Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11195 and CA264_11200 are separated by 133 nucleotides CA264_11200 and CA264_11205 are separated by 358 nucleotides
CA264_11195: CA264_11195 - phosphatase, at 2,593,045 to 2,593,944
_11195
CA264_11200: CA264_11200 - RNA degradosome polyphosphate kinase, at 2,594,078 to 2,596,177
_11200
CA264_11205: CA264_11205 - hypothetical protein, at 2,596,536 to 2,597,477
_11205
Position (kb)
2594
2595
2596
2597 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2593.103 kb on + strand at 2593.144 kb on + strand, within CA264_11195 at 2593.144 kb on + strand, within CA264_11195 at 2593.145 kb on - strand, within CA264_11195 at 2593.194 kb on + strand, within CA264_11195 at 2593.223 kb on + strand, within CA264_11195 at 2593.223 kb on + strand, within CA264_11195 at 2593.224 kb on - strand, within CA264_11195 at 2593.224 kb on - strand, within CA264_11195 at 2593.233 kb on - strand, within CA264_11195 at 2593.276 kb on + strand, within CA264_11195 at 2593.277 kb on - strand, within CA264_11195 at 2593.468 kb on - strand, within CA264_11195 at 2593.609 kb on + strand, within CA264_11195 at 2593.723 kb on + strand, within CA264_11195 at 2593.723 kb on + strand, within CA264_11195 at 2593.724 kb on - strand, within CA264_11195 at 2593.724 kb on - strand, within CA264_11195 at 2593.759 kb on - strand, within CA264_11195 at 2593.814 kb on - strand, within CA264_11195 at 2593.848 kb on + strand, within CA264_11195 at 2593.848 kb on + strand, within CA264_11195 at 2593.979 kb on + strand at 2593.989 kb on - strand at 2593.990 kb on + strand at 2593.991 kb on - strand at 2594.013 kb on + strand at 2594.013 kb on + strand at 2594.023 kb on + strand at 2594.124 kb on - strand at 2594.199 kb on + strand at 2594.226 kb on + strand at 2594.227 kb on - strand at 2594.364 kb on + strand, within CA264_11200 at 2594.735 kb on + strand, within CA264_11200 at 2594.741 kb on + strand, within CA264_11200 at 2594.795 kb on + strand, within CA264_11200 at 2594.796 kb on - strand, within CA264_11200 at 2595.092 kb on + strand, within CA264_11200 at 2595.114 kb on + strand, within CA264_11200 at 2595.718 kb on - strand, within CA264_11200 at 2595.722 kb on - strand, within CA264_11200 at 2595.816 kb on - strand, within CA264_11200 at 2595.818 kb on + strand, within CA264_11200 at 2595.975 kb on + strand at 2596.134 kb on + strand at 2596.139 kb on - strand at 2596.205 kb on + strand at 2596.265 kb on + strand at 2596.280 kb on + strand at 2596.451 kb on + strand at 2596.492 kb on + strand at 2596.569 kb on + strand at 2596.694 kb on + strand, within CA264_11205 at 2596.695 kb on - strand, within CA264_11205 at 2596.702 kb on - strand, within CA264_11205 at 2596.706 kb on + strand, within CA264_11205 at 2596.750 kb on - strand, within CA264_11205 at 2596.751 kb on + strand, within CA264_11205 at 2596.778 kb on - strand, within CA264_11205 at 2596.823 kb on + strand, within CA264_11205 at 2596.924 kb on - strand, within CA264_11205 at 2596.928 kb on + strand, within CA264_11205 at 2596.929 kb on - strand, within CA264_11205 at 2596.932 kb on - strand, within CA264_11205 at 2596.970 kb on + strand, within CA264_11205 at 2596.974 kb on + strand, within CA264_11205 at 2596.974 kb on + strand, within CA264_11205 at 2596.974 kb on + strand, within CA264_11205 at 2596.975 kb on - strand, within CA264_11205 at 2597.173 kb on - strand, within CA264_11205
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,593,103 + -0.7 2,593,144 + CA264_11195 0.11 -1.9 2,593,144 + CA264_11195 0.11 -3.2 2,593,145 - CA264_11195 0.11 -2.7 2,593,194 + CA264_11195 0.17 +0.9 2,593,223 + CA264_11195 0.20 -2.8 2,593,223 + CA264_11195 0.20 -0.1 2,593,224 - CA264_11195 0.20 -0.7 2,593,224 - CA264_11195 0.20 -1.1 2,593,233 - CA264_11195 0.21 -1.9 2,593,276 + CA264_11195 0.26 -3.3 2,593,277 - CA264_11195 0.26 -1.4 2,593,468 - CA264_11195 0.47 -0.5 2,593,609 + CA264_11195 0.63 -1.4 2,593,723 + CA264_11195 0.75 -0.7 2,593,723 + CA264_11195 0.75 -2.4 2,593,724 - CA264_11195 0.75 -0.4 2,593,724 - CA264_11195 0.75 -2.5 2,593,759 - CA264_11195 0.79 -2.7 2,593,814 - CA264_11195 0.85 -2.5 2,593,848 + CA264_11195 0.89 -1.9 2,593,848 + CA264_11195 0.89 -1.9 2,593,979 + -0.7 2,593,989 - -0.8 2,593,990 + +0.2 2,593,991 - -0.9 2,594,013 + -0.3 2,594,013 + -1.0 2,594,023 + -0.5 2,594,124 - +0.9 2,594,199 + -1.2 2,594,226 + -0.3 2,594,227 - -1.1 2,594,364 + CA264_11200 0.14 -2.4 2,594,735 + CA264_11200 0.31 -2.2 2,594,741 + CA264_11200 0.32 -1.4 2,594,795 + CA264_11200 0.34 -1.1 2,594,796 - CA264_11200 0.34 -0.7 2,595,092 + CA264_11200 0.48 -1.3 2,595,114 + CA264_11200 0.49 -0.6 2,595,718 - CA264_11200 0.78 -0.9 2,595,722 - CA264_11200 0.78 -1.7 2,595,816 - CA264_11200 0.83 -1.1 2,595,818 + CA264_11200 0.83 -1.7 2,595,975 + -1.2 2,596,134 + -0.1 2,596,139 - -2.5 2,596,205 + -1.1 2,596,265 + +0.2 2,596,280 + -0.3 2,596,451 + -0.6 2,596,492 + -0.1 2,596,569 + +0.2 2,596,694 + CA264_11205 0.17 +1.4 2,596,695 - CA264_11205 0.17 -0.4 2,596,702 - CA264_11205 0.18 -0.2 2,596,706 + CA264_11205 0.18 -1.1 2,596,750 - CA264_11205 0.23 -0.8 2,596,751 + CA264_11205 0.23 -0.8 2,596,778 - CA264_11205 0.26 -0.6 2,596,823 + CA264_11205 0.30 +1.1 2,596,924 - CA264_11205 0.41 -1.6 2,596,928 + CA264_11205 0.42 +0.9 2,596,929 - CA264_11205 0.42 -0.4 2,596,932 - CA264_11205 0.42 -0.8 2,596,970 + CA264_11205 0.46 -0.1 2,596,974 + CA264_11205 0.46 -0.7 2,596,974 + CA264_11205 0.46 +0.0 2,596,974 + CA264_11205 0.46 +0.2 2,596,975 - CA264_11205 0.47 +0.5 2,597,173 - CA264_11205 0.68 -0.0
Or see this region's nucleotide sequence