Strain Fitness in Escherichia coli BW25113 around b3993

Experiment: D-Glucose (C) MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) MOPS
4,190,791	+	thiS	b4407	0.65	+0.2
4,190,820	+	thiS	b4407	0.80	+1.8
4,190,830	+	thiS	b4407	0.85	-0.7
4,190,860	-				-1.6
4,190,908	-				-1.2
4,190,968	-	thiF	b3992	0.16	-3.2
4,190,968	-	thiF	b3992	0.16	-1.5
4,191,030	+	thiF	b3992	0.25	-3.3
4,191,121	+	thiF	b3992	0.37	-2.0
4,191,121	+	thiF	b3992	0.37	-0.3
4,191,129	-	thiF	b3992	0.38	-3.2
4,191,234	+	thiF	b3992	0.52	-1.5
4,191,236	-	thiF	b3992	0.52	-2.0
4,191,248	+	thiF	b3992	0.53	-0.8
4,191,269	+	thiF	b3992	0.56	-1.6
4,191,282	-	thiF	b3992	0.58	-0.1
4,191,310	-	thiF	b3992	0.62	-0.4
4,191,368	-	thiF	b3992	0.69	-2.5
4,191,376	+	thiF	b3992	0.70	-2.9
4,191,468	-	thiF	b3992	0.83	-2.7
4,191,475	-	thiF	b3992	0.83	-4.2
4,191,475	-	thiF	b3992	0.83	-1.9
4,191,483	-	thiF	b3992	0.85	-1.4
4,191,483	-	thiF	b3992	0.85	-2.7
4,191,489	+	thiF	b3992	0.85	-1.1
4,191,489	+	thiF	b3992	0.85	-1.2
4,191,489	+	thiF	b3992	0.85	-1.8
4,191,489	+	thiF	b3992	0.85	-0.6
4,191,680	+	thiE	b3993	0.14	-0.2
4,191,690	+	thiE	b3993	0.15	-2.5
4,191,731	-	thiE	b3993	0.22	-1.4
4,191,755	+	thiE	b3993	0.26	-1.7
4,191,755	+	thiE	b3993	0.26	-1.5
4,191,859	-	thiE	b3993	0.42	+0.2
4,191,869	-	thiE	b3993	0.44	-0.8
4,191,938	+	thiE	b3993	0.54	-1.4
4,191,983	-	thiE	b3993	0.61	-3.8
4,191,995	-	thiE	b3993	0.63	-0.8
4,191,995	-	thiE	b3993	0.63	-0.4
4,192,021	-	thiE	b3993	0.67	-1.2
4,192,021	-	thiE	b3993	0.67	-1.3
4,192,054	-	thiE	b3993	0.73	-1.8
4,192,054	-	thiE	b3993	0.73	+0.2
4,192,122	-	thiE	b3993	0.83	-1.6
4,192,122	-	thiE	b3993	0.83	-1.2
4,192,151	+	thiE	b3993	0.88	-1.6
4,192,151	+	thiE	b3993	0.88	-2.2
4,192,156	+	thiE	b3993	0.89	-2.0
4,192,158	+	thiE	b3993	0.89	-1.6
4,192,165	+				-0.8
4,192,165	+				-1.2
4,192,167	-				-0.4
4,192,167	-				-2.5
4,192,175	+				+0.2
4,192,175	+				-0.4
4,192,176	-				-0.4
4,192,180	+				-2.8
4,192,183	-				-1.6
4,192,183	-				-1.3
4,192,183	-				-2.2
4,192,410	-				-1.0
4,192,474	+	thiC	b3994	0.13	-1.8
4,192,474	+	thiC	b3994	0.13	+0.2
4,192,547	+	thiC	b3994	0.17	-0.3
4,192,576	-	thiC	b3994	0.18	-0.4
4,192,576	-	thiC	b3994	0.18	-1.2
4,192,606	-	thiC	b3994	0.20	-2.8
4,192,636	+	thiC	b3994	0.22	-2.2
4,192,644	-	thiC	b3994	0.22	-0.6
4,192,644	-	thiC	b3994	0.22	-3.1
4,192,647	-	thiC	b3994	0.22	-1.2
4,192,647	-	thiC	b3994	0.22	-0.8
4,192,652	-	thiC	b3994	0.22	-1.6
4,192,652	-	thiC	b3994	0.22	-2.4
4,192,680	+	thiC	b3994	0.24	-2.0
4,192,687	-	thiC	b3994	0.24	-2.3
4,192,687	-	thiC	b3994	0.24	-2.3
4,192,741	-	thiC	b3994	0.27	-1.2
4,192,749	-	thiC	b3994	0.28	-1.6
4,192,749	-	thiC	b3994	0.28	-1.6
4,192,774	-	thiC	b3994	0.29	+0.2
4,192,774	-	thiC	b3994	0.29	-0.4
4,192,875	-	thiC	b3994	0.34	-2.1
4,192,877	+	thiC	b3994	0.34	-1.8
4,192,884	-	thiC	b3994	0.35	-1.6
4,192,886	-	thiC	b3994	0.35	-1.0
4,192,886	-	thiC	b3994	0.35	-2.3
4,192,940	-	thiC	b3994	0.38	-1.1
4,192,997	+	thiC	b3994	0.41	-0.4
4,192,997	+	thiC	b3994	0.41	-2.2
4,193,000	+	thiC	b3994	0.41	-1.0
4,193,005	-	thiC	b3994	0.41	-1.5
4,193,084	-	thiC	b3994	0.45	-1.6
4,193,106	+	thiC	b3994	0.46	-3.2
4,193,107	-	thiC	b3994	0.46	-1.2
4,193,107	-	thiC	b3994	0.46	-1.6
4,193,138	+	thiC	b3994	0.48	-1.8
4,193,166	-	thiC	b3994	0.50	-2.5
4,193,168	-	thiC	b3994	0.50	-0.8
4,193,168	-	thiC	b3994	0.50	-0.1