Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00560 and CA264_00565 are separated by 59 nucleotides CA264_00565 and CA264_00570 are separated by 219 nucleotides CA264_00570 and CA264_00575 are separated by 122 nucleotides
CA264_00560: CA264_00560 - hypothetical protein, at 124,527 to 124,868
_00560
CA264_00565: CA264_00565 - hypothetical protein, at 124,928 to 125,161
_00565
CA264_00570: CA264_00570 - methionine--tRNA ligase, at 125,381 to 127,420
_00570
CA264_00575: CA264_00575 - MFS transporter, at 127,543 to 128,811
_00575
Position (kb)
125
126
127
128 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 124.407 kb on - strand at 124.463 kb on - strand at 124.463 kb on - strand at 124.468 kb on + strand at 124.469 kb on - strand at 124.469 kb on - strand at 124.469 kb on - strand at 124.473 kb on + strand at 124.475 kb on + strand at 124.479 kb on + strand at 124.479 kb on + strand at 124.504 kb on + strand at 124.504 kb on + strand at 124.505 kb on - strand at 124.505 kb on - strand at 124.537 kb on - strand at 124.537 kb on - strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.544 kb on - strand at 124.544 kb on - strand at 124.544 kb on - strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.548 kb on - strand at 124.565 kb on - strand, within CA264_00560 at 124.650 kb on + strand, within CA264_00560 at 124.821 kb on + strand, within CA264_00560 at 124.821 kb on + strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.833 kb on + strand, within CA264_00560 at 124.834 kb on - strand at 124.894 kb on - strand at 125.012 kb on + strand, within CA264_00565 at 125.016 kb on + strand, within CA264_00565 at 125.146 kb on + strand at 125.147 kb on - strand at 125.161 kb on + strand at 125.161 kb on + strand at 125.162 kb on - strand at 125.162 kb on - strand at 125.226 kb on - strand at 125.226 kb on - strand at 125.292 kb on + strand at 125.293 kb on - strand at 125.301 kb on - strand at 125.302 kb on + strand at 125.303 kb on - strand at 125.303 kb on - strand at 125.351 kb on - strand at 125.351 kb on - strand at 125.359 kb on - strand at 127.102 kb on + strand, within CA264_00570 at 127.102 kb on + strand, within CA264_00570 at 127.102 kb on + strand, within CA264_00570 at 127.443 kb on + strand at 127.496 kb on + strand at 127.497 kb on - strand at 127.517 kb on - strand at 127.518 kb on + strand at 127.519 kb on - strand at 127.519 kb on - strand at 127.519 kb on - strand at 127.522 kb on + strand at 127.522 kb on + strand at 127.523 kb on - strand at 127.523 kb on - strand at 127.523 kb on - strand at 127.527 kb on + strand at 127.610 kb on - strand at 127.628 kb on + strand at 127.628 kb on + strand at 127.758 kb on - strand, within CA264_00575 at 127.769 kb on + strand, within CA264_00575 at 127.769 kb on + strand, within CA264_00575 at 127.770 kb on - strand, within CA264_00575 at 127.770 kb on - strand, within CA264_00575 at 127.807 kb on - strand, within CA264_00575 at 127.845 kb on + strand, within CA264_00575 at 127.846 kb on - strand, within CA264_00575 at 127.846 kb on - strand, within CA264_00575 at 127.875 kb on + strand, within CA264_00575 at 127.879 kb on + strand, within CA264_00575 at 127.924 kb on + strand, within CA264_00575 at 127.942 kb on - strand, within CA264_00575 at 127.977 kb on - strand, within CA264_00575 at 128.055 kb on + strand, within CA264_00575 at 128.055 kb on + strand, within CA264_00575 at 128.056 kb on - strand, within CA264_00575 at 128.056 kb on - strand, within CA264_00575 at 128.056 kb on - strand, within CA264_00575 at 128.057 kb on + strand, within CA264_00575 at 128.057 kb on + strand, within CA264_00575 at 128.057 kb on + strand, within CA264_00575 at 128.058 kb on - strand, within CA264_00575 at 128.058 kb on - strand, within CA264_00575 at 128.072 kb on + strand, within CA264_00575 at 128.140 kb on + strand, within CA264_00575 at 128.307 kb on - strand, within CA264_00575 at 128.311 kb on + strand, within CA264_00575 at 128.415 kb on - strand, within CA264_00575
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 124,407 - -0.8 124,463 - -0.3 124,463 - +0.2 124,468 + +0.1 124,469 - -0.5 124,469 - -0.6 124,469 - +0.1 124,473 + -0.2 124,475 + +0.2 124,479 + +0.6 124,479 + -0.3 124,504 + -2.1 124,504 + +1.1 124,505 - -2.3 124,505 - -0.5 124,537 - -0.6 124,537 - +0.5 124,543 + +0.5 124,543 + -0.3 124,543 + -0.8 124,543 + +1.8 124,543 + +0.1 124,543 + -0.5 124,543 + +0.3 124,544 - -0.7 124,544 - +1.1 124,544 - +0.2 124,545 + -1.6 124,545 + -0.2 124,545 + -2.3 124,545 + -0.6 124,545 + +0.3 124,546 - +0.2 124,546 - -0.1 124,546 - -2.3 124,546 - -0.4 124,546 - -0.6 124,546 - -0.2 124,546 - -0.6 124,548 - +0.1 124,565 - CA264_00560 0.11 +0.1 124,650 + CA264_00560 0.36 -0.6 124,821 + CA264_00560 0.86 +0.7 124,821 + CA264_00560 0.86 +2.1 124,822 - CA264_00560 0.86 +0.3 124,822 - CA264_00560 0.86 -0.4 124,822 - CA264_00560 0.86 -0.4 124,833 + CA264_00560 0.89 +0.5 124,834 - -0.1 124,894 - -0.8 125,012 + CA264_00565 0.36 +2.1 125,016 + CA264_00565 0.38 +1.1 125,146 + -0.7 125,147 - +0.1 125,161 + -1.5 125,161 + +0.2 125,162 - -0.2 125,162 - -0.3 125,226 - +0.1 125,226 - -1.0 125,292 + +0.3 125,293 - -0.2 125,301 - +1.1 125,302 + -1.0 125,303 - -1.6 125,303 - -0.5 125,351 - -0.2 125,351 - -0.7 125,359 - +2.4 127,102 + CA264_00570 0.84 +0.1 127,102 + CA264_00570 0.84 -1.2 127,102 + CA264_00570 0.84 -0.0 127,443 + -0.9 127,496 + +0.1 127,497 - +0.1 127,517 - +0.3 127,518 + -0.2 127,519 - -1.5 127,519 - -0.2 127,519 - -0.5 127,522 + -2.1 127,522 + -0.2 127,523 - -0.5 127,523 - +0.8 127,523 - -0.1 127,527 + +0.0 127,610 - -1.4 127,628 + -0.5 127,628 + -1.7 127,758 - CA264_00575 0.17 -0.6 127,769 + CA264_00575 0.18 +1.1 127,769 + CA264_00575 0.18 -0.5 127,770 - CA264_00575 0.18 +0.3 127,770 - CA264_00575 0.18 +0.9 127,807 - CA264_00575 0.21 +1.1 127,845 + CA264_00575 0.24 -1.0 127,846 - CA264_00575 0.24 +0.8 127,846 - CA264_00575 0.24 -1.1 127,875 + CA264_00575 0.26 -0.2 127,879 + CA264_00575 0.26 +0.1 127,924 + CA264_00575 0.30 -0.3 127,942 - CA264_00575 0.31 -0.4 127,977 - CA264_00575 0.34 +0.7 128,055 + CA264_00575 0.40 -3.0 128,055 + CA264_00575 0.40 -0.7 128,056 - CA264_00575 0.40 -0.4 128,056 - CA264_00575 0.40 -0.6 128,056 - CA264_00575 0.40 +0.4 128,057 + CA264_00575 0.41 -0.3 128,057 + CA264_00575 0.41 +0.8 128,057 + CA264_00575 0.41 -1.1 128,058 - CA264_00575 0.41 +0.3 128,058 - CA264_00575 0.41 -1.1 128,072 + CA264_00575 0.42 -0.2 128,140 + CA264_00575 0.47 +1.1 128,307 - CA264_00575 0.60 -0.2 128,311 + CA264_00575 0.61 -1.3 128,415 - CA264_00575 0.69 -1.3
Or see this region's nucleotide sequence