Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03645 and CA264_03650 are separated by 20 nucleotides CA264_03650 and CA264_03655 are separated by 25 nucleotides
CA264_03645: CA264_03645 - hypothetical protein, at 849,618 to 850,949
_03645
CA264_03650: CA264_03650 - MexE family multidrug efflux RND transporter periplasmic adaptor subunit, at 850,970 to 852,118
_03650
CA264_03655: CA264_03655 - multidrug efflux RND transporter permease subunit, at 852,144 to 855,338
_03655
Position (kb) 850
851
852
853 Strain fitness (log2 ratio) -2
-1
0
1
2 at 850.058 kb on - strand, within CA264_03645 at 850.146 kb on + strand, within CA264_03645 at 850.167 kb on + strand, within CA264_03645 at 850.167 kb on + strand, within CA264_03645 at 850.168 kb on - strand, within CA264_03645 at 850.168 kb on - strand, within CA264_03645 at 850.183 kb on + strand, within CA264_03645 at 850.278 kb on + strand, within CA264_03645 at 850.363 kb on + strand, within CA264_03645 at 850.363 kb on + strand, within CA264_03645 at 850.489 kb on - strand, within CA264_03645 at 850.498 kb on - strand, within CA264_03645 at 850.509 kb on + strand, within CA264_03645 at 850.509 kb on + strand, within CA264_03645 at 850.537 kb on - strand, within CA264_03645 at 850.609 kb on - strand at 850.660 kb on + strand, within CA264_03645 at 850.661 kb on - strand, within CA264_03645 at 850.715 kb on + strand, within CA264_03645 at 850.725 kb on + strand, within CA264_03645 at 850.725 kb on + strand, within CA264_03645 at 850.776 kb on + strand, within CA264_03645 at 850.777 kb on - strand, within CA264_03645 at 850.818 kb on + strand at 850.819 kb on - strand at 850.870 kb on - strand at 850.872 kb on + strand at 850.872 kb on + strand at 850.873 kb on - strand at 850.933 kb on + strand at 850.933 kb on + strand at 850.963 kb on - strand at 850.979 kb on - strand at 850.982 kb on + strand at 851.018 kb on - strand at 851.020 kb on - strand at 851.131 kb on + strand, within CA264_03650 at 851.131 kb on + strand, within CA264_03650 at 851.131 kb on + strand, within CA264_03650 at 851.207 kb on + strand, within CA264_03650 at 851.271 kb on - strand, within CA264_03650 at 851.397 kb on + strand, within CA264_03650 at 851.398 kb on - strand, within CA264_03650 at 851.398 kb on - strand, within CA264_03650 at 851.402 kb on + strand, within CA264_03650 at 851.402 kb on + strand, within CA264_03650 at 851.621 kb on - strand, within CA264_03650 at 851.647 kb on - strand, within CA264_03650 at 851.712 kb on - strand, within CA264_03650 at 851.773 kb on + strand, within CA264_03650 at 851.774 kb on - strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.922 kb on + strand, within CA264_03650 at 851.922 kb on + strand, within CA264_03650 at 852.025 kb on - strand at 852.035 kb on - strand at 852.157 kb on + strand at 852.161 kb on + strand at 852.163 kb on + strand at 852.182 kb on + strand at 852.184 kb on + strand at 852.194 kb on + strand at 852.195 kb on - strand at 852.195 kb on - strand at 852.196 kb on + strand at 852.196 kb on + strand at 852.196 kb on + strand at 852.196 kb on + strand at 852.225 kb on - strand at 852.257 kb on + strand at 852.291 kb on + strand at 852.292 kb on - strand at 852.292 kb on - strand at 852.294 kb on - strand at 852.375 kb on + strand at 852.375 kb on + strand at 852.376 kb on - strand at 852.376 kb on - strand at 852.380 kb on + strand at 852.380 kb on + strand at 852.386 kb on + strand at 852.387 kb on - strand at 852.511 kb on + strand, within CA264_03655 at 852.616 kb on - strand, within CA264_03655 at 852.616 kb on - strand, within CA264_03655 at 852.627 kb on + strand, within CA264_03655 at 852.627 kb on + strand, within CA264_03655 at 852.627 kb on + strand, within CA264_03655 at 852.628 kb on - strand, within CA264_03655 at 852.628 kb on - strand, within CA264_03655 at 852.628 kb on - strand, within CA264_03655 at 852.719 kb on + strand, within CA264_03655 at 852.733 kb on - strand, within CA264_03655 at 852.756 kb on - strand, within CA264_03655 at 852.756 kb on - strand, within CA264_03655 at 852.894 kb on - strand, within CA264_03655 at 852.930 kb on + strand, within CA264_03655 at 852.930 kb on + strand, within CA264_03655 at 852.972 kb on + strand, within CA264_03655 at 853.064 kb on + strand, within CA264_03655 at 853.068 kb on + strand, within CA264_03655 at 853.068 kb on + strand, within CA264_03655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 850,058 - CA264_03645 0.33 -0.1 850,146 + CA264_03645 0.40 -0.0 850,167 + CA264_03645 0.41 -0.5 850,167 + CA264_03645 0.41 -0.7 850,168 - CA264_03645 0.41 +2.0 850,168 - CA264_03645 0.41 -1.6 850,183 + CA264_03645 0.42 +0.6 850,278 + CA264_03645 0.50 -0.2 850,363 + CA264_03645 0.56 +2.0 850,363 + CA264_03645 0.56 -0.0 850,489 - CA264_03645 0.65 +0.2 850,498 - CA264_03645 0.66 -1.0 850,509 + CA264_03645 0.67 -1.0 850,509 + CA264_03645 0.67 -0.8 850,537 - CA264_03645 0.69 -0.6 850,609 - -0.0 850,660 + CA264_03645 0.78 -0.0 850,661 - CA264_03645 0.78 +1.0 850,715 + CA264_03645 0.82 -0.2 850,725 + CA264_03645 0.83 -0.7 850,725 + CA264_03645 0.83 -0.8 850,776 + CA264_03645 0.87 +0.4 850,777 - CA264_03645 0.87 -1.0 850,818 + +0.2 850,819 - +0.0 850,870 - +0.4 850,872 + -1.6 850,872 + +1.0 850,873 - -0.4 850,933 + -1.3 850,933 + +0.4 850,963 - -0.6 850,979 - +0.1 850,982 + +0.4 851,018 - -0.7 851,020 - -0.6 851,131 + CA264_03650 0.14 -2.5 851,131 + CA264_03650 0.14 -0.2 851,131 + CA264_03650 0.14 +0.4 851,207 + CA264_03650 0.21 +0.2 851,271 - CA264_03650 0.26 +0.0 851,397 + CA264_03650 0.37 +1.0 851,398 - CA264_03650 0.37 -0.5 851,398 - CA264_03650 0.37 -0.2 851,402 + CA264_03650 0.38 +0.1 851,402 + CA264_03650 0.38 +0.2 851,621 - CA264_03650 0.57 -1.3 851,647 - CA264_03650 0.59 -0.1 851,712 - CA264_03650 0.65 +0.5 851,773 + CA264_03650 0.70 +0.3 851,774 - CA264_03650 0.70 -0.4 851,912 + CA264_03650 0.82 -0.5 851,912 + CA264_03650 0.82 -1.3 851,912 + CA264_03650 0.82 -1.1 851,912 + CA264_03650 0.82 -0.7 851,912 + CA264_03650 0.82 -1.4 851,913 - CA264_03650 0.82 -0.0 851,913 - CA264_03650 0.82 -0.0 851,913 - CA264_03650 0.82 +0.3 851,913 - CA264_03650 0.82 +1.9 851,913 - CA264_03650 0.82 +2.0 851,918 + CA264_03650 0.83 +0.3 851,918 + CA264_03650 0.83 -1.8 851,918 + CA264_03650 0.83 -0.0 851,919 - CA264_03650 0.83 +0.4 851,919 - CA264_03650 0.83 -0.1 851,919 - CA264_03650 0.83 +1.0 851,919 - CA264_03650 0.83 -0.4 851,919 - CA264_03650 0.83 -0.0 851,922 + CA264_03650 0.83 -0.1 851,922 + CA264_03650 0.83 +1.0 852,025 - -0.6 852,035 - -0.0 852,157 + -0.3 852,161 + -1.2 852,163 + +1.6 852,182 + +1.0 852,184 + +0.0 852,194 + +0.4 852,195 - -0.3 852,195 - +1.0 852,196 + -0.3 852,196 + -0.2 852,196 + -0.5 852,196 + -1.1 852,225 - -0.3 852,257 + -0.5 852,291 + -0.6 852,292 - -0.6 852,292 - -0.6 852,294 - -0.4 852,375 + -0.2 852,375 + -0.4 852,376 - +1.5 852,376 - +0.1 852,380 + -0.1 852,380 + +0.3 852,386 + +0.1 852,387 - +1.5 852,511 + CA264_03655 0.11 -1.0 852,616 - CA264_03655 0.15 +0.7 852,616 - CA264_03655 0.15 -0.1 852,627 + CA264_03655 0.15 +0.3 852,627 + CA264_03655 0.15 -1.3 852,627 + CA264_03655 0.15 +0.4 852,628 - CA264_03655 0.15 -0.0 852,628 - CA264_03655 0.15 -0.4 852,628 - CA264_03655 0.15 -0.3 852,719 + CA264_03655 0.18 -0.0 852,733 - CA264_03655 0.18 +1.0 852,756 - CA264_03655 0.19 -0.3 852,756 - CA264_03655 0.19 -2.2 852,894 - CA264_03655 0.23 -2.2 852,930 + CA264_03655 0.25 -0.2 852,930 + CA264_03655 0.25 -0.1 852,972 + CA264_03655 0.26 -0.0 853,064 + CA264_03655 0.29 +1.0 853,068 + CA264_03655 0.29 +0.2 853,068 + CA264_03655 0.29 -0.5
Or see this region's nucleotide sequence