Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS11195 and ABID97_RS11200 overlap by 20 nucleotides ABID97_RS11200 and ABID97_RS11205 overlap by 4 nucleotides ABID97_RS11205 and ABID97_RS11210 are separated by 9 nucleotides
ABID97_RS11195: ABID97_RS11195 - ABC transporter ATP-binding protein, at 2,315,297 to 2,316,013
_RS11195
ABID97_RS11200: ABID97_RS11200 - ABC transporter ATP-binding protein, at 2,315,994 to 2,316,740
_RS11200
ABID97_RS11205: ABID97_RS11205 - branched-chain amino acid ABC transporter permease, at 2,316,737 to 2,317,771
_RS11205
ABID97_RS11210: ABID97_RS11210 - branched-chain amino acid ABC transporter permease, at 2,317,781 to 2,318,668
_RS11210
Position (kb)
2316
2317
2318 Strain fitness (log2 ratio)
-1
0
1 at 2315.870 kb on + strand, within ABID97_RS11195 at 2315.871 kb on - strand, within ABID97_RS11195 at 2316.014 kb on - strand at 2316.014 kb on - strand at 2316.028 kb on + strand at 2316.028 kb on + strand at 2316.028 kb on + strand at 2316.029 kb on - strand at 2316.846 kb on + strand, within ABID97_RS11205 at 2317.057 kb on - strand, within ABID97_RS11205 at 2317.267 kb on - strand, within ABID97_RS11205 at 2317.270 kb on - strand, within ABID97_RS11205 at 2317.273 kb on - strand, within ABID97_RS11205 at 2317.540 kb on - strand, within ABID97_RS11205 at 2317.641 kb on + strand, within ABID97_RS11205 at 2317.641 kb on + strand, within ABID97_RS11205 at 2318.337 kb on + strand, within ABID97_RS11210 at 2318.338 kb on - strand, within ABID97_RS11210 at 2318.434 kb on - strand, within ABID97_RS11210 at 2318.478 kb on + strand, within ABID97_RS11210 at 2318.478 kb on + strand, within ABID97_RS11210 at 2318.479 kb on - strand, within ABID97_RS11210 at 2318.479 kb on - strand, within ABID97_RS11210 at 2318.520 kb on + strand, within ABID97_RS11210 at 2318.521 kb on - strand, within ABID97_RS11210 at 2318.669 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 2,315,870 + ABID97_RS11195 0.80 +0.2 2,315,871 - ABID97_RS11195 0.80 -0.7 2,316,014 - -0.5 2,316,014 - -0.2 2,316,028 + +0.3 2,316,028 + +0.1 2,316,028 + -0.1 2,316,029 - +1.3 2,316,846 + ABID97_RS11205 0.11 +0.0 2,317,057 - ABID97_RS11205 0.31 +0.5 2,317,267 - ABID97_RS11205 0.51 -0.6 2,317,270 - ABID97_RS11205 0.51 -0.3 2,317,273 - ABID97_RS11205 0.52 -0.2 2,317,540 - ABID97_RS11205 0.78 -0.1 2,317,641 + ABID97_RS11205 0.87 +0.7 2,317,641 + ABID97_RS11205 0.87 +0.6 2,318,337 + ABID97_RS11210 0.63 -0.7 2,318,338 - ABID97_RS11210 0.63 +0.3 2,318,434 - ABID97_RS11210 0.74 +0.4 2,318,478 + ABID97_RS11210 0.78 -1.1 2,318,478 + ABID97_RS11210 0.78 -1.7 2,318,479 - ABID97_RS11210 0.79 -0.1 2,318,479 - ABID97_RS11210 0.79 -0.3 2,318,520 + ABID97_RS11210 0.83 +0.5 2,318,521 - ABID97_RS11210 0.83 -0.6 2,318,669 - -0.3
Or see this region's nucleotide sequence