Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14500 and CA264_14505 are separated by 52 nucleotides CA264_14505 and CA264_14510 overlap by 8 nucleotides CA264_14510 and CA264_14515 are separated by 76 nucleotides
CA264_14500: CA264_14500 - nucleotidyltransferase, at 3,402,141 to 3,403,148
_14500
CA264_14505: CA264_14505 - hypothetical protein, at 3,403,201 to 3,404,910
_14505
CA264_14510: CA264_14510 - hypothetical protein, at 3,404,903 to 3,405,655
_14510
CA264_14515: CA264_14515 - peptidase M23, at 3,405,732 to 3,406,967
_14515
Position (kb)
3403
3404
3405 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3403.149 kb on + strand at 3403.149 kb on + strand at 3403.150 kb on - strand at 3403.161 kb on + strand at 3403.162 kb on - strand at 3403.165 kb on + strand at 3403.178 kb on + strand at 3403.178 kb on + strand at 3403.342 kb on + strand at 3403.343 kb on - strand at 3403.348 kb on - strand at 3403.394 kb on - strand, within CA264_14505 at 3403.519 kb on + strand, within CA264_14505 at 3403.519 kb on + strand, within CA264_14505 at 3403.520 kb on - strand, within CA264_14505 at 3403.522 kb on + strand, within CA264_14505 at 3403.523 kb on - strand, within CA264_14505 at 3403.523 kb on - strand, within CA264_14505 at 3403.526 kb on - strand, within CA264_14505 at 3403.564 kb on + strand, within CA264_14505 at 3403.648 kb on + strand, within CA264_14505 at 3403.687 kb on + strand, within CA264_14505 at 3403.688 kb on - strand, within CA264_14505 at 3403.852 kb on + strand, within CA264_14505 at 3403.853 kb on - strand, within CA264_14505 at 3403.853 kb on - strand, within CA264_14505 at 3403.974 kb on + strand, within CA264_14505 at 3403.975 kb on - strand, within CA264_14505 at 3403.975 kb on - strand, within CA264_14505 at 3404.175 kb on + strand, within CA264_14505 at 3404.175 kb on + strand, within CA264_14505 at 3404.228 kb on + strand, within CA264_14505 at 3404.228 kb on + strand, within CA264_14505 at 3404.244 kb on + strand, within CA264_14505 at 3404.245 kb on - strand, within CA264_14505 at 3404.245 kb on - strand, within CA264_14505 at 3404.249 kb on + strand, within CA264_14505 at 3404.304 kb on - strand, within CA264_14505 at 3404.488 kb on + strand, within CA264_14505 at 3404.488 kb on + strand, within CA264_14505 at 3404.488 kb on + strand, within CA264_14505 at 3404.578 kb on + strand, within CA264_14505 at 3404.579 kb on - strand, within CA264_14505 at 3404.585 kb on - strand, within CA264_14505 at 3404.671 kb on + strand, within CA264_14505 at 3404.672 kb on - strand, within CA264_14505 at 3404.683 kb on + strand, within CA264_14505 at 3404.713 kb on + strand, within CA264_14505 at 3404.714 kb on - strand, within CA264_14505 at 3404.714 kb on - strand, within CA264_14505 at 3404.714 kb on - strand, within CA264_14505 at 3404.714 kb on - strand, within CA264_14505 at 3404.774 kb on + strand at 3404.775 kb on - strand at 3404.869 kb on + strand at 3404.870 kb on - strand at 3404.902 kb on + strand at 3404.908 kb on + strand at 3404.916 kb on - strand at 3405.012 kb on + strand, within CA264_14510 at 3405.012 kb on + strand, within CA264_14510 at 3405.013 kb on - strand, within CA264_14510 at 3405.019 kb on - strand, within CA264_14510 at 3405.019 kb on - strand, within CA264_14510 at 3405.039 kb on - strand, within CA264_14510 at 3405.197 kb on + strand, within CA264_14510 at 3405.198 kb on - strand, within CA264_14510 at 3405.274 kb on + strand, within CA264_14510 at 3405.274 kb on + strand, within CA264_14510 at 3405.312 kb on - strand, within CA264_14510 at 3405.361 kb on + strand, within CA264_14510 at 3405.362 kb on - strand, within CA264_14510 at 3405.363 kb on + strand, within CA264_14510 at 3405.364 kb on - strand, within CA264_14510 at 3405.364 kb on - strand, within CA264_14510 at 3405.364 kb on - strand, within CA264_14510 at 3405.395 kb on + strand, within CA264_14510 at 3405.400 kb on + strand, within CA264_14510 at 3405.423 kb on + strand, within CA264_14510 at 3405.476 kb on + strand, within CA264_14510 at 3405.476 kb on + strand, within CA264_14510 at 3405.562 kb on + strand, within CA264_14510 at 3405.562 kb on + strand, within CA264_14510 at 3405.563 kb on - strand, within CA264_14510 at 3405.633 kb on - strand at 3405.649 kb on + strand at 3405.654 kb on - strand at 3405.823 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 3,403,149 + -0.5 3,403,149 + -1.5 3,403,150 - -1.4 3,403,161 + -0.1 3,403,162 - -3.3 3,403,165 + +0.1 3,403,178 + +0.1 3,403,178 + +0.4 3,403,342 + +1.1 3,403,343 - +1.1 3,403,348 - +0.2 3,403,394 - CA264_14505 0.11 +0.1 3,403,519 + CA264_14505 0.19 -1.2 3,403,519 + CA264_14505 0.19 +0.5 3,403,520 - CA264_14505 0.19 -1.8 3,403,522 + CA264_14505 0.19 -1.2 3,403,523 - CA264_14505 0.19 +0.0 3,403,523 - CA264_14505 0.19 -0.5 3,403,526 - CA264_14505 0.19 -0.1 3,403,564 + CA264_14505 0.21 +0.5 3,403,648 + CA264_14505 0.26 +0.1 3,403,687 + CA264_14505 0.28 +0.1 3,403,688 - CA264_14505 0.28 -0.5 3,403,852 + CA264_14505 0.38 +0.7 3,403,853 - CA264_14505 0.38 +1.1 3,403,853 - CA264_14505 0.38 -0.7 3,403,974 + CA264_14505 0.45 -0.0 3,403,975 - CA264_14505 0.45 +0.1 3,403,975 - CA264_14505 0.45 +3.1 3,404,175 + CA264_14505 0.57 -2.3 3,404,175 + CA264_14505 0.57 +0.1 3,404,228 + CA264_14505 0.60 -1.2 3,404,228 + CA264_14505 0.60 -0.0 3,404,244 + CA264_14505 0.61 -1.1 3,404,245 - CA264_14505 0.61 -0.5 3,404,245 - CA264_14505 0.61 +0.5 3,404,249 + CA264_14505 0.61 +0.4 3,404,304 - CA264_14505 0.65 -1.2 3,404,488 + CA264_14505 0.75 -0.1 3,404,488 + CA264_14505 0.75 +0.7 3,404,488 + CA264_14505 0.75 -0.2 3,404,578 + CA264_14505 0.81 -0.6 3,404,579 - CA264_14505 0.81 -0.7 3,404,585 - CA264_14505 0.81 +0.7 3,404,671 + CA264_14505 0.86 +0.7 3,404,672 - CA264_14505 0.86 -0.6 3,404,683 + CA264_14505 0.87 -1.9 3,404,713 + CA264_14505 0.88 -0.4 3,404,714 - CA264_14505 0.88 +0.2 3,404,714 - CA264_14505 0.88 -0.2 3,404,714 - CA264_14505 0.88 -0.2 3,404,714 - CA264_14505 0.88 -0.0 3,404,774 + +0.3 3,404,775 - -0.9 3,404,869 + -0.3 3,404,870 - -0.1 3,404,902 + -0.3 3,404,908 + -2.3 3,404,916 - +1.1 3,405,012 + CA264_14510 0.14 -0.3 3,405,012 + CA264_14510 0.14 +0.0 3,405,013 - CA264_14510 0.15 -0.6 3,405,019 - CA264_14510 0.15 +0.1 3,405,019 - CA264_14510 0.15 +0.4 3,405,039 - CA264_14510 0.18 +0.1 3,405,197 + CA264_14510 0.39 -0.5 3,405,198 - CA264_14510 0.39 -1.6 3,405,274 + CA264_14510 0.49 -0.3 3,405,274 + CA264_14510 0.49 +0.5 3,405,312 - CA264_14510 0.54 -0.1 3,405,361 + CA264_14510 0.61 -0.5 3,405,362 - CA264_14510 0.61 +1.0 3,405,363 + CA264_14510 0.61 +0.9 3,405,364 - CA264_14510 0.61 +0.3 3,405,364 - CA264_14510 0.61 -0.1 3,405,364 - CA264_14510 0.61 -0.6 3,405,395 + CA264_14510 0.65 +0.4 3,405,400 + CA264_14510 0.66 -0.1 3,405,423 + CA264_14510 0.69 -0.2 3,405,476 + CA264_14510 0.76 +0.4 3,405,476 + CA264_14510 0.76 +2.1 3,405,562 + CA264_14510 0.88 -0.9 3,405,562 + CA264_14510 0.88 -1.1 3,405,563 - CA264_14510 0.88 +2.1 3,405,633 - +0.3 3,405,649 + -1.2 3,405,654 - -0.5 3,405,823 + -0.9
Or see this region's nucleotide sequence