Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00700 and CA264_00705 are separated by 142 nucleotides CA264_00705 and CA264_00710 are separated by 69 nucleotides CA264_00710 and CA264_00715 are separated by 9 nucleotides
CA264_00700: CA264_00700 - hypothetical protein, at 152,562 to 153,335
_00700
CA264_00705: CA264_00705 - hypothetical protein, at 153,478 to 153,810
_00705
CA264_00710: CA264_00710 - hypothetical protein, at 153,880 to 154,635
_00710
CA264_00715: CA264_00715 - hypothetical protein, at 154,645 to 155,742
_00715
Position (kb)
153
154
155 Strain fitness (log2 ratio)
-2
-1
0
1 at 152.940 kb on + strand, within CA264_00700 at 152.940 kb on + strand, within CA264_00700 at 153.061 kb on + strand, within CA264_00700 at 153.083 kb on - strand, within CA264_00700 at 153.105 kb on - strand, within CA264_00700 at 153.105 kb on - strand, within CA264_00700 at 153.128 kb on - strand, within CA264_00700 at 153.173 kb on - strand, within CA264_00700 at 153.173 kb on - strand, within CA264_00700 at 153.205 kb on + strand, within CA264_00700 at 153.205 kb on + strand, within CA264_00700 at 153.205 kb on + strand, within CA264_00700 at 153.205 kb on + strand, within CA264_00700 at 153.206 kb on - strand, within CA264_00700 at 153.206 kb on - strand, within CA264_00700 at 153.217 kb on - strand, within CA264_00700 at 153.217 kb on - strand, within CA264_00700 at 153.217 kb on - strand, within CA264_00700 at 153.218 kb on + strand, within CA264_00700 at 153.300 kb on + strand at 153.300 kb on + strand at 153.300 kb on + strand at 153.301 kb on - strand at 153.303 kb on + strand at 153.304 kb on - strand at 153.304 kb on - strand at 153.312 kb on + strand at 153.312 kb on + strand at 153.313 kb on - strand at 153.313 kb on - strand at 153.363 kb on + strand at 153.363 kb on + strand at 153.364 kb on - strand at 153.378 kb on - strand at 153.379 kb on + strand at 153.386 kb on + strand at 153.387 kb on - strand at 153.390 kb on + strand at 153.390 kb on + strand at 153.390 kb on + strand at 153.390 kb on + strand at 153.391 kb on - strand at 153.393 kb on - strand at 153.422 kb on - strand at 153.423 kb on + strand at 153.424 kb on - strand at 153.424 kb on - strand at 153.468 kb on + strand at 153.469 kb on - strand at 153.469 kb on - strand at 153.479 kb on + strand at 153.479 kb on + strand at 153.479 kb on + strand at 153.479 kb on + strand at 153.479 kb on + strand at 153.480 kb on - strand at 153.480 kb on - strand at 153.480 kb on - strand at 153.482 kb on - strand at 153.512 kb on + strand, within CA264_00705 at 153.513 kb on - strand, within CA264_00705 at 153.614 kb on + strand, within CA264_00705 at 153.614 kb on + strand, within CA264_00705 at 153.615 kb on - strand, within CA264_00705 at 153.752 kb on + strand, within CA264_00705 at 153.753 kb on - strand, within CA264_00705 at 153.753 kb on - strand, within CA264_00705 at 153.792 kb on + strand at 153.792 kb on + strand at 153.793 kb on - strand at 153.817 kb on + strand at 153.871 kb on + strand at 153.887 kb on - strand at 154.092 kb on - strand, within CA264_00710 at 154.149 kb on - strand, within CA264_00710 at 154.149 kb on - strand, within CA264_00710 at 154.174 kb on - strand, within CA264_00710 at 154.286 kb on + strand, within CA264_00710 at 154.314 kb on + strand, within CA264_00710 at 154.315 kb on - strand, within CA264_00710 at 154.370 kb on + strand, within CA264_00710 at 154.415 kb on + strand, within CA264_00710 at 154.416 kb on - strand, within CA264_00710 at 154.416 kb on - strand, within CA264_00710 at 154.423 kb on - strand, within CA264_00710 at 154.642 kb on + strand at 154.643 kb on - strand at 154.756 kb on - strand, within CA264_00715 at 154.780 kb on + strand, within CA264_00715 at 154.782 kb on + strand, within CA264_00715 at 154.810 kb on - strand, within CA264_00715 at 154.811 kb on + strand, within CA264_00715 at 154.811 kb on + strand, within CA264_00715 at 154.812 kb on - strand, within CA264_00715 at 154.830 kb on - strand, within CA264_00715 at 154.830 kb on - strand, within CA264_00715 at 154.877 kb on + strand, within CA264_00715 at 154.877 kb on + strand, within CA264_00715 at 154.877 kb on + strand, within CA264_00715 at 154.877 kb on + strand, within CA264_00715 at 154.877 kb on + strand, within CA264_00715 at 154.878 kb on - strand, within CA264_00715 at 154.878 kb on - strand, within CA264_00715 at 154.878 kb on - strand, within CA264_00715 at 154.977 kb on + strand, within CA264_00715 at 155.097 kb on + strand, within CA264_00715 at 155.142 kb on - strand, within CA264_00715 at 155.150 kb on + strand, within CA264_00715 at 155.169 kb on + strand, within CA264_00715 at 155.170 kb on - strand, within CA264_00715 at 155.204 kb on - strand, within CA264_00715 at 155.308 kb on + strand, within CA264_00715 at 155.319 kb on + strand, within CA264_00715 at 155.320 kb on - strand, within CA264_00715 at 155.320 kb on - strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 152,940 + CA264_00700 0.49 -0.3 152,940 + CA264_00700 0.49 -0.4 153,061 + CA264_00700 0.64 -0.0 153,083 - CA264_00700 0.67 -0.3 153,105 - CA264_00700 0.70 -0.7 153,105 - CA264_00700 0.70 +0.1 153,128 - CA264_00700 0.73 +0.3 153,173 - CA264_00700 0.79 +0.3 153,173 - CA264_00700 0.79 -0.7 153,205 + CA264_00700 0.83 +0.7 153,205 + CA264_00700 0.83 +0.3 153,205 + CA264_00700 0.83 -1.3 153,205 + CA264_00700 0.83 -1.8 153,206 - CA264_00700 0.83 -1.5 153,206 - CA264_00700 0.83 -0.3 153,217 - CA264_00700 0.85 -0.7 153,217 - CA264_00700 0.85 -1.0 153,217 - CA264_00700 0.85 -0.7 153,218 + CA264_00700 0.85 +0.7 153,300 + +0.2 153,300 + -0.5 153,300 + +0.6 153,301 - +0.1 153,303 + -0.1 153,304 - -0.5 153,304 - +0.7 153,312 + -0.3 153,312 + +0.5 153,313 - -0.1 153,313 - +0.1 153,363 + +1.5 153,363 + -0.7 153,364 - -0.6 153,378 - +0.1 153,379 + -0.3 153,386 + +0.7 153,387 - +0.6 153,390 + +1.5 153,390 + +0.0 153,390 + +0.2 153,390 + -1.3 153,391 - -0.2 153,393 - -0.7 153,422 - -0.7 153,423 + -0.3 153,424 - -1.0 153,424 - -0.2 153,468 + -0.2 153,469 - +0.7 153,469 - -0.3 153,479 + -0.2 153,479 + +1.1 153,479 + -0.3 153,479 + +0.4 153,479 + -0.4 153,480 - -1.2 153,480 - -0.9 153,480 - -0.9 153,482 - +1.1 153,512 + CA264_00705 0.10 -0.3 153,513 - CA264_00705 0.11 +0.1 153,614 + CA264_00705 0.41 -0.5 153,614 + CA264_00705 0.41 +0.2 153,615 - CA264_00705 0.41 -1.0 153,752 + CA264_00705 0.82 -0.7 153,753 - CA264_00705 0.83 +1.1 153,753 - CA264_00705 0.83 -0.1 153,792 + -0.3 153,792 + -1.3 153,793 - -0.2 153,817 + -0.9 153,871 + -0.4 153,887 - -0.5 154,092 - CA264_00710 0.28 +0.5 154,149 - CA264_00710 0.36 -0.2 154,149 - CA264_00710 0.36 -0.3 154,174 - CA264_00710 0.39 +0.3 154,286 + CA264_00710 0.54 -0.7 154,314 + CA264_00710 0.57 +0.5 154,315 - CA264_00710 0.58 -0.4 154,370 + CA264_00710 0.65 +0.7 154,415 + CA264_00710 0.71 -1.3 154,416 - CA264_00710 0.71 -0.3 154,416 - CA264_00710 0.71 +1.1 154,423 - CA264_00710 0.72 +0.3 154,642 + +0.0 154,643 - -0.3 154,756 - CA264_00715 0.10 -0.3 154,780 + CA264_00715 0.12 -0.0 154,782 + CA264_00715 0.12 -0.3 154,810 - CA264_00715 0.15 -0.0 154,811 + CA264_00715 0.15 -1.5 154,811 + CA264_00715 0.15 -0.8 154,812 - CA264_00715 0.15 +0.5 154,830 - CA264_00715 0.17 +1.1 154,830 - CA264_00715 0.17 -0.3 154,877 + CA264_00715 0.21 -0.3 154,877 + CA264_00715 0.21 -0.0 154,877 + CA264_00715 0.21 +0.1 154,877 + CA264_00715 0.21 +0.0 154,877 + CA264_00715 0.21 +0.2 154,878 - CA264_00715 0.21 -0.2 154,878 - CA264_00715 0.21 -0.3 154,878 - CA264_00715 0.21 -0.2 154,977 + CA264_00715 0.30 +1.2 155,097 + CA264_00715 0.41 -1.3 155,142 - CA264_00715 0.45 +0.0 155,150 + CA264_00715 0.46 +1.6 155,169 + CA264_00715 0.48 -1.8 155,170 - CA264_00715 0.48 -0.3 155,204 - CA264_00715 0.51 -0.5 155,308 + CA264_00715 0.60 -0.4 155,319 + CA264_00715 0.61 +0.4 155,320 - CA264_00715 0.61 +0.1 155,320 - CA264_00715 0.61 -0.3 155,598 + CA264_00715 0.87 +0.3 155,598 + CA264_00715 0.87 -0.1 155,598 + CA264_00715 0.87 -0.4
Or see this region's nucleotide sequence