Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05790 and CA264_05795 are separated by 214 nucleotides CA264_05795 and CA264_05800 are separated by 271 nucleotides CA264_05800 and CA264_05805 are separated by 48 nucleotides
CA264_05790: CA264_05790 - heavy metal translocating P-type ATPase, at 1,347,489 to 1,349,894
_05790
CA264_05795: CA264_05795 - hypothetical protein, at 1,350,109 to 1,350,561
_05795
CA264_05800: CA264_05800 - hypothetical protein, at 1,350,833 to 1,351,381
_05800
CA264_05805: CA264_05805 - hypothetical protein, at 1,351,430 to 1,353,190
_05805
Position (kb)
1350
1351
1352 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1349.908 kb on + strand at 1349.978 kb on - strand at 1349.978 kb on - strand at 1349.992 kb on + strand at 1350.003 kb on + strand at 1350.102 kb on - strand at 1350.116 kb on + strand at 1350.132 kb on - strand at 1350.155 kb on + strand, within CA264_05795 at 1350.404 kb on + strand, within CA264_05795 at 1350.404 kb on + strand, within CA264_05795 at 1350.404 kb on + strand, within CA264_05795 at 1350.404 kb on + strand, within CA264_05795 at 1350.405 kb on - strand, within CA264_05795 at 1350.405 kb on - strand, within CA264_05795 at 1350.448 kb on + strand, within CA264_05795 at 1350.448 kb on + strand, within CA264_05795 at 1350.449 kb on - strand, within CA264_05795 at 1350.464 kb on + strand, within CA264_05795 at 1350.464 kb on + strand, within CA264_05795 at 1350.487 kb on - strand, within CA264_05795 at 1350.537 kb on - strand at 1350.537 kb on - strand at 1350.560 kb on - strand at 1350.560 kb on - strand at 1350.560 kb on - strand at 1350.568 kb on - strand at 1350.570 kb on - strand at 1350.570 kb on - strand at 1350.570 kb on - strand at 1350.579 kb on + strand at 1350.579 kb on + strand at 1350.580 kb on - strand at 1350.590 kb on + strand at 1350.605 kb on + strand at 1350.641 kb on - strand at 1350.644 kb on + strand at 1350.645 kb on - strand at 1350.820 kb on + strand at 1350.820 kb on + strand at 1350.820 kb on + strand at 1350.821 kb on - strand at 1350.824 kb on - strand at 1350.824 kb on - strand at 1350.824 kb on - strand at 1350.825 kb on + strand at 1350.825 kb on + strand at 1350.840 kb on - strand at 1350.996 kb on + strand, within CA264_05800 at 1350.997 kb on - strand, within CA264_05800 at 1350.997 kb on - strand, within CA264_05800 at 1351.043 kb on - strand, within CA264_05800 at 1351.092 kb on - strand, within CA264_05800 at 1351.112 kb on + strand, within CA264_05800 at 1351.137 kb on - strand, within CA264_05800 at 1351.193 kb on + strand, within CA264_05800 at 1351.193 kb on + strand, within CA264_05800 at 1351.194 kb on - strand, within CA264_05800 at 1351.208 kb on + strand, within CA264_05800 at 1351.209 kb on - strand, within CA264_05800 at 1351.287 kb on - strand, within CA264_05800 at 1351.359 kb on - strand at 1351.398 kb on - strand at 1351.470 kb on + strand at 1351.474 kb on + strand at 1351.475 kb on - strand at 1351.519 kb on + strand at 1351.524 kb on + strand at 1351.533 kb on + strand at 1351.533 kb on + strand at 1351.534 kb on - strand at 1351.542 kb on - strand at 1351.559 kb on - strand at 1351.588 kb on + strand at 1351.635 kb on + strand, within CA264_05805 at 1351.735 kb on - strand, within CA264_05805 at 1351.735 kb on - strand, within CA264_05805 at 1351.847 kb on - strand, within CA264_05805 at 1351.963 kb on + strand, within CA264_05805 at 1351.984 kb on - strand, within CA264_05805 at 1352.001 kb on + strand, within CA264_05805 at 1352.001 kb on + strand, within CA264_05805 at 1352.054 kb on - strand, within CA264_05805 at 1352.118 kb on + strand, within CA264_05805 at 1352.118 kb on + strand, within CA264_05805 at 1352.118 kb on + strand, within CA264_05805 at 1352.119 kb on - strand, within CA264_05805 at 1352.119 kb on - strand, within CA264_05805 at 1352.124 kb on + strand, within CA264_05805 at 1352.125 kb on - strand, within CA264_05805 at 1352.131 kb on + strand, within CA264_05805
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,349,908 + +0.3 1,349,978 - +0.9 1,349,978 - -0.4 1,349,992 + -0.4 1,350,003 + -0.7 1,350,102 - +0.6 1,350,116 + -0.4 1,350,132 - -0.9 1,350,155 + CA264_05795 0.10 -0.5 1,350,404 + CA264_05795 0.65 -0.1 1,350,404 + CA264_05795 0.65 -0.6 1,350,404 + CA264_05795 0.65 +1.5 1,350,404 + CA264_05795 0.65 +2.9 1,350,405 - CA264_05795 0.65 -0.4 1,350,405 - CA264_05795 0.65 +0.5 1,350,448 + CA264_05795 0.75 +1.6 1,350,448 + CA264_05795 0.75 -2.1 1,350,449 - CA264_05795 0.75 -0.8 1,350,464 + CA264_05795 0.78 -2.1 1,350,464 + CA264_05795 0.78 -0.6 1,350,487 - CA264_05795 0.83 -1.7 1,350,537 - +0.7 1,350,537 - -2.4 1,350,560 - +0.3 1,350,560 - -0.1 1,350,560 - -0.4 1,350,568 - -1.4 1,350,570 - +0.1 1,350,570 - -0.0 1,350,570 - +0.9 1,350,579 + -0.4 1,350,579 + +0.1 1,350,580 - -0.1 1,350,590 + -1.0 1,350,605 + +0.6 1,350,641 - +0.1 1,350,644 + +0.9 1,350,645 - -1.1 1,350,820 + -0.2 1,350,820 + +0.3 1,350,820 + -0.3 1,350,821 - -0.6 1,350,824 - -0.1 1,350,824 - -0.5 1,350,824 - +0.2 1,350,825 + +0.9 1,350,825 + -1.9 1,350,840 - -1.4 1,350,996 + CA264_05800 0.30 +0.3 1,350,997 - CA264_05800 0.30 -1.0 1,350,997 - CA264_05800 0.30 -0.3 1,351,043 - CA264_05800 0.38 +0.1 1,351,092 - CA264_05800 0.47 -0.8 1,351,112 + CA264_05800 0.51 +1.9 1,351,137 - CA264_05800 0.55 +0.6 1,351,193 + CA264_05800 0.66 -0.4 1,351,193 + CA264_05800 0.66 +2.2 1,351,194 - CA264_05800 0.66 -2.0 1,351,208 + CA264_05800 0.68 -0.4 1,351,209 - CA264_05800 0.68 -1.5 1,351,287 - CA264_05800 0.83 -0.6 1,351,359 - -0.4 1,351,398 - -0.5 1,351,470 + +0.2 1,351,474 + -0.9 1,351,475 - +3.5 1,351,519 + -0.9 1,351,524 + +0.2 1,351,533 + -1.1 1,351,533 + -0.1 1,351,534 - -0.1 1,351,542 - -0.1 1,351,559 - +0.5 1,351,588 + -0.8 1,351,635 + CA264_05805 0.12 +0.6 1,351,735 - CA264_05805 0.17 -0.7 1,351,735 - CA264_05805 0.17 -1.1 1,351,847 - CA264_05805 0.24 +0.7 1,351,963 + CA264_05805 0.30 +0.6 1,351,984 - CA264_05805 0.31 -0.1 1,352,001 + CA264_05805 0.32 -0.0 1,352,001 + CA264_05805 0.32 -1.3 1,352,054 - CA264_05805 0.35 -0.2 1,352,118 + CA264_05805 0.39 -0.9 1,352,118 + CA264_05805 0.39 +0.6 1,352,118 + CA264_05805 0.39 -1.1 1,352,119 - CA264_05805 0.39 -1.1 1,352,119 - CA264_05805 0.39 +0.7 1,352,124 + CA264_05805 0.39 -0.1 1,352,125 - CA264_05805 0.39 -0.7 1,352,131 + CA264_05805 0.40 -0.3
Or see this region's nucleotide sequence