Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06065 and CA264_06070 are separated by 84 nucleotides CA264_06070 and CA264_06075 are separated by 104 nucleotides CA264_06075 and CA264_06080 are separated by 187 nucleotides
CA264_06065: CA264_06065 - aminotransferase, at 1,418,752 to 1,419,966
_06065
CA264_06070: CA264_06070 - kinase, at 1,420,051 to 1,420,506
_06070
CA264_06075: CA264_06075 - NAD-dependent deacylase, at 1,420,611 to 1,421,306
_06075
CA264_06080: CA264_06080 - hypothetical protein, at 1,421,494 to 1,423,770
_06080
Position (kb)
1420
1421
1422 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1419.718 kb on - strand, within CA264_06065 at 1419.718 kb on - strand, within CA264_06065 at 1419.718 kb on - strand, within CA264_06065 at 1419.718 kb on - strand, within CA264_06065 at 1419.749 kb on - strand, within CA264_06065 at 1419.770 kb on + strand, within CA264_06065 at 1419.859 kb on + strand at 1419.859 kb on + strand at 1419.870 kb on + strand at 1419.908 kb on + strand at 1419.908 kb on + strand at 1419.930 kb on - strand at 1419.962 kb on - strand at 1419.962 kb on - strand at 1419.988 kb on - strand at 1420.053 kb on - strand at 1420.131 kb on - strand, within CA264_06070 at 1420.266 kb on + strand, within CA264_06070 at 1420.266 kb on + strand, within CA264_06070 at 1420.301 kb on + strand, within CA264_06070 at 1420.462 kb on - strand at 1420.527 kb on + strand at 1420.528 kb on - strand at 1420.528 kb on - strand at 1420.528 kb on - strand at 1420.529 kb on + strand at 1420.529 kb on + strand at 1420.529 kb on + strand at 1420.530 kb on - strand at 1420.534 kb on - strand at 1420.611 kb on - strand at 1420.646 kb on + strand at 1420.649 kb on - strand at 1420.797 kb on - strand, within CA264_06075 at 1420.912 kb on + strand, within CA264_06075 at 1420.913 kb on - strand, within CA264_06075 at 1420.913 kb on - strand, within CA264_06075 at 1420.972 kb on - strand, within CA264_06075 at 1421.067 kb on - strand, within CA264_06075 at 1421.067 kb on - strand, within CA264_06075 at 1421.137 kb on + strand, within CA264_06075 at 1421.138 kb on - strand, within CA264_06075 at 1421.138 kb on - strand, within CA264_06075 at 1421.139 kb on + strand, within CA264_06075 at 1421.139 kb on + strand, within CA264_06075 at 1421.139 kb on + strand, within CA264_06075 at 1421.140 kb on - strand, within CA264_06075 at 1421.264 kb on + strand at 1421.265 kb on - strand at 1421.265 kb on - strand at 1421.393 kb on - strand at 1421.399 kb on - strand at 1421.399 kb on - strand at 1421.404 kb on - strand at 1421.424 kb on + strand at 1421.424 kb on + strand at 1421.424 kb on + strand at 1421.424 kb on + strand at 1421.424 kb on + strand at 1421.426 kb on + strand at 1421.426 kb on + strand at 1421.426 kb on + strand at 1421.426 kb on + strand at 1421.428 kb on + strand at 1421.428 kb on + strand at 1421.428 kb on + strand at 1421.428 kb on + strand at 1421.428 kb on + strand at 1421.469 kb on + strand at 1421.504 kb on + strand at 1421.504 kb on + strand at 1421.507 kb on + strand at 1421.507 kb on + strand at 1421.507 kb on + strand at 1421.539 kb on - strand at 1421.602 kb on + strand at 1421.719 kb on + strand at 1421.742 kb on - strand, within CA264_06080 at 1421.973 kb on + strand, within CA264_06080 at 1421.973 kb on + strand, within CA264_06080 at 1421.974 kb on - strand, within CA264_06080 at 1422.013 kb on + strand, within CA264_06080 at 1422.014 kb on - strand, within CA264_06080 at 1422.067 kb on + strand, within CA264_06080 at 1422.139 kb on + strand, within CA264_06080 at 1422.279 kb on + strand, within CA264_06080
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,419,718 - CA264_06065 0.80 +0.4 1,419,718 - CA264_06065 0.80 -2.1 1,419,718 - CA264_06065 0.80 -1.1 1,419,718 - CA264_06065 0.80 -0.1 1,419,749 - CA264_06065 0.82 -0.1 1,419,770 + CA264_06065 0.84 -0.3 1,419,859 + +1.5 1,419,859 + -0.0 1,419,870 + -0.1 1,419,908 + -1.1 1,419,908 + -0.2 1,419,930 - -0.3 1,419,962 - +0.6 1,419,962 - -0.7 1,419,988 - -2.7 1,420,053 - -0.4 1,420,131 - CA264_06070 0.18 +0.5 1,420,266 + CA264_06070 0.47 +2.3 1,420,266 + CA264_06070 0.47 -1.4 1,420,301 + CA264_06070 0.55 +0.6 1,420,462 - -2.1 1,420,527 + +0.0 1,420,528 - +0.3 1,420,528 - -1.3 1,420,528 - -0.3 1,420,529 + -1.7 1,420,529 + -0.4 1,420,529 + +0.4 1,420,530 - -0.6 1,420,534 - -0.3 1,420,611 - -0.1 1,420,646 + -0.7 1,420,649 - +0.9 1,420,797 - CA264_06075 0.27 +1.9 1,420,912 + CA264_06075 0.43 -0.4 1,420,913 - CA264_06075 0.43 -1.0 1,420,913 - CA264_06075 0.43 -0.4 1,420,972 - CA264_06075 0.52 -0.1 1,421,067 - CA264_06075 0.66 +0.4 1,421,067 - CA264_06075 0.66 +1.1 1,421,137 + CA264_06075 0.76 -0.2 1,421,138 - CA264_06075 0.76 +1.3 1,421,138 - CA264_06075 0.76 -0.5 1,421,139 + CA264_06075 0.76 -0.1 1,421,139 + CA264_06075 0.76 +1.2 1,421,139 + CA264_06075 0.76 -0.7 1,421,140 - CA264_06075 0.76 +0.4 1,421,264 + +0.1 1,421,265 - +0.1 1,421,265 - +0.2 1,421,393 - +0.9 1,421,399 - +0.3 1,421,399 - +0.9 1,421,404 - +0.6 1,421,424 + +0.4 1,421,424 + +0.6 1,421,424 + +0.7 1,421,424 + +0.2 1,421,424 + +0.4 1,421,426 + +0.7 1,421,426 + -0.1 1,421,426 + +0.5 1,421,426 + +0.4 1,421,428 + +0.3 1,421,428 + +0.8 1,421,428 + +0.3 1,421,428 + +0.6 1,421,428 + +0.3 1,421,469 + +0.4 1,421,504 + +0.2 1,421,504 + -0.4 1,421,507 + +0.3 1,421,507 + +1.4 1,421,507 + +0.1 1,421,539 - -0.6 1,421,602 + +0.9 1,421,719 + -0.2 1,421,742 - CA264_06080 0.11 -2.1 1,421,973 + CA264_06080 0.21 +0.5 1,421,973 + CA264_06080 0.21 -0.5 1,421,974 - CA264_06080 0.21 +1.6 1,422,013 + CA264_06080 0.23 -0.7 1,422,014 - CA264_06080 0.23 -1.3 1,422,067 + CA264_06080 0.25 +0.4 1,422,139 + CA264_06080 0.28 -1.3 1,422,279 + CA264_06080 0.34 -0.6
Or see this region's nucleotide sequence