Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14390 and CA264_14395 are separated by 18 nucleotides CA264_14395 and CA264_14400 are separated by 195 nucleotides CA264_14400 and CA264_14405 are separated by 105 nucleotides
CA264_14390: CA264_14390 - hypothetical protein, at 3,377,977 to 3,379,647
_14390
CA264_14395: CA264_14395 - endonuclease III, at 3,379,666 to 3,380,373
_14395
CA264_14400: CA264_14400 - MBL fold metallo-hydrolase, at 3,380,569 to 3,381,261
_14400
CA264_14405: CA264_14405 - hypothetical protein, at 3,381,367 to 3,382,002
_14405
Position (kb)
3379
3380
3381 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3378.689 kb on + strand, within CA264_14390 at 3378.689 kb on + strand, within CA264_14390 at 3378.730 kb on - strand, within CA264_14390 at 3378.797 kb on + strand, within CA264_14390 at 3378.798 kb on - strand, within CA264_14390 at 3378.798 kb on - strand, within CA264_14390 at 3378.802 kb on + strand, within CA264_14390 at 3378.802 kb on + strand, within CA264_14390 at 3378.846 kb on - strand, within CA264_14390 at 3378.873 kb on + strand, within CA264_14390 at 3378.875 kb on + strand, within CA264_14390 at 3378.943 kb on - strand, within CA264_14390 at 3379.213 kb on - strand, within CA264_14390 at 3379.588 kb on + strand at 3379.682 kb on - strand at 3379.709 kb on + strand at 3379.754 kb on + strand, within CA264_14395 at 3379.806 kb on - strand, within CA264_14395 at 3379.900 kb on + strand, within CA264_14395 at 3380.092 kb on + strand, within CA264_14395 at 3380.118 kb on - strand, within CA264_14395 at 3380.204 kb on + strand, within CA264_14395 at 3380.205 kb on - strand, within CA264_14395 at 3380.227 kb on - strand, within CA264_14395 at 3380.373 kb on + strand at 3380.373 kb on + strand at 3380.401 kb on + strand at 3380.477 kb on + strand at 3380.505 kb on + strand at 3380.517 kb on - strand at 3380.517 kb on - strand at 3380.519 kb on - strand at 3380.527 kb on - strand at 3380.545 kb on + strand at 3380.577 kb on + strand at 3380.585 kb on + strand at 3380.676 kb on + strand, within CA264_14400 at 3380.822 kb on + strand, within CA264_14400 at 3380.845 kb on - strand, within CA264_14400 at 3380.845 kb on - strand, within CA264_14400 at 3380.845 kb on - strand, within CA264_14400 at 3380.859 kb on + strand, within CA264_14400 at 3380.860 kb on - strand, within CA264_14400 at 3380.942 kb on + strand, within CA264_14400 at 3380.951 kb on - strand, within CA264_14400 at 3380.986 kb on + strand, within CA264_14400 at 3381.020 kb on - strand, within CA264_14400 at 3381.136 kb on + strand, within CA264_14400 at 3381.137 kb on - strand, within CA264_14400 at 3381.139 kb on + strand, within CA264_14400 at 3381.139 kb on + strand, within CA264_14400 at 3381.140 kb on - strand, within CA264_14400 at 3381.270 kb on + strand at 3381.270 kb on + strand at 3381.271 kb on - strand at 3381.273 kb on - strand at 3381.294 kb on - strand at 3381.347 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 3,378,689 + CA264_14390 0.43 -0.2 3,378,689 + CA264_14390 0.43 +1.1 3,378,730 - CA264_14390 0.45 +0.2 3,378,797 + CA264_14390 0.49 -0.3 3,378,798 - CA264_14390 0.49 +0.7 3,378,798 - CA264_14390 0.49 +1.1 3,378,802 + CA264_14390 0.49 -0.4 3,378,802 + CA264_14390 0.49 +0.1 3,378,846 - CA264_14390 0.52 -0.6 3,378,873 + CA264_14390 0.54 +0.3 3,378,875 + CA264_14390 0.54 +0.9 3,378,943 - CA264_14390 0.58 -0.2 3,379,213 - CA264_14390 0.74 -0.9 3,379,588 + -1.5 3,379,682 - +0.3 3,379,709 + -0.1 3,379,754 + CA264_14395 0.12 -0.6 3,379,806 - CA264_14395 0.20 -0.2 3,379,900 + CA264_14395 0.33 -0.2 3,380,092 + CA264_14395 0.60 -1.2 3,380,118 - CA264_14395 0.64 -0.1 3,380,204 + CA264_14395 0.76 -0.8 3,380,205 - CA264_14395 0.76 -0.6 3,380,227 - CA264_14395 0.79 +1.1 3,380,373 + +0.1 3,380,373 + +1.1 3,380,401 + -1.0 3,380,477 + +0.1 3,380,505 + +0.2 3,380,517 - -0.1 3,380,517 - -1.4 3,380,519 - -0.3 3,380,527 - +1.7 3,380,545 + +1.0 3,380,577 + +0.1 3,380,585 + -0.4 3,380,676 + CA264_14400 0.15 -0.1 3,380,822 + CA264_14400 0.37 -0.6 3,380,845 - CA264_14400 0.40 -0.9 3,380,845 - CA264_14400 0.40 -0.1 3,380,845 - CA264_14400 0.40 +2.7 3,380,859 + CA264_14400 0.42 +0.3 3,380,860 - CA264_14400 0.42 -1.5 3,380,942 + CA264_14400 0.54 +0.4 3,380,951 - CA264_14400 0.55 -0.3 3,380,986 + CA264_14400 0.60 +0.1 3,381,020 - CA264_14400 0.65 -0.4 3,381,136 + CA264_14400 0.82 -0.0 3,381,137 - CA264_14400 0.82 -0.3 3,381,139 + CA264_14400 0.82 -0.3 3,381,139 + CA264_14400 0.82 +0.4 3,381,140 - CA264_14400 0.82 +1.9 3,381,270 + -1.2 3,381,270 + +0.1 3,381,271 - -1.2 3,381,273 - -2.2 3,381,294 - +0.4 3,381,347 + -0.7
Or see this region's nucleotide sequence