Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17385 and CA264_17390 are separated by 239 nucleotides CA264_17390 and CA264_17395 are separated by 629 nucleotides
CA264_17385: CA264_17385 - ABC transporter ATP-binding protein, at 4,052,762 to 4,054,612
_17385
CA264_17390: CA264_17390 - hypothetical protein, at 4,054,852 to 4,055,310
_17390
CA264_17395: CA264_17395 - glutathione synthetase, at 4,055,940 to 4,056,989
_17395
Position (kb)
4054
4055
4056 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4053.918 kb on - strand, within CA264_17385 at 4053.921 kb on + strand, within CA264_17385 at 4053.922 kb on - strand, within CA264_17385 at 4053.976 kb on - strand, within CA264_17385 at 4053.988 kb on + strand, within CA264_17385 at 4054.016 kb on + strand, within CA264_17385 at 4054.036 kb on + strand, within CA264_17385 at 4054.036 kb on + strand, within CA264_17385 at 4054.037 kb on - strand, within CA264_17385 at 4054.040 kb on + strand, within CA264_17385 at 4054.040 kb on + strand, within CA264_17385 at 4054.040 kb on + strand, within CA264_17385 at 4054.041 kb on - strand, within CA264_17385 at 4054.041 kb on - strand, within CA264_17385 at 4054.183 kb on + strand, within CA264_17385 at 4054.357 kb on + strand, within CA264_17385 at 4054.376 kb on + strand, within CA264_17385 at 4054.377 kb on - strand, within CA264_17385 at 4054.377 kb on - strand, within CA264_17385 at 4054.406 kb on - strand, within CA264_17385 at 4054.406 kb on - strand, within CA264_17385 at 4054.423 kb on - strand, within CA264_17385 at 4054.613 kb on - strand at 4054.631 kb on - strand at 4054.646 kb on + strand at 4054.646 kb on + strand at 4054.646 kb on + strand at 4054.646 kb on + strand at 4054.647 kb on - strand at 4054.650 kb on + strand at 4054.650 kb on + strand at 4054.651 kb on - strand at 4054.651 kb on - strand at 4054.653 kb on - strand at 4054.653 kb on - strand at 4054.687 kb on - strand at 4054.716 kb on + strand at 4054.733 kb on + strand at 4054.813 kb on - strand at 4054.833 kb on + strand at 4054.836 kb on - strand at 4054.838 kb on + strand at 4054.844 kb on - strand at 4054.844 kb on - strand at 4054.850 kb on - strand at 4054.850 kb on - strand at 4054.850 kb on - strand at 4054.850 kb on - strand at 4054.851 kb on + strand at 4054.851 kb on + strand at 4054.861 kb on + strand at 4054.862 kb on - strand at 4054.871 kb on - strand at 4054.904 kb on + strand, within CA264_17390 at 4054.921 kb on + strand, within CA264_17390 at 4054.929 kb on - strand, within CA264_17390 at 4054.943 kb on + strand, within CA264_17390 at 4054.945 kb on + strand, within CA264_17390 at 4055.262 kb on - strand, within CA264_17390 at 4055.306 kb on + strand at 4055.307 kb on - strand at 4055.307 kb on - strand at 4055.337 kb on + strand at 4055.337 kb on + strand at 4055.338 kb on - strand at 4055.341 kb on + strand at 4055.342 kb on - strand at 4055.347 kb on - strand at 4055.364 kb on + strand at 4055.365 kb on - strand at 4055.604 kb on + strand at 4055.835 kb on + strand at 4055.918 kb on - strand at 4055.925 kb on + strand at 4055.967 kb on + strand at 4055.968 kb on - strand at 4055.992 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 4,053,918 - CA264_17385 0.62 +2.1 4,053,921 + CA264_17385 0.63 -0.9 4,053,922 - CA264_17385 0.63 -0.8 4,053,976 - CA264_17385 0.66 -0.2 4,053,988 + CA264_17385 0.66 -0.5 4,054,016 + CA264_17385 0.68 -0.8 4,054,036 + CA264_17385 0.69 -1.4 4,054,036 + CA264_17385 0.69 +0.5 4,054,037 - CA264_17385 0.69 -1.1 4,054,040 + CA264_17385 0.69 +0.4 4,054,040 + CA264_17385 0.69 -0.7 4,054,040 + CA264_17385 0.69 -0.4 4,054,041 - CA264_17385 0.69 -1.5 4,054,041 - CA264_17385 0.69 +0.5 4,054,183 + CA264_17385 0.77 -1.2 4,054,357 + CA264_17385 0.86 +1.1 4,054,376 + CA264_17385 0.87 -0.9 4,054,377 - CA264_17385 0.87 +0.9 4,054,377 - CA264_17385 0.87 -0.3 4,054,406 - CA264_17385 0.89 +0.8 4,054,406 - CA264_17385 0.89 +1.1 4,054,423 - CA264_17385 0.90 -0.7 4,054,613 - -1.3 4,054,631 - -2.1 4,054,646 + -1.5 4,054,646 + -0.3 4,054,646 + -0.8 4,054,646 + -0.1 4,054,647 - -0.1 4,054,650 + -1.2 4,054,650 + -0.1 4,054,651 - -1.7 4,054,651 - -0.7 4,054,653 - -0.2 4,054,653 - +0.1 4,054,687 - -0.3 4,054,716 + -0.8 4,054,733 + -2.3 4,054,813 - -1.2 4,054,833 + -0.4 4,054,836 - -0.7 4,054,838 + +0.7 4,054,844 - +1.1 4,054,844 - -1.7 4,054,850 - -0.3 4,054,850 - -0.2 4,054,850 - +0.8 4,054,850 - -0.9 4,054,851 + -0.2 4,054,851 + -1.1 4,054,861 + -1.2 4,054,862 - -1.3 4,054,871 - -0.2 4,054,904 + CA264_17390 0.11 -1.1 4,054,921 + CA264_17390 0.15 +0.0 4,054,929 - CA264_17390 0.17 -0.4 4,054,943 + CA264_17390 0.20 -0.6 4,054,945 + CA264_17390 0.20 +1.1 4,055,262 - CA264_17390 0.89 +0.5 4,055,306 + -0.0 4,055,307 - -1.3 4,055,307 - -0.6 4,055,337 + +0.3 4,055,337 + +0.1 4,055,338 - +0.5 4,055,341 + +0.2 4,055,342 - -0.3 4,055,347 - +0.4 4,055,364 + -0.4 4,055,365 - -0.0 4,055,604 + -1.0 4,055,835 + +0.9 4,055,918 - -1.9 4,055,925 + -0.6 4,055,967 + -0.5 4,055,968 - +1.8 4,055,992 + -0.0
Or see this region's nucleotide sequence