Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_13365
Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,116,234 | + | CA264_13360 | 0.25 | +1.0 | |
3,116,249 | + | CA264_13360 | 0.27 | -2.4 | |
3,116,260 | + | CA264_13360 | 0.28 | -0.8 | |
3,116,261 | - | CA264_13360 | 0.28 | -0.5 | |
3,116,290 | - | CA264_13360 | 0.32 | +0.0 | |
3,116,290 | - | CA264_13360 | 0.32 | -0.2 | |
3,116,316 | + | CA264_13360 | 0.34 | +2.0 | |
3,116,362 | - | CA264_13360 | 0.39 | -0.2 | |
3,116,566 | + | CA264_13360 | 0.62 | -0.8 | |
3,116,660 | + | CA264_13360 | 0.72 | -0.4 | |
3,116,661 | - | CA264_13360 | 0.72 | -1.5 | |
3,116,917 | + | +0.3 | |||
3,116,917 | + | -1.3 | |||
3,116,940 | + | +1.5 | |||
3,116,940 | + | +0.3 | |||
3,116,941 | - | -1.3 | |||
3,116,942 | + | +0.0 | |||
3,116,944 | + | -0.4 | |||
3,116,944 | + | +0.1 | |||
3,116,945 | - | -0.8 | |||
3,116,959 | - | -0.8 | |||
3,116,959 | - | +0.1 | |||
3,116,978 | - | -0.2 | |||
3,116,989 | + | +0.9 | |||
3,117,063 | + | -2.0 | |||
3,117,086 | - | -2.0 | |||
3,117,087 | + | +0.4 | |||
3,117,425 | - | CA264_13365 | 0.28 | -1.0 | |
3,117,425 | - | CA264_13365 | 0.28 | -0.3 | |
3,118,261 | + | +0.2 | |||
3,118,270 | - | +0.3 | |||
3,118,826 | + | +0.2 | |||
3,118,827 | - | +0.2 | |||
3,118,858 | - | +0.3 | |||
3,119,020 | - | -0.2 | |||
3,119,078 | - | +0.0 | |||
3,119,114 | + | +0.0 | |||
3,119,114 | + | -0.5 |
Or see this region's nucleotide sequence