Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04450 and CA264_04455 are separated by 343 nucleotides CA264_04455 and CA264_04460 are separated by 97 nucleotides CA264_04460 and CA264_04465 are separated by 89 nucleotides
CA264_04450: CA264_04450 - hypothetical protein, at 1,029,283 to 1,030,113
_04450
CA264_04455: CA264_04455 - hypothetical protein, at 1,030,457 to 1,031,698
_04455
CA264_04460: CA264_04460 - ABC transporter, at 1,031,796 to 1,032,272
_04460
CA264_04465: CA264_04465 - alpha/beta hydrolase, at 1,032,362 to 1,033,198
_04465
Position (kb)
1030
1031
1032 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1029.491 kb on + strand, within CA264_04450 at 1029.532 kb on + strand, within CA264_04450 at 1029.532 kb on + strand, within CA264_04450 at 1029.532 kb on + strand, within CA264_04450 at 1029.532 kb on + strand, within CA264_04450 at 1029.532 kb on + strand, within CA264_04450 at 1029.532 kb on + strand, within CA264_04450 at 1029.533 kb on - strand, within CA264_04450 at 1029.533 kb on - strand, within CA264_04450 at 1029.538 kb on + strand, within CA264_04450 at 1029.638 kb on + strand, within CA264_04450 at 1029.638 kb on + strand, within CA264_04450 at 1029.639 kb on - strand, within CA264_04450 at 1029.691 kb on + strand, within CA264_04450 at 1029.707 kb on - strand, within CA264_04450 at 1029.707 kb on - strand, within CA264_04450 at 1029.707 kb on - strand, within CA264_04450 at 1029.769 kb on - strand, within CA264_04450 at 1029.771 kb on + strand, within CA264_04450 at 1029.772 kb on - strand, within CA264_04450 at 1029.783 kb on + strand, within CA264_04450 at 1029.783 kb on + strand, within CA264_04450 at 1029.787 kb on + strand, within CA264_04450 at 1029.788 kb on - strand, within CA264_04450 at 1029.795 kb on + strand, within CA264_04450 at 1029.796 kb on - strand, within CA264_04450 at 1029.873 kb on + strand, within CA264_04450 at 1029.874 kb on - strand, within CA264_04450 at 1029.874 kb on - strand, within CA264_04450 at 1029.874 kb on - strand, within CA264_04450 at 1029.878 kb on - strand, within CA264_04450 at 1029.890 kb on - strand, within CA264_04450 at 1029.890 kb on - strand, within CA264_04450 at 1029.893 kb on + strand, within CA264_04450 at 1029.893 kb on + strand, within CA264_04450 at 1029.893 kb on + strand, within CA264_04450 at 1029.894 kb on - strand, within CA264_04450 at 1029.894 kb on - strand, within CA264_04450 at 1029.947 kb on - strand, within CA264_04450 at 1029.970 kb on + strand, within CA264_04450 at 1030.006 kb on + strand, within CA264_04450 at 1030.006 kb on + strand, within CA264_04450 at 1030.056 kb on - strand at 1030.064 kb on - strand at 1030.074 kb on + strand at 1030.095 kb on + strand at 1030.096 kb on - strand at 1030.099 kb on + strand at 1030.112 kb on - strand at 1030.141 kb on + strand at 1030.142 kb on - strand at 1030.142 kb on - strand at 1030.225 kb on + strand at 1030.226 kb on - strand at 1030.226 kb on - strand at 1030.247 kb on - strand at 1030.303 kb on - strand at 1030.303 kb on - strand at 1030.435 kb on + strand at 1030.453 kb on + strand at 1030.453 kb on + strand at 1030.453 kb on + strand at 1030.489 kb on + strand at 1030.504 kb on + strand at 1030.637 kb on + strand, within CA264_04455 at 1030.637 kb on + strand, within CA264_04455 at 1030.638 kb on - strand, within CA264_04455 at 1030.638 kb on - strand, within CA264_04455 at 1030.648 kb on + strand, within CA264_04455 at 1030.671 kb on - strand, within CA264_04455 at 1030.705 kb on + strand, within CA264_04455 at 1030.792 kb on - strand, within CA264_04455 at 1030.802 kb on + strand, within CA264_04455 at 1030.802 kb on + strand, within CA264_04455 at 1030.802 kb on + strand, within CA264_04455 at 1030.802 kb on + strand, within CA264_04455 at 1030.802 kb on + strand, within CA264_04455 at 1030.803 kb on - strand, within CA264_04455 at 1030.803 kb on - strand, within CA264_04455 at 1030.803 kb on - strand, within CA264_04455 at 1030.809 kb on - strand, within CA264_04455 at 1030.879 kb on + strand, within CA264_04455 at 1030.974 kb on - strand, within CA264_04455 at 1030.979 kb on - strand, within CA264_04455 at 1030.979 kb on - strand, within CA264_04455 at 1030.993 kb on - strand, within CA264_04455 at 1031.009 kb on + strand, within CA264_04455 at 1031.040 kb on + strand, within CA264_04455 at 1031.040 kb on + strand, within CA264_04455 at 1031.041 kb on - strand, within CA264_04455 at 1031.131 kb on + strand, within CA264_04455 at 1031.215 kb on - strand, within CA264_04455 at 1031.221 kb on + strand, within CA264_04455 at 1031.222 kb on - strand, within CA264_04455 at 1031.310 kb on - strand, within CA264_04455 at 1031.312 kb on + strand, within CA264_04455 at 1031.312 kb on + strand at 1031.340 kb on - strand, within CA264_04455 at 1031.379 kb on - strand, within CA264_04455 at 1031.402 kb on - strand, within CA264_04455 at 1031.540 kb on - strand, within CA264_04455 at 1031.616 kb on - strand at 1031.798 kb on - strand at 1031.798 kb on - strand at 1031.829 kb on + strand at 1032.062 kb on + strand, within CA264_04460 at 1032.063 kb on - strand, within CA264_04460 at 1032.065 kb on - strand, within CA264_04460 at 1032.231 kb on - strand at 1032.237 kb on + strand at 1032.252 kb on + strand at 1032.253 kb on - strand at 1032.279 kb on + strand at 1032.284 kb on + strand at 1032.289 kb on - strand at 1032.359 kb on + strand at 1032.360 kb on - strand at 1032.363 kb on + strand at 1032.363 kb on + strand at 1032.364 kb on - strand at 1032.364 kb on - strand at 1032.406 kb on + strand at 1032.406 kb on + strand at 1032.407 kb on - strand at 1032.450 kb on + strand, within CA264_04465 at 1032.527 kb on + strand, within CA264_04465 at 1032.527 kb on + strand, within CA264_04465 at 1032.527 kb on + strand, within CA264_04465 at 1032.527 kb on + strand, within CA264_04465 at 1032.527 kb on + strand, within CA264_04465 at 1032.527 kb on + strand, within CA264_04465 at 1032.528 kb on - strand, within CA264_04465 at 1032.528 kb on - strand, within CA264_04465 at 1032.528 kb on - strand, within CA264_04465 at 1032.530 kb on - strand, within CA264_04465 at 1032.549 kb on - strand, within CA264_04465 at 1032.646 kb on - strand, within CA264_04465 at 1032.666 kb on - strand, within CA264_04465 at 1032.688 kb on - strand, within CA264_04465 at 1032.694 kb on - strand, within CA264_04465
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,029,491 + CA264_04450 0.25 +0.7 1,029,532 + CA264_04450 0.30 -0.3 1,029,532 + CA264_04450 0.30 -0.2 1,029,532 + CA264_04450 0.30 -0.1 1,029,532 + CA264_04450 0.30 +0.8 1,029,532 + CA264_04450 0.30 +0.9 1,029,532 + CA264_04450 0.30 +1.2 1,029,533 - CA264_04450 0.30 +0.2 1,029,533 - CA264_04450 0.30 -1.0 1,029,538 + CA264_04450 0.31 +0.1 1,029,638 + CA264_04450 0.43 -0.5 1,029,638 + CA264_04450 0.43 +0.2 1,029,639 - CA264_04450 0.43 +0.4 1,029,691 + CA264_04450 0.49 -0.4 1,029,707 - CA264_04450 0.51 -1.0 1,029,707 - CA264_04450 0.51 +0.2 1,029,707 - CA264_04450 0.51 +1.0 1,029,769 - CA264_04450 0.58 +0.6 1,029,771 + CA264_04450 0.59 +0.2 1,029,772 - CA264_04450 0.59 -0.7 1,029,783 + CA264_04450 0.60 +1.4 1,029,783 + CA264_04450 0.60 -0.5 1,029,787 + CA264_04450 0.61 -0.1 1,029,788 - CA264_04450 0.61 -0.8 1,029,795 + CA264_04450 0.62 +2.0 1,029,796 - CA264_04450 0.62 -0.4 1,029,873 + CA264_04450 0.71 -0.8 1,029,874 - CA264_04450 0.71 +1.2 1,029,874 - CA264_04450 0.71 -0.4 1,029,874 - CA264_04450 0.71 -1.3 1,029,878 - CA264_04450 0.72 +1.7 1,029,890 - CA264_04450 0.73 -0.2 1,029,890 - CA264_04450 0.73 +0.6 1,029,893 + CA264_04450 0.73 -0.2 1,029,893 + CA264_04450 0.73 +1.4 1,029,893 + CA264_04450 0.73 -1.3 1,029,894 - CA264_04450 0.74 -0.6 1,029,894 - CA264_04450 0.74 -0.8 1,029,947 - CA264_04450 0.80 -0.1 1,029,970 + CA264_04450 0.83 -0.9 1,030,006 + CA264_04450 0.87 +0.4 1,030,006 + CA264_04450 0.87 -1.1 1,030,056 - +0.3 1,030,064 - -0.1 1,030,074 + -0.3 1,030,095 + -0.0 1,030,096 - -1.0 1,030,099 + -1.6 1,030,112 - -0.0 1,030,141 + -1.5 1,030,142 - -1.3 1,030,142 - +1.2 1,030,225 + -0.4 1,030,226 - +1.2 1,030,226 - -1.6 1,030,247 - -0.2 1,030,303 - +0.5 1,030,303 - +0.4 1,030,435 + -0.0 1,030,453 + +0.2 1,030,453 + -1.2 1,030,453 + -0.0 1,030,489 + +0.1 1,030,504 + -1.3 1,030,637 + CA264_04455 0.14 +1.4 1,030,637 + CA264_04455 0.14 -0.1 1,030,638 - CA264_04455 0.15 +1.0 1,030,638 - CA264_04455 0.15 +0.2 1,030,648 + CA264_04455 0.15 -0.8 1,030,671 - CA264_04455 0.17 +1.0 1,030,705 + CA264_04455 0.20 +0.2 1,030,792 - CA264_04455 0.27 +0.1 1,030,802 + CA264_04455 0.28 -0.5 1,030,802 + CA264_04455 0.28 -1.1 1,030,802 + CA264_04455 0.28 +0.2 1,030,802 + CA264_04455 0.28 +0.5 1,030,802 + CA264_04455 0.28 +0.2 1,030,803 - CA264_04455 0.28 -0.8 1,030,803 - CA264_04455 0.28 +1.7 1,030,803 - CA264_04455 0.28 -1.0 1,030,809 - CA264_04455 0.28 +2.0 1,030,879 + CA264_04455 0.34 +3.2 1,030,974 - CA264_04455 0.42 -0.7 1,030,979 - CA264_04455 0.42 -0.2 1,030,979 - CA264_04455 0.42 +0.3 1,030,993 - CA264_04455 0.43 +1.5 1,031,009 + CA264_04455 0.44 -0.4 1,031,040 + CA264_04455 0.47 -0.6 1,031,040 + CA264_04455 0.47 -0.0 1,031,041 - CA264_04455 0.47 +0.6 1,031,131 + CA264_04455 0.54 -0.4 1,031,215 - CA264_04455 0.61 -0.1 1,031,221 + CA264_04455 0.62 -1.0 1,031,222 - CA264_04455 0.62 +0.2 1,031,310 - CA264_04455 0.69 +0.1 1,031,312 + CA264_04455 0.69 +1.0 1,031,312 + +1.6 1,031,340 - CA264_04455 0.71 -0.0 1,031,379 - CA264_04455 0.74 +0.8 1,031,402 - CA264_04455 0.76 +0.3 1,031,540 - CA264_04455 0.87 -0.7 1,031,616 - +0.1 1,031,798 - -0.1 1,031,798 - -0.0 1,031,829 + -0.6 1,032,062 + CA264_04460 0.56 +0.1 1,032,063 - CA264_04460 0.56 +0.8 1,032,065 - CA264_04460 0.56 -1.6 1,032,231 - +1.4 1,032,237 + -0.1 1,032,252 + -1.3 1,032,253 - +0.1 1,032,279 + +0.8 1,032,284 + +0.5 1,032,289 - -1.0 1,032,359 + -0.4 1,032,360 - +0.1 1,032,363 + +1.2 1,032,363 + -0.0 1,032,364 - +0.5 1,032,364 - -0.8 1,032,406 + +0.3 1,032,406 + -0.2 1,032,407 - +1.0 1,032,450 + CA264_04465 0.11 +0.8 1,032,527 + CA264_04465 0.20 -0.7 1,032,527 + CA264_04465 0.20 -0.1 1,032,527 + CA264_04465 0.20 -0.9 1,032,527 + CA264_04465 0.20 -1.1 1,032,527 + CA264_04465 0.20 -0.4 1,032,527 + CA264_04465 0.20 +0.0 1,032,528 - CA264_04465 0.20 -0.9 1,032,528 - CA264_04465 0.20 -0.4 1,032,528 - CA264_04465 0.20 +2.8 1,032,530 - CA264_04465 0.20 -0.0 1,032,549 - CA264_04465 0.22 -1.1 1,032,646 - CA264_04465 0.34 -1.3 1,032,666 - CA264_04465 0.36 -0.5 1,032,688 - CA264_04465 0.39 -0.0 1,032,694 - CA264_04465 0.40 -0.6
Or see this region's nucleotide sequence