Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3104

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,707,699	+		Echvi_3103	0.35	+0.1
3,707,700	-		Echvi_3103	0.35	+0.1
3,707,731	+		Echvi_3103	0.39	+1.2
3,707,731	+		Echvi_3103	0.39	-0.4
3,707,731	+		Echvi_3103	0.39	-0.1
3,707,731	+		Echvi_3103	0.39	-1.5
3,707,732	-		Echvi_3103	0.39	-1.2
3,707,732	-		Echvi_3103	0.39	+0.1
3,707,783	+		Echvi_3103	0.44	+1.8
3,707,859	-		Echvi_3103	0.51	-1.7
3,707,859	-		Echvi_3103	0.51	-0.1
3,707,859	-		Echvi_3103	0.51	-0.3
3,708,017	+		Echvi_3103	0.66	+0.1
3,708,018	-		Echvi_3103	0.67	-0.8
3,708,027	-		Echvi_3103	0.67	-0.6
3,708,027	-		Echvi_3103	0.67	-2.0
3,708,031	+		Echvi_3103	0.68	-0.3
3,708,032	-		Echvi_3103	0.68	+0.1
3,708,098	+		Echvi_3103	0.74	-1.1
3,708,099	-		Echvi_3103	0.74	+3.1
3,708,099	-		Echvi_3103	0.74	+0.1
3,708,105	+		Echvi_3103	0.75	+0.0
3,708,106	-		Echvi_3103	0.75	-1.5
3,708,106	-		Echvi_3103	0.75	-1.8
3,708,106	-		Echvi_3103	0.75	-3.1
3,708,148	+		Echvi_3103	0.79	-0.6
3,708,155	-		Echvi_3103	0.80	+0.6
3,708,253	+		Echvi_3103	0.90	+1.0
3,708,263	+				+0.1
3,708,264	-				-0.3
3,708,320	+				-0.4
3,708,320	+				-1.8
3,708,320	+				+2.8
3,708,321	-				+0.8
3,708,321	-				-0.6
3,708,321	-				-0.8
3,708,321	-				-1.1
3,708,329	+				-0.1
3,708,332	+				+0.8
3,708,333	-				+0.1
3,708,333	-				+0.7
3,708,353	+				+0.8
3,708,354	-				+0.3
3,708,436	+				-1.4
3,708,436	+				-1.3
3,708,436	+				+0.3
3,708,437	-				+0.3
3,708,437	-				-0.2
3,708,437	-				+0.1
3,708,437	-				+0.3
3,708,518	-				-0.1
3,708,536	-				+2.1
3,708,623	+				-0.4
3,708,725	-				+0.1
3,708,750	+				+0.3
3,708,750	+				-1.0
3,708,750	+				-0.5
3,708,751	-				+1.2
3,708,983	+		Echvi_3104	0.21	+0.1
3,708,987	+		Echvi_3104	0.21	+0.7
3,708,987	+		Echvi_3104	0.21	+0.6
3,708,988	-		Echvi_3104	0.21	+0.0
3,709,013	-		Echvi_3104	0.23	-0.6
3,709,014	+		Echvi_3104	0.23	+0.7
3,709,014	+		Echvi_3104	0.23	-0.2
3,709,015	-		Echvi_3104	0.23	-0.8
3,709,015	-		Echvi_3104	0.23	-0.2
3,709,061	+		Echvi_3104	0.26	+0.3
3,709,083	+		Echvi_3104	0.27	-0.7
3,709,083	+		Echvi_3104	0.27	+1.2
3,709,091	-		Echvi_3104	0.27	-0.4
3,709,098	+		Echvi_3104	0.28	+0.6
3,709,159	-		Echvi_3104	0.31	+0.3
3,709,169	-		Echvi_3104	0.32	+0.2
3,709,170	+		Echvi_3104	0.32	+0.8
3,709,171	-		Echvi_3104	0.32	+0.3
3,709,181	-		Echvi_3104	0.33	-1.1
3,709,254	+		Echvi_3104	0.37	-0.2
3,709,255	-		Echvi_3104	0.37	+1.4
3,709,255	-		Echvi_3104	0.37	-0.2
3,709,319	+		Echvi_3104	0.41	-0.0
3,709,320	-		Echvi_3104	0.41	-0.1
3,709,326	+		Echvi_3104	0.41	-0.5
3,709,327	-		Echvi_3104	0.41	-0.2
3,709,327	-		Echvi_3104	0.41	-0.6
3,709,327	-		Echvi_3104	0.41	-0.3
3,709,327	-		Echvi_3104	0.41	+0.6
3,709,399	-		Echvi_3104	0.46	-1.2
3,709,468	+		Echvi_3104	0.50	-0.9
3,709,469	-		Echvi_3104	0.50	-0.3
3,709,545	+		Echvi_3104	0.54	-0.0
3,709,629	+		Echvi_3104	0.59	-0.1
3,709,629	+		Echvi_3104	0.59	+0.1
3,709,735	+		Echvi_3104	0.66	+0.2
3,709,746	+		Echvi_3104	0.66	-0.4
3,709,746	+		Echvi_3104	0.66	+0.5
3,709,746	+		Echvi_3104	0.66	-0.7
3,709,746	+		Echvi_3104	0.66	-0.3
3,709,747	-		Echvi_3104	0.66	+0.0
3,709,747	-		Echvi_3104	0.66	+0.1
3,709,747	-		Echvi_3104	0.66	+0.7
3,709,803	-		Echvi_3104	0.70	-0.3
3,709,881	+		Echvi_3104	0.74	-0.8
3,709,893	-		Echvi_3104	0.75	+0.3
3,709,893	-		Echvi_3104	0.75	+0.2
3,709,942	+		Echvi_3104	0.78	-0.4
3,709,943	-		Echvi_3104	0.78	+0.6
3,709,943	-		Echvi_3104	0.78	+1.2
3,709,976	+		Echvi_3104	0.80	+0.8
3,709,976	+		Echvi_3104	0.80	+0.4
3,709,976	+		Echvi_3104	0.80	+0.6
3,709,976	+		Echvi_3104	0.80	+1.2
3,709,977	-		Echvi_3104	0.80	+0.5
3,709,977	-		Echvi_3104	0.80	-1.6
3,709,985	+		Echvi_3104	0.81	-0.1
3,709,986	-		Echvi_3104	0.81	-1.1
3,710,017	+		Echvi_3104	0.83	-2.4
3,710,017	+		Echvi_3104	0.83	-0.0
3,710,017	+		Echvi_3104	0.83	+0.6
3,710,017	+		Echvi_3104	0.83	+0.1
3,710,017	+		Echvi_3104	0.83	-0.1
3,710,018	-		Echvi_3104	0.83	-0.4
3,710,020	-		Echvi_3104	0.83	-1.0
3,710,061	+		Echvi_3104	0.85	-0.4
3,710,062	-		Echvi_3104	0.85	-1.0
3,710,109	+		Echvi_3104	0.88	-0.6
3,710,110	-		Echvi_3104	0.88	-0.6
3,710,110	-		Echvi_3104	0.88	+0.9
3,710,128	+		Echvi_3104	0.89	-0.6
3,710,128	+		Echvi_3104	0.89	-2.0
3,710,129	-		Echvi_3104	0.89	-0.2
3,710,130	+		Echvi_3104	0.89	-0.1
3,710,130	+		Echvi_3104	0.89	-0.1
3,710,130	+		Echvi_3104	0.89	-0.7
3,710,130	+		Echvi_3104	0.89	-1.8
3,710,167	+				+1.1
3,710,168	-				+0.3
3,710,168	-				+0.7
3,710,168	-				-1.2
3,710,168	-				-0.2
3,710,168	-				+1.0
3,710,176	-				-2.1
3,710,291	-				-1.0
3,710,291	-				+0.1
3,710,293	-				+0.2
3,710,293	-				-0.5
3,710,296	+				-1.1
3,710,297	-				-0.1
3,710,297	-				+0.1
3,710,309	-				+0.3
3,710,348	+				-0.1
3,710,348	+				-1.4
3,710,348	+				-0.0
3,710,359	+				-0.8
3,710,383	+				-0.2
3,710,393	+				+0.0
3,710,393	+				-0.8
3,710,394	-				-1.3
3,710,394	-				-0.7
3,710,431	-				-0.0
3,710,495	-				+1.1
3,710,502	+				+0.6
3,710,510	+				-1.4
3,710,510	+				-1.4
3,710,522	-				+0.3
3,710,608	+				+0.0
3,710,608	+				-0.3
3,710,608	+				-0.6
3,710,619	+				+0.1
3,710,619	+				-0.4
3,710,620	-				+0.8
3,710,620	-				+1.1
3,710,777	-		Echvi_3105	0.15	+0.6
3,710,777	-		Echvi_3105	0.15	+1.2
3,710,786	+		Echvi_3105	0.15	-0.4
3,710,812	+		Echvi_3105	0.16	-0.4
3,710,813	-		Echvi_3105	0.16	+0.1
3,710,813	-		Echvi_3105	0.16	+0.2
3,710,890	+		Echvi_3105	0.18	-0.1
3,710,982	+		Echvi_3105	0.22	-1.7
3,710,988	+		Echvi_3105	0.22	+0.8
3,710,989	-		Echvi_3105	0.22	-1.2
3,710,989	-		Echvi_3105	0.22	+0.3
3,711,031	+		Echvi_3105	0.23	-1.6
3,711,031	+		Echvi_3105	0.23	+0.6
3,711,031	+		Echvi_3105	0.23	-0.3
3,711,082	+		Echvi_3105	0.25	-0.4
3,711,109	+		Echvi_3105	0.26	-0.5
3,711,109	+		Echvi_3105	0.26	-1.6
3,711,110	-		Echvi_3105	0.26	+0.4
3,711,110	-		Echvi_3105	0.26	-0.8
3,711,116	+		Echvi_3105	0.26	+0.4
3,711,116	+		Echvi_3105	0.26	+0.3
3,711,117	-		Echvi_3105	0.26	-0.6
3,711,132	-		Echvi_3105	0.26	+1.6
3,711,168	-		Echvi_3105	0.28	-0.5
3,711,168	-		Echvi_3105	0.28	+0.4
3,711,168	-		Echvi_3105	0.28	+0.5
3,711,178	+		Echvi_3105	0.28	-0.1
3,711,178	+		Echvi_3105	0.28	+0.1
3,711,178	+		Echvi_3105	0.28	+0.0
3,711,178	+		Echvi_3105	0.28	+0.0
3,711,178	+		Echvi_3105	0.28	-0.3
3,711,179	-		Echvi_3105	0.28	-2.5
3,711,179	-		Echvi_3105	0.28	-0.4
3,711,247	-		Echvi_3105	0.30	-0.2
3,711,247	-		Echvi_3105	0.30	+1.4
3,711,249	+		Echvi_3105	0.30	+0.4
3,711,250	-		Echvi_3105	0.30	-1.3
3,711,278	+		Echvi_3105	0.31	+0.0
3,711,278	+		Echvi_3105	0.31	+1.2
3,711,305	+		Echvi_3105	0.32	+0.4