Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08690 and CA264_08695 are separated by 144 nucleotides CA264_08695 and CA264_08700 are separated by 391 nucleotides
CA264_08690: CA264_08690 - dipeptide epimerase, at 2,016,789 to 2,017,802
_08690
CA264_08695: CA264_08695 - peptidase S13, at 2,017,947 to 2,019,260
_08695
CA264_08700: CA264_08700 - SusC/RagA family TonB-linked outer membrane protein, at 2,019,652 to 2,022,876
_08700
Position (kb)
2017
2018
2019
2020 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9
10
11 at 2016.995 kb on + strand, within CA264_08690 at 2016.996 kb on - strand, within CA264_08690 at 2017.007 kb on + strand, within CA264_08690 at 2017.106 kb on + strand, within CA264_08690 at 2017.148 kb on - strand, within CA264_08690 at 2017.197 kb on - strand, within CA264_08690 at 2017.292 kb on + strand, within CA264_08690 at 2017.292 kb on + strand, within CA264_08690 at 2017.313 kb on + strand, within CA264_08690 at 2017.392 kb on - strand, within CA264_08690 at 2017.433 kb on + strand, within CA264_08690 at 2017.433 kb on + strand, within CA264_08690 at 2017.433 kb on + strand, within CA264_08690 at 2017.433 kb on + strand, within CA264_08690 at 2017.433 kb on + strand, within CA264_08690 at 2017.434 kb on - strand, within CA264_08690 at 2017.434 kb on - strand, within CA264_08690 at 2017.434 kb on - strand, within CA264_08690 at 2017.507 kb on - strand, within CA264_08690 at 2017.542 kb on + strand, within CA264_08690 at 2017.542 kb on + strand, within CA264_08690 at 2017.543 kb on - strand, within CA264_08690 at 2017.543 kb on - strand, within CA264_08690 at 2017.658 kb on - strand, within CA264_08690 at 2017.755 kb on - strand at 2017.755 kb on - strand at 2017.760 kb on + strand at 2017.761 kb on - strand at 2017.761 kb on - strand at 2017.810 kb on + strand at 2017.810 kb on + strand at 2017.810 kb on + strand at 2017.811 kb on - strand at 2017.817 kb on - strand at 2017.829 kb on - strand at 2017.837 kb on - strand at 2017.837 kb on - strand at 2017.842 kb on - strand at 2017.842 kb on - strand at 2017.842 kb on - strand at 2017.859 kb on + strand at 2017.860 kb on - strand at 2017.929 kb on - strand at 2017.930 kb on + strand at 2017.943 kb on + strand at 2017.943 kb on + strand at 2017.943 kb on + strand at 2017.943 kb on + strand at 2017.944 kb on - strand at 2017.944 kb on - strand at 2017.949 kb on - strand at 2017.974 kb on - strand at 2018.017 kb on + strand at 2018.017 kb on + strand at 2018.018 kb on - strand at 2018.018 kb on - strand at 2018.024 kb on + strand at 2018.024 kb on + strand at 2018.071 kb on + strand at 2018.140 kb on + strand, within CA264_08695 at 2018.141 kb on - strand, within CA264_08695 at 2018.157 kb on - strand, within CA264_08695 at 2018.335 kb on + strand, within CA264_08695 at 2018.336 kb on - strand, within CA264_08695 at 2018.352 kb on + strand, within CA264_08695 at 2018.535 kb on + strand, within CA264_08695 at 2018.564 kb on + strand, within CA264_08695 at 2018.564 kb on + strand, within CA264_08695 at 2018.565 kb on - strand, within CA264_08695 at 2018.615 kb on + strand, within CA264_08695 at 2018.615 kb on + strand, within CA264_08695 at 2018.616 kb on - strand, within CA264_08695 at 2018.624 kb on + strand, within CA264_08695 at 2018.624 kb on + strand, within CA264_08695 at 2018.682 kb on + strand, within CA264_08695 at 2018.794 kb on + strand, within CA264_08695 at 2018.795 kb on - strand, within CA264_08695 at 2018.797 kb on + strand, within CA264_08695 at 2018.797 kb on + strand, within CA264_08695 at 2018.798 kb on - strand, within CA264_08695 at 2018.803 kb on + strand, within CA264_08695 at 2018.804 kb on - strand, within CA264_08695 at 2018.831 kb on - strand, within CA264_08695 at 2018.856 kb on + strand, within CA264_08695 at 2018.856 kb on + strand, within CA264_08695 at 2018.856 kb on + strand, within CA264_08695 at 2018.857 kb on - strand, within CA264_08695 at 2018.857 kb on - strand, within CA264_08695 at 2018.857 kb on - strand, within CA264_08695 at 2018.857 kb on - strand, within CA264_08695 at 2018.857 kb on - strand, within CA264_08695 at 2018.857 kb on - strand, within CA264_08695 at 2018.859 kb on - strand, within CA264_08695 at 2018.860 kb on + strand, within CA264_08695 at 2018.860 kb on + strand, within CA264_08695 at 2018.860 kb on + strand, within CA264_08695 at 2018.860 kb on + strand, within CA264_08695 at 2018.861 kb on - strand, within CA264_08695 at 2018.861 kb on - strand, within CA264_08695 at 2018.861 kb on - strand, within CA264_08695 at 2018.861 kb on - strand, within CA264_08695 at 2018.861 kb on - strand, within CA264_08695 at 2018.861 kb on - strand, within CA264_08695 at 2018.863 kb on + strand, within CA264_08695 at 2018.863 kb on + strand, within CA264_08695 at 2018.864 kb on - strand, within CA264_08695 at 2018.865 kb on + strand, within CA264_08695 at 2018.866 kb on - strand, within CA264_08695 at 2018.899 kb on + strand, within CA264_08695 at 2018.983 kb on + strand, within CA264_08695 at 2019.017 kb on + strand, within CA264_08695 at 2019.028 kb on + strand, within CA264_08695 at 2019.029 kb on - strand, within CA264_08695 at 2019.029 kb on - strand, within CA264_08695 at 2019.035 kb on + strand, within CA264_08695 at 2019.071 kb on + strand, within CA264_08695 at 2019.115 kb on + strand, within CA264_08695 at 2019.236 kb on + strand at 2019.237 kb on - strand at 2019.283 kb on + strand at 2019.284 kb on - strand at 2019.334 kb on + strand at 2019.334 kb on + strand at 2019.334 kb on + strand at 2019.335 kb on - strand at 2019.342 kb on + strand at 2019.354 kb on + strand at 2019.354 kb on + strand at 2019.355 kb on - strand at 2019.357 kb on - strand at 2019.357 kb on - strand at 2019.383 kb on + strand at 2019.384 kb on - strand at 2019.417 kb on - strand at 2019.439 kb on - strand at 2019.460 kb on + strand at 2019.464 kb on + strand at 2019.465 kb on - strand at 2019.553 kb on - strand at 2019.591 kb on - strand at 2019.600 kb on + strand at 2019.600 kb on + strand at 2019.600 kb on + strand at 2019.601 kb on - strand at 2019.603 kb on - strand at 2019.610 kb on + strand at 2019.644 kb on + strand at 2019.744 kb on - strand at 2019.801 kb on + strand at 2019.801 kb on + strand at 2019.802 kb on - strand at 2019.836 kb on - strand at 2019.936 kb on - strand at 2019.962 kb on + strand at 2019.971 kb on + strand at 2019.971 kb on + strand at 2020.035 kb on - strand, within CA264_08700 at 2020.035 kb on - strand, within CA264_08700 at 2020.055 kb on + strand, within CA264_08700 at 2020.055 kb on + strand, within CA264_08700 at 2020.216 kb on - strand, within CA264_08700
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,016,995 + CA264_08690 0.20 +0.5 2,016,996 - CA264_08690 0.20 -0.8 2,017,007 + CA264_08690 0.21 +0.1 2,017,106 + CA264_08690 0.31 +0.6 2,017,148 - CA264_08690 0.35 +0.3 2,017,197 - CA264_08690 0.40 -1.0 2,017,292 + CA264_08690 0.50 +0.1 2,017,292 + CA264_08690 0.50 -0.4 2,017,313 + CA264_08690 0.52 -0.1 2,017,392 - CA264_08690 0.59 +0.6 2,017,433 + CA264_08690 0.64 -0.2 2,017,433 + CA264_08690 0.64 +0.6 2,017,433 + CA264_08690 0.64 -0.3 2,017,433 + CA264_08690 0.64 -0.2 2,017,433 + CA264_08690 0.64 +2.4 2,017,434 - CA264_08690 0.64 +0.8 2,017,434 - CA264_08690 0.64 -0.4 2,017,434 - CA264_08690 0.64 +0.2 2,017,507 - CA264_08690 0.71 -0.3 2,017,542 + CA264_08690 0.74 -0.5 2,017,542 + CA264_08690 0.74 -0.8 2,017,543 - CA264_08690 0.74 +0.9 2,017,543 - CA264_08690 0.74 -0.1 2,017,658 - CA264_08690 0.86 +1.4 2,017,755 - -0.5 2,017,755 - -0.3 2,017,760 + -0.6 2,017,761 - -1.5 2,017,761 - -0.8 2,017,810 + -1.4 2,017,810 + -0.5 2,017,810 + -2.1 2,017,811 - +0.5 2,017,817 - +0.7 2,017,829 - -0.2 2,017,837 - +0.2 2,017,837 - +0.0 2,017,842 - +1.6 2,017,842 - -2.0 2,017,842 - +0.8 2,017,859 + -0.5 2,017,860 - -0.2 2,017,929 - +1.8 2,017,930 + +1.4 2,017,943 + +1.6 2,017,943 + -0.8 2,017,943 + +0.1 2,017,943 + +2.4 2,017,944 - +0.7 2,017,944 - +0.0 2,017,949 - -0.1 2,017,974 - -0.5 2,018,017 + +1.1 2,018,017 + -0.2 2,018,018 - +0.1 2,018,018 - -1.2 2,018,024 + +0.6 2,018,024 + +1.4 2,018,071 + +0.8 2,018,140 + CA264_08695 0.15 +0.6 2,018,141 - CA264_08695 0.15 -2.0 2,018,157 - CA264_08695 0.16 +0.2 2,018,335 + CA264_08695 0.30 -0.3 2,018,336 - CA264_08695 0.30 +0.4 2,018,352 + CA264_08695 0.31 -0.5 2,018,535 + CA264_08695 0.45 -0.1 2,018,564 + CA264_08695 0.47 -1.0 2,018,564 + CA264_08695 0.47 -0.1 2,018,565 - CA264_08695 0.47 +0.4 2,018,615 + CA264_08695 0.51 -0.2 2,018,615 + CA264_08695 0.51 +1.4 2,018,616 - CA264_08695 0.51 +0.2 2,018,624 + CA264_08695 0.52 -1.8 2,018,624 + CA264_08695 0.52 +1.1 2,018,682 + CA264_08695 0.56 +1.0 2,018,794 + CA264_08695 0.64 -0.3 2,018,795 - CA264_08695 0.65 +0.3 2,018,797 + CA264_08695 0.65 +0.2 2,018,797 + CA264_08695 0.65 +0.1 2,018,798 - CA264_08695 0.65 -0.5 2,018,803 + CA264_08695 0.65 -0.4 2,018,804 - CA264_08695 0.65 +2.4 2,018,831 - CA264_08695 0.67 -0.3 2,018,856 + CA264_08695 0.69 -0.9 2,018,856 + CA264_08695 0.69 +0.2 2,018,856 + CA264_08695 0.69 -0.4 2,018,857 - CA264_08695 0.69 -0.6 2,018,857 - CA264_08695 0.69 +0.8 2,018,857 - CA264_08695 0.69 -2.4 2,018,857 - CA264_08695 0.69 +11.2 2,018,857 - CA264_08695 0.69 +2.4 2,018,857 - CA264_08695 0.69 -1.6 2,018,859 - CA264_08695 0.69 +0.8 2,018,860 + CA264_08695 0.69 -0.6 2,018,860 + CA264_08695 0.69 +0.1 2,018,860 + CA264_08695 0.69 +0.2 2,018,860 + CA264_08695 0.69 -0.2 2,018,861 - CA264_08695 0.70 +0.8 2,018,861 - CA264_08695 0.70 +1.3 2,018,861 - CA264_08695 0.70 +2.8 2,018,861 - CA264_08695 0.70 -0.2 2,018,861 - CA264_08695 0.70 +1.3 2,018,861 - CA264_08695 0.70 -0.2 2,018,863 + CA264_08695 0.70 -1.0 2,018,863 + CA264_08695 0.70 -0.2 2,018,864 - CA264_08695 0.70 -0.2 2,018,865 + CA264_08695 0.70 +1.6 2,018,866 - CA264_08695 0.70 +0.2 2,018,899 + CA264_08695 0.72 +0.1 2,018,983 + CA264_08695 0.79 -0.3 2,019,017 + CA264_08695 0.81 -0.4 2,019,028 + CA264_08695 0.82 -0.0 2,019,029 - CA264_08695 0.82 -0.2 2,019,029 - CA264_08695 0.82 -0.1 2,019,035 + CA264_08695 0.83 +1.6 2,019,071 + CA264_08695 0.86 -0.6 2,019,115 + CA264_08695 0.89 -1.7 2,019,236 + -0.4 2,019,237 - -1.1 2,019,283 + +0.7 2,019,284 - -0.2 2,019,334 + +1.2 2,019,334 + -1.4 2,019,334 + -0.8 2,019,335 - -0.8 2,019,342 + -1.8 2,019,354 + +0.8 2,019,354 + -2.1 2,019,355 - -0.4 2,019,357 - +0.2 2,019,357 - -1.5 2,019,383 + -0.9 2,019,384 - -0.8 2,019,417 - -1.4 2,019,439 - -0.5 2,019,460 + +1.0 2,019,464 + -2.0 2,019,465 - -0.2 2,019,553 - +0.9 2,019,591 - +0.3 2,019,600 + +0.4 2,019,600 + -1.1 2,019,600 + +0.0 2,019,601 - -0.9 2,019,603 - +0.6 2,019,610 + -0.2 2,019,644 + +0.5 2,019,744 - +0.6 2,019,801 + -1.3 2,019,801 + +1.1 2,019,802 - -0.6 2,019,836 - +0.5 2,019,936 - +0.2 2,019,962 + -0.4 2,019,971 + +1.2 2,019,971 + +0.0 2,020,035 - CA264_08700 0.12 -0.8 2,020,035 - CA264_08700 0.12 +0.4 2,020,055 + CA264_08700 0.12 -0.1 2,020,055 + CA264_08700 0.12 -0.8 2,020,216 - CA264_08700 0.17 -0.6
Or see this region's nucleotide sequence