Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19225 and CA264_19230 overlap by 4 nucleotides CA264_19230 and CA264_19235 are separated by 141 nucleotides CA264_19235 and CA264_19240 are separated by 52 nucleotides CA264_19240 and CA264_19245 are separated by 80 nucleotides
CA264_19225: CA264_19225 - guanylate kinase, at 4,465,315 to 4,465,899
_19225
CA264_19230: CA264_19230 - nicotinate-nicotinamide nucleotide adenylyltransferase, at 4,465,896 to 4,466,468
_19230
CA264_19235: CA264_19235 - ribosome-recycling factor, at 4,466,610 to 4,467,173
_19235
CA264_19240: CA264_19240 - UMP kinase, at 4,467,226 to 4,468,002
_19240
CA264_19245: CA264_19245 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 4,468,083 to 4,468,583
_19245
Position (kb)
4466
4467
4468 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4466.493 kb on + strand at 4466.515 kb on + strand at 4466.516 kb on - strand at 4466.516 kb on - strand at 4466.521 kb on - strand at 4466.579 kb on + strand at 4466.579 kb on + strand at 4466.603 kb on + strand at 4466.611 kb on + strand at 4467.185 kb on + strand at 4467.186 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.173 kb on - strand, within CA264_19245 at 4468.173 kb on - strand, within CA264_19245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 4,466,493 + +2.0 4,466,515 + +1.1 4,466,516 - +0.1 4,466,516 - -0.2 4,466,521 - -1.5 4,466,579 + -0.3 4,466,579 + -1.8 4,466,603 + -0.1 4,466,611 + -0.7 4,467,185 + +0.4 4,467,186 - -0.2 4,468,081 - +1.7 4,468,081 - +1.4 4,468,081 - +0.1 4,468,081 - +1.0 4,468,081 - +0.9 4,468,081 - -0.6 4,468,173 - CA264_19245 0.18 -0.5 4,468,173 - CA264_19245 0.18 +0.2
Or see this region's nucleotide sequence