Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2843

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,404,928	+		Echvi_2842	0.75	+0.6
3,404,946	+		Echvi_2842	0.76	-0.6
3,404,947	-		Echvi_2842	0.76	+0.2
3,405,106	+		Echvi_2842	0.82	+1.0
3,405,106	+		Echvi_2842	0.82	+0.2
3,405,107	-		Echvi_2842	0.82	+0.8
3,405,141	+		Echvi_2842	0.84	+1.0
3,405,143	+		Echvi_2842	0.84	+2.6
3,405,222	-		Echvi_2842	0.87	-0.0
3,405,222	-		Echvi_2842	0.87	-0.6
3,405,224	+		Echvi_2842	0.87	-1.0
3,405,224	+		Echvi_2842	0.87	-0.7
3,405,225	-		Echvi_2842	0.87	-0.5
3,405,228	+		Echvi_2842	0.87	+0.1
3,405,228	+		Echvi_2842	0.87	+0.1
3,405,228	+		Echvi_2842	0.87	-1.1
3,405,228	+		Echvi_2842	0.87	-0.7
3,405,250	+		Echvi_2842	0.88	-1.4
3,405,310	+				-0.3
3,405,357	+				+0.9
3,405,383	-				+0.0
3,405,403	-				-1.1
3,405,403	-				+0.5
3,405,406	+				-1.2
3,405,407	-				-1.2
3,405,417	+				-0.3
3,405,423	-				+0.7
3,405,475	+				+0.3
3,405,476	-				-0.0
3,405,543	+				+0.4
3,405,544	-				-0.5
3,405,544	-				+1.1
3,405,544	-				+0.1
3,405,582	-				+0.0
3,405,655	+				-2.0
3,405,655	+				-1.1
3,405,656	-				-0.8
3,405,656	-				+0.5
3,405,659	-				+0.0
3,405,666	+				+0.3
3,405,689	+				-0.9
3,405,690	-				-0.5
3,405,849	+				+0.4
3,405,849	+				-1.2
3,405,849	+				+0.7
3,405,849	+				-0.2
3,405,850	-				+1.0
3,405,850	-				+0.2
3,405,850	-				-0.3
3,405,888	-				+0.3
3,405,888	-				+0.5
3,405,903	-				-0.2
3,405,937	+				+0.2
3,405,950	-				+0.0
3,406,020	-		Echvi_2843	0.13	+0.3
3,406,075	-		Echvi_2843	0.18	+0.1
3,406,095	+		Echvi_2843	0.19	+0.1
3,406,096	-		Echvi_2843	0.19	-0.5
3,406,126	+		Echvi_2843	0.22	+1.0
3,406,127	-		Echvi_2843	0.22	-0.6
3,406,127	-		Echvi_2843	0.22	+0.5
3,406,129	+		Echvi_2843	0.22	+0.4
3,406,130	-		Echvi_2843	0.22	-0.5
3,406,155	-		Echvi_2843	0.25	-0.9
3,406,155	-		Echvi_2843	0.25	-1.1
3,406,155	-		Echvi_2843	0.25	+0.6
3,406,156	+		Echvi_2843	0.25	+0.6
3,406,156	+		Echvi_2843	0.25	+0.3
3,406,159	+		Echvi_2843	0.25	+0.9
3,406,159	+		Echvi_2843	0.25	+0.4
3,406,167	+		Echvi_2843	0.26	-1.9
3,406,183	+		Echvi_2843	0.27	+1.6
3,406,221	+		Echvi_2843	0.30	-0.4
3,406,222	-		Echvi_2843	0.31	-0.4
3,406,253	+		Echvi_2843	0.33	+0.5
3,406,253	+		Echvi_2843	0.33	+0.6
3,406,262	+		Echvi_2843	0.34	+0.0
3,406,263	-		Echvi_2843	0.34	-0.2
3,406,263	-		Echvi_2843	0.34	+0.8
3,406,266	+		Echvi_2843	0.34	+0.6
3,406,267	-		Echvi_2843	0.35	-0.1
3,406,267	-		Echvi_2843	0.35	+0.6
3,406,292	-		Echvi_2843	0.37	+0.5
3,406,352	+		Echvi_2843	0.42	+1.1
3,406,352	+		Echvi_2843	0.42	-0.4
3,406,352	+		Echvi_2843	0.42	+0.2
3,406,352	+		Echvi_2843	0.42	-0.1
3,406,352	+		Echvi_2843	0.42	-0.6
3,406,353	-		Echvi_2843	0.42	+1.4
3,406,353	-		Echvi_2843	0.42	-0.4
3,406,354	+		Echvi_2843	0.42	+0.9
3,406,355	-		Echvi_2843	0.42	+0.6
3,406,374	+		Echvi_2843	0.44	+0.5
3,406,423	+		Echvi_2843	0.48	+0.3
3,406,456	-		Echvi_2843	0.51	-0.2
3,406,474	+		Echvi_2843	0.53	-2.1
3,406,474	+		Echvi_2843	0.53	+1.9
3,406,474	+		Echvi_2843	0.53	-0.7
3,406,474	+		Echvi_2843	0.53	+0.7
3,406,475	-		Echvi_2843	0.53	+1.3
3,406,483	-		Echvi_2843	0.54	-0.5
3,406,504	-		Echvi_2843	0.56	+0.5
3,406,516	-		Echvi_2843	0.57	+1.5
3,406,518	+		Echvi_2843	0.57	-0.5
3,406,526	-				+2.6
3,406,578	-		Echvi_2843	0.62	+0.2
3,406,587	-		Echvi_2843	0.63	+0.2
3,406,604	-		Echvi_2843	0.64	+0.7
3,406,640	-		Echvi_2843	0.68	-0.5
3,406,650	-		Echvi_2843	0.69	-0.6
3,406,650	-		Echvi_2843	0.69	-1.3
3,406,654	+		Echvi_2843	0.69	+0.0
3,406,655	-		Echvi_2843	0.69	+0.6
3,406,695	+		Echvi_2843	0.73	-0.7
3,406,704	-		Echvi_2843	0.73	+0.8
3,406,732	+		Echvi_2843	0.76	-0.5
3,406,736	-		Echvi_2843	0.76	-0.4
3,406,771	+		Echvi_2843	0.79	+0.4
3,406,772	-		Echvi_2843	0.79	-0.3
3,406,775	-		Echvi_2843	0.80	+0.6
3,406,792	+		Echvi_2843	0.81	+0.2
3,406,793	-		Echvi_2843	0.81	+0.1
3,406,826	-		Echvi_2843	0.84	-0.2
3,406,828	+		Echvi_2843	0.84	+0.2
3,406,847	+		Echvi_2843	0.86	+0.8
3,406,847	+		Echvi_2843	0.86	+0.0
3,406,921	+				+0.5
3,406,922	-				+0.2
3,406,953	-				-0.5
3,406,969	+				+0.3
3,406,970	-				-1.0
3,406,970	-				-0.8
3,406,977	-				+0.4
3,406,977	-				-0.6
3,406,981	+				-1.2
3,407,033	+				+0.4
3,407,034	-				+0.1
3,407,041	+				-0.8
3,407,041	+				+0.8
3,407,042	-				+0.4
3,407,094	-		Echvi_2844	0.17	-0.5
3,407,130	-		Echvi_2844	0.22	-0.6
3,407,132	+		Echvi_2844	0.22	-0.3
3,407,132	+		Echvi_2844	0.22	+0.5
3,407,133	-		Echvi_2844	0.23	-0.2
3,407,153	-		Echvi_2844	0.26	-0.2
3,407,158	+		Echvi_2844	0.26	+0.0
3,407,222	+		Echvi_2844	0.36	-1.0
3,407,256	+		Echvi_2844	0.41	+0.6
3,407,291	-		Echvi_2844	0.47	-0.6
3,407,360	-		Echvi_2844	0.57	-0.1
3,407,466	-		Echvi_2844	0.74	+0.1
3,407,503	+		Echvi_2844	0.79	-0.6
3,407,504	-		Echvi_2844	0.79	-0.1
3,407,553	+		Echvi_2844	0.87	-1.9
3,407,554	-		Echvi_2844	0.87	+0.9
3,407,554	-		Echvi_2844	0.87	-0.5
3,407,555	+		Echvi_2844	0.87	-0.4
3,407,556	-		Echvi_2844	0.87	-1.1
3,407,627	-				+0.4
3,407,644	-				+1.1
3,407,644	-				+0.0
3,407,648	+				+0.7
3,407,649	-				+0.9
3,407,649	-				+0.1
3,407,649	-				-0.3
3,407,649	-				+0.3
3,407,650	+				-0.3
3,407,659	-				-0.9
3,407,672	+				-0.4
3,407,672	+				-0.9
3,407,672	+				+0.3
3,407,673	-				-1.4
3,407,676	+				-0.9
3,407,677	-				-1.0
3,407,720	+				+0.7
3,407,720	+				+0.3
3,407,721	-				+0.2
3,407,723	+				+1.0
3,407,723	+				+0.5
3,407,723	+				+0.1
3,407,733	-				-0.3
3,407,879	+		Echvi_2845	0.13	+0.1
3,407,942	+		Echvi_2845	0.19	+2.2
3,407,949	+		Echvi_2845	0.19	-0.2
3,407,949	+		Echvi_2845	0.19	-0.1
3,407,950	-		Echvi_2845	0.20	-1.3
3,407,976	+		Echvi_2845	0.22	-0.6