Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10775 and CA264_10780 are separated by 100 nucleotides CA264_10780 and CA264_10785 overlap by 1 nucleotides CA264_10785 and CA264_10790 are separated by 400 nucleotides
CA264_10775: CA264_10775 - malonyl CoA-acyl carrier protein transacylase, at 2,489,345 to 2,490,220
_10775
CA264_10780: CA264_10780 - hypothetical protein, at 2,490,321 to 2,490,746
_10780
CA264_10785: CA264_10785 - hypothetical protein, at 2,490,746 to 2,493,337
_10785
CA264_10790: CA264_10790 - succinate dehydrogenase, at 2,493,738 to 2,494,412
_10790
Position (kb)
2490
2491
2492
2493
2494 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2490.262 kb on + strand at 2490.263 kb on - strand at 2490.443 kb on + strand, within CA264_10780 at 2490.443 kb on + strand, within CA264_10780 at 2490.462 kb on + strand, within CA264_10780 at 2490.462 kb on + strand, within CA264_10780 at 2490.521 kb on - strand, within CA264_10780 at 2490.651 kb on + strand, within CA264_10780 at 2490.714 kb on - strand at 2490.774 kb on + strand at 2490.790 kb on + strand at 2490.790 kb on + strand at 2490.790 kb on + strand at 2490.790 kb on + strand at 2490.790 kb on + strand at 2490.800 kb on + strand at 2490.800 kb on + strand at 2490.800 kb on + strand at 2490.801 kb on - strand at 2490.805 kb on + strand at 2490.807 kb on + strand at 2490.807 kb on + strand at 2490.808 kb on - strand at 2490.828 kb on + strand at 2490.831 kb on + strand at 2490.831 kb on + strand at 2490.834 kb on + strand at 2490.834 kb on + strand at 2490.835 kb on - strand at 2490.835 kb on - strand at 2490.835 kb on - strand at 2490.848 kb on - strand at 2490.884 kb on - strand at 2490.884 kb on - strand at 2490.888 kb on + strand at 2490.889 kb on - strand at 2491.043 kb on + strand, within CA264_10785 at 2491.045 kb on + strand, within CA264_10785 at 2491.054 kb on + strand, within CA264_10785 at 2491.055 kb on - strand, within CA264_10785 at 2491.060 kb on + strand, within CA264_10785 at 2491.061 kb on - strand, within CA264_10785 at 2491.066 kb on + strand, within CA264_10785 at 2491.067 kb on - strand, within CA264_10785 at 2491.067 kb on - strand, within CA264_10785 at 2491.125 kb on + strand, within CA264_10785 at 2491.126 kb on - strand, within CA264_10785 at 2491.162 kb on - strand, within CA264_10785 at 2491.218 kb on + strand, within CA264_10785 at 2491.219 kb on - strand, within CA264_10785 at 2491.219 kb on - strand, within CA264_10785 at 2491.219 kb on - strand, within CA264_10785 at 2491.221 kb on + strand, within CA264_10785 at 2491.222 kb on - strand, within CA264_10785 at 2491.222 kb on - strand, within CA264_10785 at 2491.222 kb on - strand, within CA264_10785 at 2491.223 kb on + strand, within CA264_10785 at 2491.223 kb on + strand, within CA264_10785 at 2491.223 kb on + strand, within CA264_10785 at 2491.223 kb on + strand, within CA264_10785 at 2491.223 kb on + strand, within CA264_10785 at 2491.224 kb on - strand, within CA264_10785 at 2491.224 kb on - strand, within CA264_10785 at 2491.230 kb on + strand, within CA264_10785 at 2491.231 kb on - strand, within CA264_10785 at 2491.385 kb on - strand, within CA264_10785 at 2491.385 kb on - strand, within CA264_10785 at 2491.388 kb on + strand, within CA264_10785 at 2491.388 kb on + strand, within CA264_10785 at 2491.389 kb on - strand, within CA264_10785 at 2491.389 kb on - strand, within CA264_10785 at 2491.389 kb on - strand, within CA264_10785 at 2491.459 kb on - strand, within CA264_10785 at 2491.461 kb on + strand, within CA264_10785 at 2491.461 kb on + strand, within CA264_10785 at 2491.462 kb on - strand, within CA264_10785 at 2491.462 kb on - strand, within CA264_10785 at 2491.462 kb on - strand, within CA264_10785 at 2491.467 kb on + strand, within CA264_10785 at 2491.518 kb on + strand, within CA264_10785 at 2491.518 kb on + strand, within CA264_10785 at 2491.519 kb on - strand, within CA264_10785 at 2491.584 kb on + strand, within CA264_10785 at 2491.588 kb on + strand, within CA264_10785 at 2491.588 kb on + strand, within CA264_10785 at 2491.588 kb on + strand, within CA264_10785 at 2491.589 kb on - strand, within CA264_10785 at 2491.589 kb on - strand, within CA264_10785 at 2491.589 kb on - strand, within CA264_10785 at 2491.589 kb on - strand, within CA264_10785 at 2491.590 kb on + strand, within CA264_10785 at 2491.590 kb on + strand, within CA264_10785 at 2491.626 kb on + strand, within CA264_10785 at 2491.627 kb on - strand, within CA264_10785 at 2491.673 kb on + strand, within CA264_10785 at 2491.679 kb on + strand, within CA264_10785 at 2491.680 kb on - strand, within CA264_10785 at 2491.680 kb on - strand, within CA264_10785 at 2491.683 kb on + strand, within CA264_10785 at 2491.684 kb on - strand, within CA264_10785 at 2491.982 kb on + strand, within CA264_10785 at 2492.085 kb on + strand, within CA264_10785 at 2492.086 kb on - strand, within CA264_10785 at 2492.091 kb on + strand, within CA264_10785 at 2492.092 kb on - strand, within CA264_10785 at 2492.092 kb on - strand, within CA264_10785 at 2492.097 kb on - strand, within CA264_10785 at 2492.245 kb on - strand, within CA264_10785 at 2492.252 kb on + strand, within CA264_10785 at 2492.252 kb on + strand, within CA264_10785 at 2492.594 kb on - strand, within CA264_10785 at 2492.676 kb on - strand, within CA264_10785 at 2492.676 kb on - strand, within CA264_10785 at 2492.690 kb on + strand, within CA264_10785 at 2492.691 kb on - strand, within CA264_10785 at 2492.764 kb on - strand, within CA264_10785 at 2492.810 kb on + strand, within CA264_10785 at 2492.810 kb on + strand, within CA264_10785 at 2492.810 kb on + strand, within CA264_10785 at 2492.811 kb on - strand, within CA264_10785 at 2492.811 kb on - strand, within CA264_10785 at 2493.050 kb on - strand, within CA264_10785 at 2493.088 kb on + strand at 2493.131 kb on - strand at 2493.160 kb on - strand at 2493.186 kb on + strand at 2493.186 kb on + strand at 2493.187 kb on - strand at 2493.192 kb on + strand at 2493.247 kb on + strand at 2493.248 kb on - strand at 2493.262 kb on + strand at 2493.262 kb on + strand at 2493.262 kb on + strand at 2493.263 kb on - strand at 2493.263 kb on - strand at 2493.266 kb on - strand at 2493.281 kb on - strand at 2493.282 kb on + strand at 2493.283 kb on - strand at 2493.283 kb on - strand at 2493.283 kb on - strand at 2493.283 kb on - strand at 2493.283 kb on - strand at 2493.327 kb on + strand at 2493.327 kb on + strand at 2493.328 kb on - strand at 2493.328 kb on - strand at 2493.328 kb on - strand at 2493.330 kb on - strand at 2493.406 kb on + strand at 2493.416 kb on - strand at 2493.422 kb on + strand at 2493.472 kb on + strand at 2493.472 kb on + strand at 2493.473 kb on - strand at 2493.487 kb on - strand at 2493.512 kb on - strand at 2493.513 kb on + strand at 2493.514 kb on - strand at 2493.514 kb on - strand at 2493.515 kb on + strand at 2493.515 kb on + strand at 2493.516 kb on - strand at 2493.516 kb on - strand at 2493.516 kb on - strand at 2493.516 kb on - strand at 2493.516 kb on - strand at 2493.536 kb on + strand at 2493.537 kb on - strand at 2493.537 kb on - strand at 2493.542 kb on + strand at 2493.555 kb on - strand at 2493.671 kb on + strand at 2493.672 kb on - strand at 2493.675 kb on + strand at 2493.676 kb on - strand at 2493.715 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,490,262 + -0.4 2,490,263 - -0.3 2,490,443 + CA264_10780 0.29 +0.4 2,490,443 + CA264_10780 0.29 -1.2 2,490,462 + CA264_10780 0.33 +0.2 2,490,462 + CA264_10780 0.33 -0.7 2,490,521 - CA264_10780 0.47 -0.2 2,490,651 + CA264_10780 0.77 -0.1 2,490,714 - +0.4 2,490,774 + -0.0 2,490,790 + -1.3 2,490,790 + -2.7 2,490,790 + -1.4 2,490,790 + -2.4 2,490,790 + -1.7 2,490,800 + -1.0 2,490,800 + -1.6 2,490,800 + -0.7 2,490,801 - -1.0 2,490,805 + -1.4 2,490,807 + -0.7 2,490,807 + -2.1 2,490,808 - -2.2 2,490,828 + -1.4 2,490,831 + -1.7 2,490,831 + -1.3 2,490,834 + +0.2 2,490,834 + -0.1 2,490,835 - -1.6 2,490,835 - -1.5 2,490,835 - -1.4 2,490,848 - -2.3 2,490,884 - -1.1 2,490,884 - -0.4 2,490,888 + -2.1 2,490,889 - -2.0 2,491,043 + CA264_10785 0.11 -1.4 2,491,045 + CA264_10785 0.12 -1.2 2,491,054 + CA264_10785 0.12 -1.5 2,491,055 - CA264_10785 0.12 -1.5 2,491,060 + CA264_10785 0.12 -1.9 2,491,061 - CA264_10785 0.12 -1.4 2,491,066 + CA264_10785 0.12 -0.7 2,491,067 - CA264_10785 0.12 -1.6 2,491,067 - CA264_10785 0.12 +0.1 2,491,125 + CA264_10785 0.15 -0.1 2,491,126 - CA264_10785 0.15 -0.7 2,491,162 - CA264_10785 0.16 -0.7 2,491,218 + CA264_10785 0.18 -1.4 2,491,219 - CA264_10785 0.18 -0.4 2,491,219 - CA264_10785 0.18 -0.8 2,491,219 - CA264_10785 0.18 +0.1 2,491,221 + CA264_10785 0.18 -1.7 2,491,222 - CA264_10785 0.18 -1.9 2,491,222 - CA264_10785 0.18 +0.9 2,491,222 - CA264_10785 0.18 -1.2 2,491,223 + CA264_10785 0.18 -1.3 2,491,223 + CA264_10785 0.18 -1.1 2,491,223 + CA264_10785 0.18 -0.9 2,491,223 + CA264_10785 0.18 -0.3 2,491,223 + CA264_10785 0.18 -2.1 2,491,224 - CA264_10785 0.18 -1.5 2,491,224 - CA264_10785 0.18 -0.9 2,491,230 + CA264_10785 0.19 -1.1 2,491,231 - CA264_10785 0.19 -0.7 2,491,385 - CA264_10785 0.25 -0.7 2,491,385 - CA264_10785 0.25 -1.9 2,491,388 + CA264_10785 0.25 -0.4 2,491,388 + CA264_10785 0.25 -2.7 2,491,389 - CA264_10785 0.25 +0.5 2,491,389 - CA264_10785 0.25 -1.7 2,491,389 - CA264_10785 0.25 -0.7 2,491,459 - CA264_10785 0.28 -0.9 2,491,461 + CA264_10785 0.28 -0.9 2,491,461 + CA264_10785 0.28 -0.7 2,491,462 - CA264_10785 0.28 -1.1 2,491,462 - CA264_10785 0.28 -1.8 2,491,462 - CA264_10785 0.28 -1.5 2,491,467 + CA264_10785 0.28 -0.1 2,491,518 + CA264_10785 0.30 -1.1 2,491,518 + CA264_10785 0.30 -1.9 2,491,519 - CA264_10785 0.30 -1.1 2,491,584 + CA264_10785 0.32 +0.1 2,491,588 + CA264_10785 0.32 -2.3 2,491,588 + CA264_10785 0.32 -1.3 2,491,588 + CA264_10785 0.32 -2.9 2,491,589 - CA264_10785 0.33 -2.3 2,491,589 - CA264_10785 0.33 -2.2 2,491,589 - CA264_10785 0.33 -0.6 2,491,589 - CA264_10785 0.33 -0.3 2,491,590 + CA264_10785 0.33 -1.3 2,491,590 + CA264_10785 0.33 -1.1 2,491,626 + CA264_10785 0.34 -1.4 2,491,627 - CA264_10785 0.34 -2.3 2,491,673 + CA264_10785 0.36 -1.7 2,491,679 + CA264_10785 0.36 -1.7 2,491,680 - CA264_10785 0.36 -1.7 2,491,680 - CA264_10785 0.36 -1.4 2,491,683 + CA264_10785 0.36 -1.1 2,491,684 - CA264_10785 0.36 -1.2 2,491,982 + CA264_10785 0.48 +0.9 2,492,085 + CA264_10785 0.52 -1.2 2,492,086 - CA264_10785 0.52 -0.9 2,492,091 + CA264_10785 0.52 +0.9 2,492,092 - CA264_10785 0.52 -1.4 2,492,092 - CA264_10785 0.52 -0.4 2,492,097 - CA264_10785 0.52 -1.1 2,492,245 - CA264_10785 0.58 -3.0 2,492,252 + CA264_10785 0.58 -1.7 2,492,252 + CA264_10785 0.58 -0.5 2,492,594 - CA264_10785 0.71 -0.2 2,492,676 - CA264_10785 0.74 -0.3 2,492,676 - CA264_10785 0.74 +0.3 2,492,690 + CA264_10785 0.75 -1.3 2,492,691 - CA264_10785 0.75 -0.2 2,492,764 - CA264_10785 0.78 -1.9 2,492,810 + CA264_10785 0.80 -0.1 2,492,810 + CA264_10785 0.80 -1.4 2,492,810 + CA264_10785 0.80 -0.1 2,492,811 - CA264_10785 0.80 -1.1 2,492,811 - CA264_10785 0.80 +0.9 2,493,050 - CA264_10785 0.89 -2.7 2,493,088 + -0.7 2,493,131 - +0.9 2,493,160 - -1.4 2,493,186 + -1.0 2,493,186 + -2.4 2,493,187 - -1.1 2,493,192 + -1.1 2,493,247 + -2.1 2,493,248 - -1.7 2,493,262 + -0.9 2,493,262 + -1.0 2,493,262 + -0.7 2,493,263 - -0.8 2,493,263 - -1.4 2,493,266 - -1.4 2,493,281 - -2.0 2,493,282 + -1.4 2,493,283 - -1.9 2,493,283 - +0.3 2,493,283 - -2.2 2,493,283 - -0.1 2,493,283 - -2.4 2,493,327 + -1.1 2,493,327 + -0.7 2,493,328 - -0.4 2,493,328 - -2.6 2,493,328 - -0.9 2,493,330 - -1.1 2,493,406 + -2.0 2,493,416 - -1.4 2,493,422 + -0.1 2,493,472 + -0.1 2,493,472 + -1.0 2,493,473 - -1.4 2,493,487 - +0.9 2,493,512 - -0.3 2,493,513 + +0.0 2,493,514 - +0.2 2,493,514 - +0.9 2,493,515 + +1.2 2,493,515 + -1.4 2,493,516 - +0.5 2,493,516 - -0.6 2,493,516 - -1.3 2,493,516 - +1.5 2,493,516 - -0.8 2,493,536 + -0.4 2,493,537 - -1.1 2,493,537 - -0.3 2,493,542 + -0.6 2,493,555 - -1.4 2,493,671 + -0.9 2,493,672 - +0.3 2,493,675 + -0.1 2,493,676 - -1.7 2,493,715 + -0.5
Or see this region's nucleotide sequence