA264_07380 are separated by 91 nucleotides CA264_07380 and CA264_07385 are separated by 224 nucleotides CA264_07385 and CA264_07390 are separated by 102 nucleotides CA264_07390 and CA264_07395 are separated by 24 nucleotides
CA264_07375: CA264_07375 - NADH-dependent alcohol dehydrogenase, at 1,700,069 to 1,701,226
_07375
CA264_07380: CA264_07380 - NADP-dependent oxidoreductase, at 1,701,318 to 1,702,331
_07380
CA264_07385: CA264_07385 - 50S ribosomal protein L20, at 1,702,556 to 1,702,900
_07385
CA264_07390: CA264_07390 - 50S ribosomal protein L35, at 1,703,003 to 1,703,197
_07390
CA264_07395: CA264_07395 - translation initiation factor IF-3, at 1,703,222 to 1,703,743
_07395
Position (kb)
1701
1702
1703 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1700.348 kb on - strand, within CA264_07375 at 1700.430 kb on + strand, within CA264_07375 at 1700.515 kb on + strand, within CA264_07375 at 1700.520 kb on + strand, within CA264_07375 at 1700.625 kb on + strand, within CA264_07375 at 1700.626 kb on - strand, within CA264_07375 at 1700.690 kb on - strand, within CA264_07375 at 1700.690 kb on - strand, within CA264_07375 at 1700.765 kb on - strand, within CA264_07375 at 1700.821 kb on + strand, within CA264_07375 at 1700.933 kb on + strand, within CA264_07375 at 1700.952 kb on - strand, within CA264_07375 at 1700.993 kb on + strand, within CA264_07375 at 1700.993 kb on + strand, within CA264_07375 at 1700.993 kb on + strand, within CA264_07375 at 1701.015 kb on + strand, within CA264_07375 at 1701.041 kb on - strand, within CA264_07375 at 1701.055 kb on - strand, within CA264_07375 at 1701.121 kb on - strand at 1701.162 kb on - strand at 1701.208 kb on - strand at 1701.233 kb on + strand at 1701.236 kb on + strand at 1701.245 kb on + strand at 1701.258 kb on + strand at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.288 kb on + strand at 1701.289 kb on - strand at 1701.289 kb on - strand at 1701.299 kb on + strand at 1701.300 kb on - strand at 1701.313 kb on + strand at 1701.505 kb on - strand, within CA264_07380 at 1701.584 kb on + strand, within CA264_07380 at 1701.586 kb on + strand, within CA264_07380 at 1701.587 kb on - strand, within CA264_07380 at 1701.587 kb on - strand, within CA264_07380 at 1701.589 kb on + strand, within CA264_07380 at 1701.590 kb on - strand, within CA264_07380 at 1701.640 kb on + strand, within CA264_07380 at 1701.641 kb on - strand, within CA264_07380 at 1701.655 kb on - strand, within CA264_07380 at 1701.679 kb on + strand, within CA264_07380 at 1701.679 kb on + strand, within CA264_07380 at 1701.680 kb on - strand, within CA264_07380 at 1701.680 kb on - strand, within CA264_07380 at 1701.682 kb on - strand, within CA264_07380 at 1701.682 kb on - strand, within CA264_07380 at 1701.741 kb on - strand, within CA264_07380 at 1702.115 kb on + strand, within CA264_07380 at 1702.115 kb on + strand, within CA264_07380 at 1702.124 kb on + strand, within CA264_07380 at 1702.128 kb on - strand, within CA264_07380 at 1702.144 kb on + strand, within CA264_07380 at 1702.145 kb on - strand, within CA264_07380 at 1702.156 kb on + strand, within CA264_07380 at 1702.156 kb on + strand, within CA264_07380 at 1702.157 kb on - strand, within CA264_07380 at 1702.157 kb on - strand, within CA264_07380 at 1702.163 kb on + strand, within CA264_07380 at 1702.163 kb on + strand, within CA264_07380 at 1702.190 kb on - strand, within CA264_07380 at 1702.208 kb on - strand, within CA264_07380 at 1702.312 kb on - strand at 1702.314 kb on - strand at 1702.314 kb on - strand at 1702.316 kb on + strand at 1702.317 kb on - strand at 1702.317 kb on - strand at 1702.317 kb on - strand at 1702.317 kb on - strand at 1702.322 kb on + strand at 1702.354 kb on + strand at 1702.410 kb on - strand at 1702.425 kb on - strand at 1702.429 kb on - strand at 1702.447 kb on + strand at 1702.494 kb on + strand at 1702.495 kb on - strand at 1702.542 kb on - strand at 1702.542 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,700,348 - CA264_07375 0.24 +0.1 1,700,430 + CA264_07375 0.31 -1.1 1,700,515 + CA264_07375 0.39 -1.0 1,700,520 + CA264_07375 0.39 -0.3 1,700,625 + CA264_07375 0.48 +0.6 1,700,626 - CA264_07375 0.48 -1.2 1,700,690 - CA264_07375 0.54 -0.5 1,700,690 - CA264_07375 0.54 +0.3 1,700,765 - CA264_07375 0.60 +0.3 1,700,821 + CA264_07375 0.65 +0.1 1,700,933 + CA264_07375 0.75 -1.0 1,700,952 - CA264_07375 0.76 -0.1 1,700,993 + CA264_07375 0.80 -0.3 1,700,993 + CA264_07375 0.80 +0.1 1,700,993 + CA264_07375 0.80 -1.9 1,701,015 + CA264_07375 0.82 -0.2 1,701,041 - CA264_07375 0.84 +0.4 1,701,055 - CA264_07375 0.85 -0.1 1,701,121 - +0.3 1,701,162 - +0.4 1,701,208 - +0.1 1,701,233 + -1.1 1,701,236 + +1.0 1,701,245 + +0.3 1,701,258 + -0.4 1,701,282 + -2.8 1,701,282 + -0.6 1,701,283 - +0.4 1,701,283 - -0.4 1,701,283 - -0.0 1,701,288 + -2.3 1,701,289 - -0.6 1,701,289 - -0.5 1,701,299 + +1.1 1,701,300 - -0.5 1,701,313 + -0.0 1,701,505 - CA264_07380 0.18 -1.7 1,701,584 + CA264_07380 0.26 -0.1 1,701,586 + CA264_07380 0.26 -0.1 1,701,587 - CA264_07380 0.27 +0.1 1,701,587 - CA264_07380 0.27 -0.2 1,701,589 + CA264_07380 0.27 -0.2 1,701,590 - CA264_07380 0.27 -0.7 1,701,640 + CA264_07380 0.32 -0.2 1,701,641 - CA264_07380 0.32 -0.1 1,701,655 - CA264_07380 0.33 -1.0 1,701,679 + CA264_07380 0.36 +0.0 1,701,679 + CA264_07380 0.36 +0.6 1,701,680 - CA264_07380 0.36 -1.1 1,701,680 - CA264_07380 0.36 -0.2 1,701,682 - CA264_07380 0.36 +0.2 1,701,682 - CA264_07380 0.36 +1.2 1,701,741 - CA264_07380 0.42 -0.1 1,702,115 + CA264_07380 0.79 -2.3 1,702,115 + CA264_07380 0.79 +0.1 1,702,124 + CA264_07380 0.79 -0.8 1,702,128 - CA264_07380 0.80 -1.3 1,702,144 + CA264_07380 0.81 +0.5 1,702,145 - CA264_07380 0.82 -0.8 1,702,156 + CA264_07380 0.83 -0.7 1,702,156 + CA264_07380 0.83 +0.6 1,702,157 - CA264_07380 0.83 -0.9 1,702,157 - CA264_07380 0.83 -0.0 1,702,163 + CA264_07380 0.83 +0.3 1,702,163 + CA264_07380 0.83 +0.9 1,702,190 - CA264_07380 0.86 -0.4 1,702,208 - CA264_07380 0.88 +0.5 1,702,312 - +0.5 1,702,314 - -0.7 1,702,314 - +1.5 1,702,316 + -0.8 1,702,317 - -0.2 1,702,317 - +1.9 1,702,317 - -0.7 1,702,317 - -0.4 1,702,322 + -1.2 1,702,354 + -0.3 1,702,410 - -0.0 1,702,425 - -1.1 1,702,429 - -0.4 1,702,447 + +0.0 1,702,494 + -0.3 1,702,495 - +0.4 1,702,542 - -0.7 1,702,542 - -1.1
Or see this region's nucleotide sequence