Strain Fitness in Escherichia coli BW25113 around b2755

Experiment: D-Galacturonic Acid (C) MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galacturonic Acid (C) MOPS
2,875,902	-				+0.8
2,875,962	-				+0.5
2,875,962	-				+0.8
2,876,366	-				+0.6
2,876,677	-	ygbF	b2754	0.30	+0.5
2,876,788	-	ygbF	b2754	0.69	-1.8
2,876,788	-	ygbF	b2754	0.69	-0.2
2,876,789	-	ygbF	b2754	0.69	+0.4
2,876,948	-				+0.1
2,877,084	-	ygbT	b2755	0.23	-1.5
2,877,130	-	ygbT	b2755	0.28	+0.2
2,877,141	+	ygbT	b2755	0.29	+0.8
2,877,141	+	ygbT	b2755	0.29	+0.6
2,877,141	+	ygbT	b2755	0.29	-0.8
2,877,176	-	ygbT	b2755	0.33	+0.8
2,877,307	+	ygbT	b2755	0.47	-0.5
2,877,315	-	ygbT	b2755	0.48	-2.0
2,877,336	+	ygbT	b2755	0.50	-0.2
2,877,497	+	ygbT	b2755	0.68	-0.5
2,877,596	+	ygbT	b2755	0.78	-0.5
2,877,596	+	ygbT	b2755	0.78	-0.6
2,877,602	-	ygbT	b2755	0.79	-0.5
2,877,638	+	ygbT	b2755	0.83	-0.2
2,877,662	+	ygbT	b2755	0.86	-0.5
2,877,685	-	ygbT	b2755	0.88	+0.2
2,877,685	-	ygbT	b2755	0.88	-0.2
2,877,690	-	ygbT	b2755	0.89	-0.2
2,877,701	-	ygbT	b2755	0.90	-1.6
2,877,857	+				-0.6
2,877,865	-				+0.0
2,877,909	+	ygcH	b2756	0.17	-0.7
2,877,986	-	ygcH	b2756	0.29	-1.5
2,877,986	-	ygcH	b2756	0.29	+0.1
2,877,992	+	ygcH	b2756	0.30	+0.4
2,877,997	+	ygcH	b2756	0.31	+3.1
2,878,001	-	ygcH	b2756	0.32	-2.0
2,878,001	-	ygcH	b2756	0.32	-0.3
2,878,022	+	ygcH	b2756	0.35	+0.8
2,878,022	+	ygcH	b2756	0.35	-0.2
2,878,044	-	ygcH	b2756	0.39	+0.2
2,878,054	-	ygcH	b2756	0.41	-0.3
2,878,096	-	ygcH	b2756	0.48	-0.1
2,878,100	-	ygcH	b2756	0.48	-0.1
2,878,106	-	ygcH	b2756	0.49	+0.6
2,878,156	-	ygcH	b2756	0.58	-0.0
2,878,156	-	ygcH	b2756	0.58	+0.6
2,878,178	-	ygcH	b2756	0.61	+1.2
2,878,183	+	ygcH	b2756	0.62	+1.0
2,878,233	+	ygcH	b2756	0.70	-1.5
2,878,233	+	ygcH	b2756	0.70	+1.0
2,878,265	+	ygcH	b2756	0.76	-0.4
2,878,266	-	ygcH	b2756	0.76	-0.2
2,878,271	-	ygcH	b2756	0.77	-0.2
2,878,274	-	ygcH	b2756	0.77	+0.6
2,878,312	+	ygcH	b2756	0.84	+0.7
2,878,321	-	ygcH	b2756	0.85	-0.4
2,878,377	-				+0.9
2,878,379	-				+0.4
2,878,394	-				-0.6
2,878,406	-				+0.8
2,878,415	-				-0.2
2,878,416	-				+0.8
2,878,416	-				-0.5
2,878,421	-				-0.4
2,878,421	-				+0.8
2,878,426	-				+0.8
2,878,426	-				+0.1
2,878,426	-				-0.6
2,878,426	-				-0.3
2,878,512	-	b2757	b2757	0.17	+0.3
2,878,512	-	b2757	b2757	0.17	-0.2
2,878,516	-	b2757	b2757	0.18	-0.2
2,878,518	-	b2757	b2757	0.18	+1.8
2,878,518	-	b2757	b2757	0.18	-0.8
2,878,533	-	b2757	b2757	0.20	+0.2
2,878,586	-	b2757	b2757	0.28	+0.5
2,878,589	-	b2757	b2757	0.29	+0.3
2,878,604	-	b2757	b2757	0.31	-0.1
2,878,622	+	b2757	b2757	0.33	+0.3
2,878,625	-	b2757	b2757	0.34	-0.3
2,878,630	+	b2757	b2757	0.35	+0.4
2,878,640	+	b2757	b2757	0.36	+0.2
2,878,640	+	b2757	b2757	0.36	+0.8
2,878,641	-	b2757	b2757	0.36	-2.2
2,878,646	-	b2757	b2757	0.37	+0.2
2,878,648	-	b2757	b2757	0.37	+1.0
2,878,648	-	b2757	b2757	0.37	-1.2
2,878,648	-	b2757	b2757	0.37	-0.3
2,878,648	-	b2757	b2757	0.37	+0.3
2,878,648	-	b2757	b2757	0.37	+0.4
2,878,648	-	b2757	b2757	0.37	-0.3
2,878,651	-	b2757	b2757	0.38	-1.0
2,878,685	+	b2757	b2757	0.43	+0.1
2,878,694	-	b2757	b2757	0.44	-0.2
2,878,701	+	b2757	b2757	0.45	+1.0
2,878,707	-	b2757	b2757	0.46	-0.7
2,878,711	-	b2757	b2757	0.47	-0.5
2,878,715	-	b2757	b2757	0.47	+0.2
2,878,716	-	b2757	b2757	0.47	+0.2
2,878,716	-	b2757	b2757	0.47	+0.4
2,878,716	-	b2757	b2757	0.47	+0.6
2,878,742	-	b2757	b2757	0.51	+0.5