Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11200 and CA264_11205 are separated by 358 nucleotides CA264_11205 and CA264_11210 are separated by 11 nucleotides
CA264_11200: CA264_11200 - RNA degradosome polyphosphate kinase, at 2,594,078 to 2,596,177
_11200
CA264_11205: CA264_11205 - hypothetical protein, at 2,596,536 to 2,597,477
_11205
CA264_11210: CA264_11210 - ABC transporter ATP-binding protein, at 2,597,489 to 2,598,469
_11210
Position (kb)
2596
2597
2598 Strain fitness (log2 ratio)
-2
-1
0
1 at 2595.718 kb on - strand, within CA264_11200 at 2595.722 kb on - strand, within CA264_11200 at 2595.816 kb on - strand, within CA264_11200 at 2595.818 kb on + strand, within CA264_11200 at 2595.975 kb on + strand at 2596.134 kb on + strand at 2596.139 kb on - strand at 2596.205 kb on + strand at 2596.265 kb on + strand at 2596.280 kb on + strand at 2596.451 kb on + strand at 2596.492 kb on + strand at 2596.569 kb on + strand at 2596.694 kb on + strand, within CA264_11205 at 2596.695 kb on - strand, within CA264_11205 at 2596.702 kb on - strand, within CA264_11205 at 2596.706 kb on + strand, within CA264_11205 at 2596.750 kb on - strand, within CA264_11205 at 2596.751 kb on + strand, within CA264_11205 at 2596.778 kb on - strand, within CA264_11205 at 2596.823 kb on + strand, within CA264_11205 at 2596.924 kb on - strand, within CA264_11205 at 2596.928 kb on + strand, within CA264_11205 at 2596.929 kb on - strand, within CA264_11205 at 2596.932 kb on - strand, within CA264_11205 at 2596.970 kb on + strand, within CA264_11205 at 2596.974 kb on + strand, within CA264_11205 at 2596.974 kb on + strand, within CA264_11205 at 2596.974 kb on + strand, within CA264_11205 at 2596.975 kb on - strand, within CA264_11205 at 2597.173 kb on - strand, within CA264_11205 at 2597.420 kb on + strand at 2597.456 kb on - strand at 2597.475 kb on + strand at 2597.475 kb on + strand at 2597.475 kb on + strand at 2597.483 kb on - strand at 2597.490 kb on + strand at 2597.496 kb on + strand at 2597.528 kb on + strand at 2597.528 kb on + strand at 2597.528 kb on + strand at 2597.529 kb on - strand at 2597.570 kb on + strand at 2597.570 kb on + strand at 2597.576 kb on - strand at 2597.608 kb on - strand, within CA264_11210 at 2597.608 kb on - strand, within CA264_11210 at 2597.690 kb on + strand, within CA264_11210 at 2597.691 kb on - strand, within CA264_11210 at 2597.791 kb on + strand, within CA264_11210 at 2597.794 kb on - strand, within CA264_11210 at 2597.816 kb on + strand, within CA264_11210 at 2597.816 kb on + strand, within CA264_11210 at 2597.816 kb on + strand, within CA264_11210 at 2597.817 kb on - strand, within CA264_11210 at 2597.953 kb on + strand, within CA264_11210 at 2597.953 kb on + strand, within CA264_11210 at 2598.120 kb on - strand, within CA264_11210 at 2598.127 kb on - strand, within CA264_11210 at 2598.170 kb on + strand, within CA264_11210 at 2598.170 kb on + strand, within CA264_11210 at 2598.171 kb on - strand, within CA264_11210 at 2598.288 kb on + strand, within CA264_11210 at 2598.288 kb on + strand, within CA264_11210 at 2598.290 kb on + strand, within CA264_11210 at 2598.291 kb on - strand, within CA264_11210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,595,718 - CA264_11200 0.78 -0.9 2,595,722 - CA264_11200 0.78 -1.7 2,595,816 - CA264_11200 0.83 -1.1 2,595,818 + CA264_11200 0.83 -1.7 2,595,975 + -1.2 2,596,134 + -0.1 2,596,139 - -2.5 2,596,205 + -1.1 2,596,265 + +0.2 2,596,280 + -0.3 2,596,451 + -0.6 2,596,492 + -0.1 2,596,569 + +0.2 2,596,694 + CA264_11205 0.17 +1.4 2,596,695 - CA264_11205 0.17 -0.4 2,596,702 - CA264_11205 0.18 -0.2 2,596,706 + CA264_11205 0.18 -1.1 2,596,750 - CA264_11205 0.23 -0.8 2,596,751 + CA264_11205 0.23 -0.8 2,596,778 - CA264_11205 0.26 -0.6 2,596,823 + CA264_11205 0.30 +1.1 2,596,924 - CA264_11205 0.41 -1.6 2,596,928 + CA264_11205 0.42 +0.9 2,596,929 - CA264_11205 0.42 -0.4 2,596,932 - CA264_11205 0.42 -0.8 2,596,970 + CA264_11205 0.46 -0.1 2,596,974 + CA264_11205 0.46 -0.7 2,596,974 + CA264_11205 0.46 +0.0 2,596,974 + CA264_11205 0.46 +0.2 2,596,975 - CA264_11205 0.47 +0.5 2,597,173 - CA264_11205 0.68 -0.0 2,597,420 + +0.3 2,597,456 - +0.2 2,597,475 + -1.4 2,597,475 + -0.4 2,597,475 + +1.1 2,597,483 - +0.1 2,597,490 + -1.2 2,597,496 + +0.5 2,597,528 + +0.5 2,597,528 + +0.6 2,597,528 + -0.2 2,597,529 - -1.6 2,597,570 + -0.1 2,597,570 + +0.1 2,597,576 - +0.9 2,597,608 - CA264_11210 0.12 -0.1 2,597,608 - CA264_11210 0.12 -0.9 2,597,690 + CA264_11210 0.20 -1.1 2,597,691 - CA264_11210 0.21 +0.4 2,597,791 + CA264_11210 0.31 +1.5 2,597,794 - CA264_11210 0.31 +0.0 2,597,816 + CA264_11210 0.33 -0.1 2,597,816 + CA264_11210 0.33 +0.2 2,597,816 + CA264_11210 0.33 +0.9 2,597,817 - CA264_11210 0.33 -0.5 2,597,953 + CA264_11210 0.47 +1.4 2,597,953 + CA264_11210 0.47 -1.1 2,598,120 - CA264_11210 0.64 +0.3 2,598,127 - CA264_11210 0.65 +0.9 2,598,170 + CA264_11210 0.69 -0.0 2,598,170 + CA264_11210 0.69 +0.0 2,598,171 - CA264_11210 0.70 -0.6 2,598,288 + CA264_11210 0.81 +0.2 2,598,288 + CA264_11210 0.81 +0.2 2,598,290 + CA264_11210 0.82 -0.6 2,598,291 - CA264_11210 0.82 +0.9
Or see this region's nucleotide sequence