Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19810 and CA264_19815 are separated by 1 nucleotides CA264_19815 and CA264_19820 are separated by 193 nucleotides
CA264_19810: CA264_19810 - epoxyqueuosine reductase, at 4,572,478 to 4,573,419
_19810
CA264_19815: CA264_19815 - hypothetical protein, at 4,573,421 to 4,573,621
_19815
CA264_19820: CA264_19820 - dessication-associated protein, at 4,573,815 to 4,574,618
_19820
Position (kb) 4573
4574 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4572.754 kb on + strand, within CA264_19810 at 4572.807 kb on + strand, within CA264_19810 at 4572.845 kb on + strand, within CA264_19810 at 4572.854 kb on + strand, within CA264_19810 at 4572.854 kb on + strand, within CA264_19810 at 4572.974 kb on - strand, within CA264_19810 at 4572.974 kb on - strand, within CA264_19810 at 4572.995 kb on + strand, within CA264_19810 at 4572.996 kb on - strand, within CA264_19810 at 4573.026 kb on - strand, within CA264_19810 at 4573.100 kb on + strand, within CA264_19810 at 4573.417 kb on + strand at 4573.417 kb on + strand at 4573.418 kb on - strand at 4573.430 kb on + strand at 4573.430 kb on + strand at 4573.431 kb on - strand at 4573.431 kb on - strand at 4573.495 kb on - strand, within CA264_19815 at 4573.495 kb on - strand, within CA264_19815 at 4573.518 kb on - strand, within CA264_19815 at 4573.518 kb on - strand, within CA264_19815 at 4573.541 kb on - strand, within CA264_19815 at 4573.611 kb on + strand at 4573.630 kb on + strand at 4573.630 kb on + strand at 4573.631 kb on - strand at 4573.631 kb on - strand at 4573.631 kb on - strand at 4573.638 kb on - strand at 4573.638 kb on - strand at 4573.668 kb on - strand at 4573.711 kb on - strand at 4573.777 kb on - strand at 4574.094 kb on + strand, within CA264_19820 at 4574.134 kb on + strand, within CA264_19820 at 4574.237 kb on + strand, within CA264_19820 at 4574.238 kb on - strand, within CA264_19820 at 4574.270 kb on + strand, within CA264_19820 at 4574.387 kb on + strand, within CA264_19820 at 4574.387 kb on + strand, within CA264_19820 at 4574.387 kb on + strand, within CA264_19820 at 4574.387 kb on + strand, within CA264_19820 at 4574.389 kb on + strand, within CA264_19820 at 4574.466 kb on - strand, within CA264_19820 at 4574.466 kb on - strand, within CA264_19820 at 4574.505 kb on + strand, within CA264_19820 at 4574.568 kb on + strand at 4574.569 kb on - strand at 4574.581 kb on - strand at 4574.611 kb on - strand at 4574.612 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 4,572,754 + CA264_19810 0.29 -3.1 4,572,807 + CA264_19810 0.35 -0.2 4,572,845 + CA264_19810 0.39 -1.4 4,572,854 + CA264_19810 0.40 -0.4 4,572,854 + CA264_19810 0.40 -0.4 4,572,974 - CA264_19810 0.53 -2.9 4,572,974 - CA264_19810 0.53 -1.6 4,572,995 + CA264_19810 0.55 -0.9 4,572,996 - CA264_19810 0.55 -0.4 4,573,026 - CA264_19810 0.58 -1.9 4,573,100 + CA264_19810 0.66 -0.9 4,573,417 + -0.7 4,573,417 + -0.6 4,573,418 - -2.4 4,573,430 + -0.6 4,573,430 + -0.5 4,573,431 - -3.0 4,573,431 - -4.6 4,573,495 - CA264_19815 0.37 -2.9 4,573,495 - CA264_19815 0.37 -1.5 4,573,518 - CA264_19815 0.48 -2.3 4,573,518 - CA264_19815 0.48 -4.5 4,573,541 - CA264_19815 0.60 -2.2 4,573,611 + -2.8 4,573,630 + +0.1 4,573,630 + +0.3 4,573,631 - -3.4 4,573,631 - +0.1 4,573,631 - -2.0 4,573,638 - -3.4 4,573,638 - +0.1 4,573,668 - -2.4 4,573,711 - -2.7 4,573,777 - -2.2 4,574,094 + CA264_19820 0.35 +0.4 4,574,134 + CA264_19820 0.40 -0.4 4,574,237 + CA264_19820 0.52 +0.1 4,574,238 - CA264_19820 0.53 -0.3 4,574,270 + CA264_19820 0.57 +0.1 4,574,387 + CA264_19820 0.71 -2.2 4,574,387 + CA264_19820 0.71 -1.3 4,574,387 + CA264_19820 0.71 -1.2 4,574,387 + CA264_19820 0.71 -1.4 4,574,389 + CA264_19820 0.71 -0.3 4,574,466 - CA264_19820 0.81 -0.6 4,574,466 - CA264_19820 0.81 +0.1 4,574,505 + CA264_19820 0.86 -0.3 4,574,568 + -1.9 4,574,569 - -0.2 4,574,581 - -1.9 4,574,611 - -0.9 4,574,612 + -0.1
Or see this region's nucleotide sequence