Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04360 and CA264_04365 are separated by 119 nucleotides CA264_04365 and CA264_04370 are separated by 108 nucleotides
CA264_04360: CA264_04360 - transketolase, at 1,008,721 to 1,011,129
_04360
CA264_04365: CA264_04365 - hypothetical protein, at 1,011,249 to 1,011,782
_04365
CA264_04370: CA264_04370 - acyl transferase, at 1,011,891 to 1,012,856
_04370
Position (kb)
1011
1012 Strain fitness (log2 ratio)
-2
-1
0
1 at 1011.117 kb on + strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.191 kb on + strand at 1011.204 kb on + strand at 1011.204 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.223 kb on - strand at 1011.244 kb on + strand at 1011.245 kb on - strand at 1011.246 kb on + strand at 1011.247 kb on - strand at 1011.250 kb on + strand at 1011.320 kb on + strand, within CA264_04365 at 1011.321 kb on - strand, within CA264_04365 at 1011.468 kb on - strand, within CA264_04365 at 1011.468 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.507 kb on - strand, within CA264_04365 at 1011.670 kb on + strand, within CA264_04365 at 1011.670 kb on + strand, within CA264_04365 at 1011.692 kb on + strand, within CA264_04365 at 1011.712 kb on + strand, within CA264_04365 at 1011.713 kb on - strand, within CA264_04365 at 1011.713 kb on - strand, within CA264_04365 at 1011.754 kb on - strand at 1011.777 kb on + strand at 1011.785 kb on - strand at 1011.785 kb on - strand at 1012.069 kb on + strand, within CA264_04370 at 1012.174 kb on + strand, within CA264_04370 at 1012.219 kb on - strand, within CA264_04370 at 1012.326 kb on + strand, within CA264_04370 at 1012.327 kb on - strand, within CA264_04370 at 1012.555 kb on + strand, within CA264_04370 at 1012.580 kb on + strand, within CA264_04370 at 1012.580 kb on + strand, within CA264_04370 at 1012.581 kb on - strand, within CA264_04370 at 1012.581 kb on - strand, within CA264_04370 at 1012.644 kb on - strand, within CA264_04370 at 1012.720 kb on + strand, within CA264_04370 at 1012.721 kb on - strand, within CA264_04370
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 1,011,117 + +1.1 1,011,125 - -1.0 1,011,125 - +0.3 1,011,125 - +0.1 1,011,125 - -0.2 1,011,191 + -0.3 1,011,204 + -2.7 1,011,204 + +1.1 1,011,222 + -1.9 1,011,222 + +0.3 1,011,222 + -0.9 1,011,222 + -1.7 1,011,223 - -0.5 1,011,244 + +0.9 1,011,245 - +0.3 1,011,246 + -0.5 1,011,247 - -1.7 1,011,250 + -0.3 1,011,320 + CA264_04365 0.13 -2.1 1,011,321 - CA264_04365 0.13 -1.0 1,011,468 - CA264_04365 0.41 -1.1 1,011,468 - CA264_04365 0.41 -1.2 1,011,505 - CA264_04365 0.48 -1.8 1,011,505 - CA264_04365 0.48 -1.0 1,011,505 - CA264_04365 0.48 -0.3 1,011,507 - CA264_04365 0.48 -0.7 1,011,670 + CA264_04365 0.79 -1.7 1,011,670 + CA264_04365 0.79 -1.7 1,011,692 + CA264_04365 0.83 -1.5 1,011,712 + CA264_04365 0.87 -1.7 1,011,713 - CA264_04365 0.87 -2.3 1,011,713 - CA264_04365 0.87 +0.2 1,011,754 - -2.7 1,011,777 + -1.3 1,011,785 - -2.3 1,011,785 - -2.1 1,012,069 + CA264_04370 0.18 +0.5 1,012,174 + CA264_04370 0.29 -0.2 1,012,219 - CA264_04370 0.34 -0.6 1,012,326 + CA264_04370 0.45 +0.0 1,012,327 - CA264_04370 0.45 -0.4 1,012,555 + CA264_04370 0.69 -0.1 1,012,580 + CA264_04370 0.71 +0.2 1,012,580 + CA264_04370 0.71 +0.2 1,012,581 - CA264_04370 0.71 -0.3 1,012,581 - CA264_04370 0.71 -0.1 1,012,644 - CA264_04370 0.78 +1.4 1,012,720 + CA264_04370 0.86 +0.3 1,012,721 - CA264_04370 0.86 -0.2
Or see this region's nucleotide sequence