Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03525 and ABID97_RS03530 are separated by 27 nucleotides ABID97_RS03530 and ABID97_RS03535 are separated by 709 nucleotides
ABID97_RS03525: ABID97_RS03525 - ABC transporter substrate-binding protein, at 718,421 to 719,626
_RS03525
ABID97_RS03530: ABID97_RS03530 - ABC transporter permease, at 719,654 to 721,576
_RS03530
ABID97_RS03535: ABID97_RS03535 - ABC transporter ATP-binding protein, at 722,286 to 723,089
_RS03535
Position (kb) 719
720
721
722 Strain fitness (log2 ratio) -1
0
1
2
3 at 718.838 kb on + strand, within ABID97_RS03525 at 718.838 kb on + strand, within ABID97_RS03525 at 718.838 kb on + strand, within ABID97_RS03525 at 718.865 kb on + strand, within ABID97_RS03525 at 718.865 kb on + strand, within ABID97_RS03525 at 718.865 kb on + strand, within ABID97_RS03525 at 718.865 kb on + strand, within ABID97_RS03525 at 718.865 kb on + strand, within ABID97_RS03525 at 718.866 kb on - strand, within ABID97_RS03525 at 718.866 kb on - strand, within ABID97_RS03525 at 718.941 kb on - strand, within ABID97_RS03525 at 718.941 kb on - strand, within ABID97_RS03525 at 718.941 kb on - strand, within ABID97_RS03525 at 718.941 kb on - strand, within ABID97_RS03525 at 718.947 kb on - strand, within ABID97_RS03525 at 719.204 kb on + strand, within ABID97_RS03525 at 719.265 kb on - strand, within ABID97_RS03525 at 719.306 kb on + strand, within ABID97_RS03525 at 719.319 kb on - strand, within ABID97_RS03525 at 719.319 kb on - strand, within ABID97_RS03525 at 719.354 kb on + strand, within ABID97_RS03525 at 719.555 kb on + strand at 719.555 kb on + strand at 719.561 kb on + strand at 719.561 kb on + strand at 719.562 kb on - strand at 719.797 kb on + strand at 719.801 kb on + strand at 719.924 kb on + strand, within ABID97_RS03530 at 719.924 kb on + strand, within ABID97_RS03530 at 719.925 kb on - strand, within ABID97_RS03530 at 719.996 kb on + strand, within ABID97_RS03530 at 720.083 kb on + strand, within ABID97_RS03530 at 720.084 kb on - strand, within ABID97_RS03530 at 720.614 kb on + strand, within ABID97_RS03530 at 720.615 kb on - strand, within ABID97_RS03530 at 720.900 kb on - strand, within ABID97_RS03530 at 720.932 kb on + strand, within ABID97_RS03530 at 720.932 kb on + strand, within ABID97_RS03530 at 720.983 kb on + strand, within ABID97_RS03530 at 721.064 kb on + strand, within ABID97_RS03530 at 721.065 kb on - strand, within ABID97_RS03530 at 721.068 kb on - strand, within ABID97_RS03530 at 721.263 kb on - strand, within ABID97_RS03530 at 721.428 kb on - strand at 722.302 kb on + strand at 722.302 kb on + strand at 722.311 kb on + strand at 722.311 kb on + strand at 722.312 kb on - strand at 722.312 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 718,838 + ABID97_RS03525 0.35 +1.4 718,838 + ABID97_RS03525 0.35 +1.3 718,838 + ABID97_RS03525 0.35 +1.8 718,865 + ABID97_RS03525 0.37 +1.7 718,865 + ABID97_RS03525 0.37 +0.7 718,865 + ABID97_RS03525 0.37 +1.4 718,865 + ABID97_RS03525 0.37 +1.1 718,865 + ABID97_RS03525 0.37 +1.1 718,866 - ABID97_RS03525 0.37 +2.0 718,866 - ABID97_RS03525 0.37 +2.5 718,941 - ABID97_RS03525 0.43 +1.5 718,941 - ABID97_RS03525 0.43 +1.8 718,941 - ABID97_RS03525 0.43 +1.9 718,941 - ABID97_RS03525 0.43 +2.0 718,947 - ABID97_RS03525 0.44 +2.0 719,204 + ABID97_RS03525 0.65 +1.4 719,265 - ABID97_RS03525 0.70 +1.3 719,306 + ABID97_RS03525 0.73 +2.1 719,319 - ABID97_RS03525 0.74 +2.2 719,319 - ABID97_RS03525 0.74 +1.6 719,354 + ABID97_RS03525 0.77 +2.0 719,555 + +2.0 719,555 + +1.8 719,561 + +3.0 719,561 + +1.3 719,562 - +1.5 719,797 + +2.3 719,801 + +2.7 719,924 + ABID97_RS03530 0.14 +1.1 719,924 + ABID97_RS03530 0.14 +1.3 719,925 - ABID97_RS03530 0.14 +1.6 719,996 + ABID97_RS03530 0.18 -0.4 720,083 + ABID97_RS03530 0.22 +2.2 720,084 - ABID97_RS03530 0.22 +1.7 720,614 + ABID97_RS03530 0.50 +1.6 720,615 - ABID97_RS03530 0.50 +0.7 720,900 - ABID97_RS03530 0.65 +1.8 720,932 + ABID97_RS03530 0.66 +2.1 720,932 + ABID97_RS03530 0.66 +0.9 720,983 + ABID97_RS03530 0.69 +1.7 721,064 + ABID97_RS03530 0.73 +1.6 721,065 - ABID97_RS03530 0.73 +3.3 721,068 - ABID97_RS03530 0.74 +1.2 721,263 - ABID97_RS03530 0.84 +1.8 721,428 - +1.6 722,302 + +1.1 722,302 + +1.8 722,311 + +1.9 722,311 + +1.5 722,312 - +2.2 722,312 - +2.0
Or see this region's nucleotide sequence