Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3105

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,709,399	-		Echvi_3104	0.46	-1.2
3,709,468	+		Echvi_3104	0.50	-0.9
3,709,469	-		Echvi_3104	0.50	-0.3
3,709,545	+		Echvi_3104	0.54	-0.0
3,709,629	+		Echvi_3104	0.59	-0.1
3,709,629	+		Echvi_3104	0.59	+0.1
3,709,735	+		Echvi_3104	0.66	+0.2
3,709,746	+		Echvi_3104	0.66	-0.4
3,709,746	+		Echvi_3104	0.66	+0.5
3,709,746	+		Echvi_3104	0.66	-0.7
3,709,746	+		Echvi_3104	0.66	-0.3
3,709,747	-		Echvi_3104	0.66	+0.0
3,709,747	-		Echvi_3104	0.66	+0.1
3,709,747	-		Echvi_3104	0.66	+0.7
3,709,803	-		Echvi_3104	0.70	-0.3
3,709,881	+		Echvi_3104	0.74	-0.8
3,709,893	-		Echvi_3104	0.75	+0.3
3,709,893	-		Echvi_3104	0.75	+0.2
3,709,942	+		Echvi_3104	0.78	-0.4
3,709,943	-		Echvi_3104	0.78	+0.6
3,709,943	-		Echvi_3104	0.78	+1.2
3,709,976	+		Echvi_3104	0.80	+0.8
3,709,976	+		Echvi_3104	0.80	+0.4
3,709,976	+		Echvi_3104	0.80	+0.6
3,709,976	+		Echvi_3104	0.80	+1.2
3,709,977	-		Echvi_3104	0.80	+0.5
3,709,977	-		Echvi_3104	0.80	-1.6
3,709,985	+		Echvi_3104	0.81	-0.1
3,709,986	-		Echvi_3104	0.81	-1.1
3,710,017	+		Echvi_3104	0.83	-2.4
3,710,017	+		Echvi_3104	0.83	-0.0
3,710,017	+		Echvi_3104	0.83	+0.6
3,710,017	+		Echvi_3104	0.83	+0.1
3,710,017	+		Echvi_3104	0.83	-0.1
3,710,018	-		Echvi_3104	0.83	-0.4
3,710,020	-		Echvi_3104	0.83	-1.0
3,710,061	+		Echvi_3104	0.85	-0.4
3,710,062	-		Echvi_3104	0.85	-1.0
3,710,109	+		Echvi_3104	0.88	-0.6
3,710,110	-		Echvi_3104	0.88	-0.6
3,710,110	-		Echvi_3104	0.88	+0.9
3,710,128	+		Echvi_3104	0.89	-0.6
3,710,128	+		Echvi_3104	0.89	-2.0
3,710,129	-		Echvi_3104	0.89	-0.2
3,710,130	+		Echvi_3104	0.89	-0.1
3,710,130	+		Echvi_3104	0.89	-0.1
3,710,130	+		Echvi_3104	0.89	-0.7
3,710,130	+		Echvi_3104	0.89	-1.8
3,710,167	+				+1.1
3,710,168	-				+0.3
3,710,168	-				+0.7
3,710,168	-				-1.2
3,710,168	-				-0.2
3,710,168	-				+1.0
3,710,176	-				-2.1
3,710,291	-				-1.0
3,710,291	-				+0.1
3,710,293	-				+0.2
3,710,293	-				-0.5
3,710,296	+				-1.1
3,710,297	-				-0.1
3,710,297	-				+0.1
3,710,309	-				+0.3
3,710,348	+				-0.1
3,710,348	+				-1.4
3,710,348	+				-0.0
3,710,359	+				-0.8
3,710,383	+				-0.2
3,710,393	+				+0.0
3,710,393	+				-0.8
3,710,394	-				-1.3
3,710,394	-				-0.7
3,710,431	-				-0.0
3,710,495	-				+1.1
3,710,502	+				+0.6
3,710,510	+				-1.4
3,710,510	+				-1.4
3,710,522	-				+0.3
3,710,608	+				+0.0
3,710,608	+				-0.3
3,710,608	+				-0.6
3,710,619	+				+0.1
3,710,619	+				-0.4
3,710,620	-				+0.8
3,710,620	-				+1.1
3,710,777	-		Echvi_3105	0.15	+0.6
3,710,777	-		Echvi_3105	0.15	+1.2
3,710,786	+		Echvi_3105	0.15	-0.4
3,710,812	+		Echvi_3105	0.16	-0.4
3,710,813	-		Echvi_3105	0.16	+0.1
3,710,813	-		Echvi_3105	0.16	+0.2
3,710,890	+		Echvi_3105	0.18	-0.1
3,710,982	+		Echvi_3105	0.22	-1.7
3,710,988	+		Echvi_3105	0.22	+0.8
3,710,989	-		Echvi_3105	0.22	-1.2
3,710,989	-		Echvi_3105	0.22	+0.3
3,711,031	+		Echvi_3105	0.23	-1.6
3,711,031	+		Echvi_3105	0.23	+0.6
3,711,031	+		Echvi_3105	0.23	-0.3
3,711,082	+		Echvi_3105	0.25	-0.4
3,711,109	+		Echvi_3105	0.26	-0.5
3,711,109	+		Echvi_3105	0.26	-1.6
3,711,110	-		Echvi_3105	0.26	+0.4
3,711,110	-		Echvi_3105	0.26	-0.8
3,711,116	+		Echvi_3105	0.26	+0.4
3,711,116	+		Echvi_3105	0.26	+0.3
3,711,117	-		Echvi_3105	0.26	-0.6
3,711,132	-		Echvi_3105	0.26	+1.6
3,711,168	-		Echvi_3105	0.28	-0.5
3,711,168	-		Echvi_3105	0.28	+0.4
3,711,168	-		Echvi_3105	0.28	+0.5
3,711,178	+		Echvi_3105	0.28	-0.1
3,711,178	+		Echvi_3105	0.28	+0.1
3,711,178	+		Echvi_3105	0.28	+0.0
3,711,178	+		Echvi_3105	0.28	+0.0
3,711,178	+		Echvi_3105	0.28	-0.3
3,711,179	-		Echvi_3105	0.28	-2.5
3,711,179	-		Echvi_3105	0.28	-0.4
3,711,247	-		Echvi_3105	0.30	-0.2
3,711,247	-		Echvi_3105	0.30	+1.4
3,711,249	+		Echvi_3105	0.30	+0.4
3,711,250	-		Echvi_3105	0.30	-1.3
3,711,278	+		Echvi_3105	0.31	+0.0
3,711,278	+		Echvi_3105	0.31	+1.2
3,711,305	+		Echvi_3105	0.32	+0.4
3,711,310	+		Echvi_3105	0.32	-0.2
3,711,310	+		Echvi_3105	0.32	+0.4
3,711,313	+		Echvi_3105	0.32	-0.0
3,711,350	-		Echvi_3105	0.34	-0.2
3,711,390	+		Echvi_3105	0.35	-1.4
3,711,390	+		Echvi_3105	0.35	+0.3
3,711,390	+		Echvi_3105	0.35	-1.8
3,711,390	+		Echvi_3105	0.35	-0.4
3,711,391	-		Echvi_3105	0.35	-0.2
3,711,391	-		Echvi_3105	0.35	-1.0
3,711,391	-		Echvi_3105	0.35	-0.9
3,711,391	-		Echvi_3105	0.35	-1.1
3,711,391	-		Echvi_3105	0.35	+2.4
3,711,391	-		Echvi_3105	0.35	+0.0
3,711,391	-		Echvi_3105	0.35	+0.6
3,711,391	-		Echvi_3105	0.35	-0.4
3,711,391	-		Echvi_3105	0.35	-0.7
3,711,456	+		Echvi_3105	0.37	-0.4
3,711,467	+				+3.1
3,711,467	+		Echvi_3105	0.38	+2.0
3,711,596	+		Echvi_3105	0.42	-2.1
3,711,596	+		Echvi_3105	0.42	+0.2
3,711,597	-		Echvi_3105	0.42	-0.4
3,711,601	+		Echvi_3105	0.42	-1.7
3,711,616	-		Echvi_3105	0.43	+0.5
3,711,633	+		Echvi_3105	0.43	+0.3
3,711,638	-		Echvi_3105	0.43	+0.4
3,711,723	+		Echvi_3105	0.46	-0.7
3,711,812	-		Echvi_3105	0.49	-1.0
3,711,844	-		Echvi_3105	0.50	+0.0
3,711,844	-		Echvi_3105	0.50	-1.1
3,711,848	-		Echvi_3105	0.50	+0.8
3,711,867	+		Echvi_3105	0.51	-1.4
3,711,868	-		Echvi_3105	0.51	+0.1
3,711,871	+		Echvi_3105	0.51	-1.5
3,711,871	+		Echvi_3105	0.51	-0.5
3,711,872	-		Echvi_3105	0.51	+0.0
3,711,899	+		Echvi_3105	0.52	-0.8
3,712,004	+		Echvi_3105	0.55	+0.7
3,712,023	+		Echvi_3105	0.56	-1.0
3,712,027	+		Echvi_3105	0.56	-0.4
3,712,028	-		Echvi_3105	0.56	-1.0
3,712,028	-		Echvi_3105	0.56	-1.5
3,712,045	-		Echvi_3105	0.57	+0.0
3,712,129	+		Echvi_3105	0.60	-0.6
3,712,230	-		Echvi_3105	0.63	-1.7
3,712,235	-		Echvi_3105	0.63	-0.3
3,712,256	-		Echvi_3105	0.64	-0.4
3,712,267	+		Echvi_3105	0.64	+0.6
3,712,291	+		Echvi_3105	0.65	+0.6
3,712,293	+		Echvi_3105	0.65	-0.9
3,712,293	+		Echvi_3105	0.65	-0.4
3,712,302	+		Echvi_3105	0.65	+1.3
3,712,303	-		Echvi_3105	0.65	-1.4
3,712,434	+		Echvi_3105	0.70	+0.8
3,712,473	-		Echvi_3105	0.71	-0.3
3,712,557	+		Echvi_3105	0.74	+0.1
3,712,620	+		Echvi_3105	0.76	-0.6
3,712,620	+		Echvi_3105	0.76	-0.4
3,712,621	-		Echvi_3105	0.76	-0.1
3,712,621	-		Echvi_3105	0.76	-1.3
3,712,747	+		Echvi_3105	0.80	-0.4
3,712,748	-		Echvi_3105	0.80	-0.0
3,712,748	-		Echvi_3105	0.80	-2.0
3,712,853	+		Echvi_3105	0.83	-1.1
3,712,970	+		Echvi_3105	0.87	-0.6
3,713,163	+				+1.1
3,713,231	-				+0.6
3,713,287	+				+0.1
3,713,350	+				-0.3
3,713,355	-				-0.2
3,713,452	+				-0.2
3,713,624	-				+0.9
3,713,628	-				+0.7
3,713,628	-				+0.8
3,713,679	-				+1.4
3,713,684	+				-1.2
3,713,687	+				-0.5
3,713,688	-				-0.2
3,713,691	+				-1.2
3,713,691	+				+0.7
3,713,691	+				-1.3
3,713,691	+				+0.3
3,713,691	+				-0.0
3,713,692	-				+0.8
3,713,692	-				-0.6
3,713,905	-		Echvi_3106	0.22	-0.1
3,713,921	+		Echvi_3106	0.24	+2.3
3,713,921	+		Echvi_3106	0.24	+0.2
3,713,921	+		Echvi_3106	0.24	-1.8
3,713,922	-		Echvi_3106	0.24	+1.6
3,713,975	+		Echvi_3106	0.28	-0.4
3,713,976	-		Echvi_3106	0.28	+0.4
3,714,106	+		Echvi_3106	0.38	+1.2
3,714,143	-		Echvi_3106	0.40	-0.2
3,714,146	-		Echvi_3106	0.41	+1.1
3,714,275	+		Echvi_3106	0.50	-0.2
3,714,275	+		Echvi_3106	0.50	+0.6