Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14995 and CA264_15000 are separated by 110 nucleotides CA264_15000 and CA264_15005 are separated by 143 nucleotides
CA264_14995: CA264_14995 - A/G-specific adenine glycosylase, at 3,518,806 to 3,519,897
_14995
CA264_15000: CA264_15000 - single-stranded DNA-binding protein, at 3,520,008 to 3,520,487
_15000
CA264_15005: CA264_15005 - magnesium/cobalt efflux protein, at 3,520,631 to 3,521,884
_15005
Position (kb)
3520
3521 Strain fitness (log2 ratio)
-2
-1
0
1 at 3519.058 kb on + strand, within CA264_14995 at 3519.133 kb on + strand, within CA264_14995 at 3519.153 kb on - strand, within CA264_14995 at 3519.170 kb on - strand, within CA264_14995 at 3519.380 kb on + strand, within CA264_14995 at 3519.381 kb on - strand, within CA264_14995 at 3519.515 kb on - strand, within CA264_14995 at 3519.547 kb on - strand, within CA264_14995 at 3519.561 kb on - strand, within CA264_14995 at 3519.756 kb on + strand, within CA264_14995 at 3519.757 kb on - strand, within CA264_14995 at 3519.804 kb on - strand at 3519.811 kb on + strand at 3519.862 kb on + strand at 3519.893 kb on + strand at 3519.893 kb on + strand at 3519.894 kb on - strand at 3519.947 kb on + strand at 3519.988 kb on + strand at 3519.989 kb on - strand at 3519.992 kb on - strand at 3519.992 kb on - strand at 3520.369 kb on - strand, within CA264_15000 at 3520.401 kb on + strand, within CA264_15000 at 3520.485 kb on + strand at 3520.486 kb on - strand at 3520.490 kb on + strand at 3520.490 kb on + strand at 3520.490 kb on + strand at 3520.491 kb on - strand at 3520.491 kb on - strand at 3520.491 kb on - strand at 3520.491 kb on - strand at 3520.522 kb on + strand at 3520.523 kb on - strand at 3520.548 kb on - strand at 3520.789 kb on + strand, within CA264_15005 at 3520.807 kb on - strand, within CA264_15005 at 3520.816 kb on + strand, within CA264_15005 at 3520.817 kb on - strand, within CA264_15005 at 3520.830 kb on - strand, within CA264_15005 at 3521.038 kb on - strand, within CA264_15005 at 3521.066 kb on + strand, within CA264_15005 at 3521.067 kb on - strand, within CA264_15005 at 3521.349 kb on + strand, within CA264_15005 at 3521.390 kb on - strand, within CA264_15005
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 3,519,058 + CA264_14995 0.23 -1.6 3,519,133 + CA264_14995 0.30 +0.7 3,519,153 - CA264_14995 0.32 -1.2 3,519,170 - CA264_14995 0.33 -0.1 3,519,380 + CA264_14995 0.53 +0.0 3,519,381 - CA264_14995 0.53 -0.5 3,519,515 - CA264_14995 0.65 -0.7 3,519,547 - CA264_14995 0.68 -0.0 3,519,561 - CA264_14995 0.69 +0.8 3,519,756 + CA264_14995 0.87 +1.2 3,519,757 - CA264_14995 0.87 +0.4 3,519,804 - -1.2 3,519,811 + -0.1 3,519,862 + +0.4 3,519,893 + -1.2 3,519,893 + -0.0 3,519,894 - -1.0 3,519,947 + +1.6 3,519,988 + -0.1 3,519,989 - -1.3 3,519,992 - -1.0 3,519,992 - -0.8 3,520,369 - CA264_15000 0.75 -1.0 3,520,401 + CA264_15000 0.82 -0.3 3,520,485 + -0.3 3,520,486 - -0.1 3,520,490 + -1.4 3,520,490 + +0.6 3,520,490 + -1.8 3,520,491 - -1.3 3,520,491 - -1.2 3,520,491 - -2.2 3,520,491 - +0.6 3,520,522 + -0.1 3,520,523 - -1.0 3,520,548 - -1.6 3,520,789 + CA264_15005 0.13 -2.2 3,520,807 - CA264_15005 0.14 +0.2 3,520,816 + CA264_15005 0.15 -0.8 3,520,817 - CA264_15005 0.15 -1.6 3,520,830 - CA264_15005 0.16 -1.1 3,521,038 - CA264_15005 0.32 -1.4 3,521,066 + CA264_15005 0.35 +1.2 3,521,067 - CA264_15005 0.35 -1.0 3,521,349 + CA264_15005 0.57 -0.7 3,521,390 - CA264_15005 0.61 -0.4
Or see this region's nucleotide sequence