Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2045

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
2,412,588	+		Echvi_2043	0.88	+2.2
2,412,588	+		Echvi_2043	0.88	+0.1
2,412,588	+		Echvi_2043	0.88	+0.7
2,412,588	+		Echvi_2043	0.88	+2.7
2,412,588	+		Echvi_2043	0.88	+0.9
2,412,589	-		Echvi_2043	0.88	-2.3
2,412,589	-		Echvi_2043	0.88	+0.1
2,412,589	-		Echvi_2043	0.88	-0.6
2,412,589	-		Echvi_2043	0.88	+0.5
2,412,589	-		Echvi_2043	0.88	+0.2
2,412,589	-		Echvi_2043	0.88	-0.3
2,412,596	-		Echvi_2043	0.89	+0.6
2,412,596	-		Echvi_2043	0.89	+0.2
2,412,613	+		Echvi_2043	0.90	+0.2
2,412,614	-		Echvi_2043	0.90	-0.1
2,412,614	-		Echvi_2043	0.90	+0.2
2,412,620	-		Echvi_2043	0.90	+0.3
2,412,620	-		Echvi_2043	0.90	+0.6
2,412,641	-				-0.3
2,412,677	+				+2.3
2,412,678	-				-0.1
2,412,698	-				+0.2
2,412,700	+				-0.3
2,412,700	+				+0.6
2,412,701	-				+0.6
2,412,711	-				+1.3
2,412,711	-				+0.6
2,412,711	-				-0.2
2,412,716	+				-0.6
2,412,723	+				+0.6
2,412,723	+				+0.6
2,412,724	-				+1.4
2,412,724	-				-0.3
2,412,740	-				-0.8
2,412,740	-				-0.5
2,412,744	+				+0.2
2,412,744	+				-1.6
2,412,744	+				+0.7
2,412,744	+				+0.1
2,412,744	+				-0.1
2,412,745	-				-1.3
2,412,804	+				+3.1
2,412,830	-				+0.4
2,412,882	-				-3.0
2,412,887	-				-1.2
2,412,894	-				-0.6
2,412,896	+				-0.2
2,412,905	+				-1.4
2,412,966	+		Echvi_2044	0.14	+0.2
2,412,992	+		Echvi_2044	0.18	-0.4
2,412,992	+		Echvi_2044	0.18	+0.3
2,412,999	+		Echvi_2044	0.19	+0.4
2,413,015	-		Echvi_2044	0.22	+0.7
2,413,029	-		Echvi_2044	0.24	+0.7
2,413,037	-		Echvi_2044	0.26	+0.4
2,413,037	-		Echvi_2044	0.26	-1.4
2,413,040	+		Echvi_2044	0.26	+0.8
2,413,073	-		Echvi_2044	0.32	+0.7
2,413,184	+		Echvi_2044	0.50	-0.0
2,413,192	+		Echvi_2044	0.52	-1.3
2,413,221	+		Echvi_2044	0.57	-0.8
2,413,222	-		Echvi_2044	0.57	+0.9
2,413,222	-		Echvi_2044	0.57	+0.2
2,413,251	+		Echvi_2044	0.62	+0.1
2,413,252	-		Echvi_2044	0.62	+1.7
2,413,257	+		Echvi_2044	0.63	-0.2
2,413,258	-		Echvi_2044	0.63	-1.4
2,413,276	+		Echvi_2044	0.66	-0.9
2,413,279	+		Echvi_2044	0.66	-0.8
2,413,280	-		Echvi_2044	0.66	-0.5
2,413,280	-		Echvi_2044	0.66	-0.3
2,413,282	+		Echvi_2044	0.67	-0.6
2,413,282	+		Echvi_2044	0.67	-4.0
2,413,283	-		Echvi_2044	0.67	+0.5
2,413,416	+		Echvi_2044	0.89	+0.4
2,413,424	+				+0.8
2,413,424	+				-0.7
2,413,456	+				-0.4
2,413,472	+				-0.1
2,413,473	-				-0.3
2,413,482	+				+0.7
2,413,482	+				-0.1
2,413,483	-				-0.1
2,413,485	-				+0.4
2,413,500	+				+0.7
2,413,500	+				-1.5
2,413,500	+				+0.7
2,413,501	-				+1.7
2,413,501	-				-1.0
2,413,501	-				-0.6
2,413,502	+				-0.3
2,413,502	+				+0.1
2,413,502	+				+0.7
2,413,502	+				+0.3
2,413,503	-				+0.3
2,413,503	-				-0.0
2,413,503	-				-2.6
2,413,504	+				-0.3
2,413,504	+				-0.2
2,413,504	+				-0.5
2,413,504	+				-0.4
2,413,504	+				+0.2
2,413,504	+				-0.4
2,413,505	-				+2.3
2,413,505	-				+0.3
2,413,505	-				-0.5
2,413,505	-				+0.2
2,413,505	-				+0.0
2,413,505	-				+1.2
2,413,508	-				-0.3
2,413,615	+				-1.1
2,413,616	-				-0.4
2,413,616	-				-0.0
2,413,616	-				-1.0
2,413,623	+				+1.1
2,413,624	-				-0.2
2,413,624	-				-0.1
2,413,624	-				-2.6
2,413,624	-				+0.6
2,413,625	+				+0.3
2,413,626	-				+0.7
2,413,703	+				-0.1
2,413,703	+				-1.1
2,413,750	+		Echvi_2045	0.11	-0.7
2,413,825	-		Echvi_2045	0.15	+0.1
2,413,830	+		Echvi_2045	0.15	+0.6
2,413,831	-		Echvi_2045	0.15	+0.7
2,413,848	-		Echvi_2045	0.16	-1.5
2,413,862	-		Echvi_2045	0.17	+1.0
2,413,939	+		Echvi_2045	0.21	-1.3
2,413,939	+		Echvi_2045	0.21	+0.0
2,413,939	+		Echvi_2045	0.21	-1.6
2,413,939	+		Echvi_2045	0.21	-0.5
2,413,983	-		Echvi_2045	0.24	+1.2
2,413,983	-		Echvi_2045	0.24	-0.3
2,414,003	+		Echvi_2045	0.25	+1.5
2,414,003	+		Echvi_2045	0.25	-0.2
2,414,004	-		Echvi_2045	0.25	+0.5
2,414,004	-		Echvi_2045	0.25	+0.4
2,414,125	-		Echvi_2045	0.32	+0.0
2,414,125	-		Echvi_2045	0.32	+0.8
2,414,130	+		Echvi_2045	0.32	+0.9
2,414,131	-		Echvi_2045	0.32	+1.5
2,414,131	-		Echvi_2045	0.32	+0.9
2,414,133	-		Echvi_2045	0.32	-0.7
2,414,133	-		Echvi_2045	0.32	-0.4
2,414,200	+		Echvi_2045	0.36	-1.4
2,414,290	+		Echvi_2045	0.41	-0.3
2,414,290	+		Echvi_2045	0.41	-0.3
2,414,296	+		Echvi_2045	0.41	+0.3
2,414,297	-		Echvi_2045	0.41	-0.4
2,414,297	-		Echvi_2045	0.41	+0.2
2,414,330	+		Echvi_2045	0.43	-0.1
2,414,365	+		Echvi_2045	0.45	+0.3
2,414,366	-		Echvi_2045	0.45	-0.1
2,414,370	-		Echvi_2045	0.46	-1.5
2,414,424	-		Echvi_2045	0.49	-0.7
2,414,424	-		Echvi_2045	0.49	+0.7
2,414,471	+		Echvi_2045	0.51	+0.9
2,414,472	-		Echvi_2045	0.51	-0.1
2,414,514	-		Echvi_2045	0.54	-0.4
2,414,530	-		Echvi_2045	0.54	+1.3
2,414,530	-		Echvi_2045	0.54	-0.4
2,414,531	+		Echvi_2045	0.54	+1.3
2,414,531	+		Echvi_2045	0.54	+2.2
2,414,531	+		Echvi_2045	0.54	-0.4
2,414,534	+		Echvi_2045	0.55	+0.2
2,414,534	+		Echvi_2045	0.55	-0.1
2,414,534	+		Echvi_2045	0.55	-0.2
2,414,535	-		Echvi_2045	0.55	-0.5
2,414,535	-		Echvi_2045	0.55	-0.2
2,414,575	-		Echvi_2045	0.57	+1.4
2,414,596	+		Echvi_2045	0.58	-1.1
2,414,619	+		Echvi_2045	0.59	-0.2
2,414,620	-		Echvi_2045	0.59	-1.1
2,414,764	-		Echvi_2045	0.68	-0.3
2,414,771	-		Echvi_2045	0.68	+0.2
2,414,796	-		Echvi_2045	0.69	+0.0
2,414,811	-		Echvi_2045	0.70	-0.0
2,414,852	+		Echvi_2045	0.72	+0.4
2,414,853	-		Echvi_2045	0.72	-0.1
2,414,853	-		Echvi_2045	0.72	+1.3
2,414,853	-		Echvi_2045	0.72	+0.8
2,414,853	-		Echvi_2045	0.72	+0.9
2,414,857	+		Echvi_2045	0.73	-0.3
2,414,910	+		Echvi_2045	0.76	+1.0
2,414,910	+		Echvi_2045	0.76	-0.9
2,414,911	-		Echvi_2045	0.76	-0.1
2,414,967	+		Echvi_2045	0.79	-0.6
2,414,968	-		Echvi_2045	0.79	+0.4
2,415,033	+		Echvi_2045	0.83	+1.7
2,415,143	+		Echvi_2045	0.89	+0.0
2,415,159	+		Echvi_2045	0.90	+0.6
2,415,268	-				-0.5
2,415,268	-				-0.5
2,415,296	+				-1.4
2,415,297	-				-0.4
2,415,297	-				+0.8
2,415,297	-				+0.3
2,415,297	-				-0.7
2,415,326	+				+0.8
2,415,326	+				-1.0
2,415,327	-				+0.2
2,415,346	-				+1.1
2,415,419	+				+0.9
2,415,493	-				+0.3
2,415,516	+				-0.6
2,415,527	+				-0.2
2,415,579	-				-0.2
2,415,615	-				-0.4
2,415,632	-				-0.3
2,415,658	+				+1.2
2,415,659	-				-1.8
2,415,659	-				-1.3
2,415,659	-				+0.2
2,415,712	+		Echvi_2046	0.12	-0.3
2,415,712	+		Echvi_2046	0.12	+0.5
2,415,713	-		Echvi_2046	0.12	+0.2
2,415,713	-		Echvi_2046	0.12	+2.7
2,415,773	-		Echvi_2046	0.22	-1.1
2,415,812	+		Echvi_2046	0.28	-0.2
2,415,812	+		Echvi_2046	0.28	+0.0
2,415,826	-		Echvi_2046	0.30	+0.6
2,415,836	-		Echvi_2046	0.31	+0.5
2,415,872	+		Echvi_2046	0.37	-0.6
2,415,880	+		Echvi_2046	0.38	-0.3
2,415,884	+		Echvi_2046	0.39	+0.4
2,415,884	+		Echvi_2046	0.39	+1.3
2,415,990	+		Echvi_2046	0.55	+0.3
2,415,990	+		Echvi_2046	0.55	-0.7
2,416,029	+		Echvi_2046	0.61	-0.0
2,416,029	+		Echvi_2046	0.61	-0.5
2,416,192	-		Echvi_2046	0.87	+1.0
2,416,192	-		Echvi_2046	0.87	-0.7
2,416,235	+				+1.4
2,416,278	-				-0.3
2,416,279	+				-0.3
2,416,279	+				-0.1
2,416,279	+				+0.3
2,416,279	+				-1.3
2,416,297	+				+2.4
2,416,300	+				-0.1
2,416,301	-				+0.2
2,416,301	-				+1.0
2,416,310	-				+1.0