Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13395 and CA264_13400 are separated by 111 nucleotides CA264_13400 and CA264_13405 are separated by 87 nucleotides
CA264_13395: CA264_13395 - aminopeptidase, at 3,124,049 to 3,124,963
_13395
CA264_13400: CA264_13400 - tol-pal system protein YbgF, at 3,125,075 to 3,126,322
_13400
CA264_13405: CA264_13405 - NAD-dependent dehydratase, at 3,126,410 to 3,127,378
_13405
Position (kb)
3125
3126
3127 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3124.075 kb on - strand at 3124.088 kb on - strand at 3124.088 kb on - strand at 3124.152 kb on - strand, within CA264_13395 at 3124.234 kb on - strand, within CA264_13395 at 3124.274 kb on + strand, within CA264_13395 at 3124.274 kb on + strand, within CA264_13395 at 3124.278 kb on + strand, within CA264_13395 at 3124.278 kb on + strand, within CA264_13395 at 3124.358 kb on - strand, within CA264_13395 at 3124.358 kb on - strand, within CA264_13395 at 3124.404 kb on + strand, within CA264_13395 at 3124.404 kb on + strand, within CA264_13395 at 3124.405 kb on - strand, within CA264_13395 at 3124.463 kb on - strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.615 kb on - strand, within CA264_13395 at 3124.615 kb on - strand, within CA264_13395 at 3124.651 kb on + strand, within CA264_13395 at 3124.651 kb on + strand, within CA264_13395 at 3124.693 kb on - strand, within CA264_13395 at 3124.884 kb on + strand at 3124.889 kb on + strand at 3125.018 kb on + strand at 3125.028 kb on - strand at 3125.030 kb on + strand at 3125.049 kb on + strand at 3125.056 kb on + strand at 3125.056 kb on + strand at 3125.056 kb on + strand at 3125.057 kb on - strand at 3125.057 kb on - strand at 3125.072 kb on + strand at 3125.072 kb on + strand at 3125.127 kb on + strand at 3125.127 kb on + strand at 3125.128 kb on - strand at 3125.175 kb on + strand at 3125.176 kb on - strand at 3125.196 kb on + strand at 3125.217 kb on + strand, within CA264_13400 at 3125.217 kb on + strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.295 kb on - strand, within CA264_13400 at 3125.392 kb on - strand, within CA264_13400 at 3125.442 kb on - strand, within CA264_13400 at 3125.456 kb on - strand, within CA264_13400 at 3125.477 kb on + strand, within CA264_13400 at 3125.478 kb on - strand, within CA264_13400 at 3125.529 kb on - strand, within CA264_13400 at 3125.679 kb on - strand, within CA264_13400 at 3125.708 kb on - strand, within CA264_13400 at 3125.708 kb on - strand, within CA264_13400 at 3125.812 kb on + strand, within CA264_13400 at 3125.893 kb on + strand, within CA264_13400 at 3125.893 kb on + strand, within CA264_13400 at 3125.897 kb on + strand, within CA264_13400 at 3125.897 kb on + strand, within CA264_13400 at 3125.912 kb on + strand, within CA264_13400 at 3125.927 kb on + strand, within CA264_13400 at 3125.928 kb on - strand, within CA264_13400 at 3125.946 kb on + strand, within CA264_13400 at 3126.011 kb on - strand, within CA264_13400 at 3126.051 kb on - strand, within CA264_13400 at 3126.063 kb on - strand, within CA264_13400 at 3126.065 kb on - strand, within CA264_13400 at 3126.065 kb on - strand, within CA264_13400 at 3126.176 kb on + strand, within CA264_13400 at 3126.237 kb on - strand at 3126.262 kb on + strand at 3126.297 kb on - strand at 3126.321 kb on - strand at 3126.329 kb on - strand at 3126.339 kb on - strand at 3126.339 kb on - strand at 3126.341 kb on + strand at 3126.342 kb on - strand at 3126.397 kb on + strand at 3126.397 kb on + strand at 3126.400 kb on + strand at 3126.400 kb on + strand at 3126.408 kb on - strand at 3126.408 kb on - strand at 3126.433 kb on + strand at 3126.434 kb on - strand at 3126.679 kb on - strand, within CA264_13405 at 3126.679 kb on - strand, within CA264_13405 at 3126.727 kb on - strand, within CA264_13405 at 3126.810 kb on - strand, within CA264_13405 at 3126.843 kb on + strand, within CA264_13405 at 3126.894 kb on + strand, within CA264_13405 at 3126.895 kb on - strand, within CA264_13405 at 3126.895 kb on - strand, within CA264_13405 at 3126.937 kb on - strand, within CA264_13405 at 3126.975 kb on + strand, within CA264_13405 at 3127.011 kb on + strand, within CA264_13405 at 3127.165 kb on - strand, within CA264_13405 at 3127.165 kb on - strand, within CA264_13405 at 3127.212 kb on + strand, within CA264_13405 at 3127.213 kb on - strand, within CA264_13405 at 3127.249 kb on + strand, within CA264_13405 at 3127.297 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 3,124,075 - -0.9 3,124,088 - -0.1 3,124,088 - +1.0 3,124,152 - CA264_13395 0.11 -1.2 3,124,234 - CA264_13395 0.20 +0.8 3,124,274 + CA264_13395 0.25 -0.8 3,124,274 + CA264_13395 0.25 -0.2 3,124,278 + CA264_13395 0.25 +0.1 3,124,278 + CA264_13395 0.25 +0.7 3,124,358 - CA264_13395 0.34 +1.0 3,124,358 - CA264_13395 0.34 -0.6 3,124,404 + CA264_13395 0.39 +0.0 3,124,404 + CA264_13395 0.39 -1.1 3,124,405 - CA264_13395 0.39 -0.6 3,124,463 - CA264_13395 0.45 +0.2 3,124,614 + CA264_13395 0.62 -0.9 3,124,614 + CA264_13395 0.62 -0.1 3,124,614 + CA264_13395 0.62 -0.5 3,124,614 + CA264_13395 0.62 -0.3 3,124,614 + CA264_13395 0.62 +0.1 3,124,615 - CA264_13395 0.62 -0.1 3,124,615 - CA264_13395 0.62 +0.6 3,124,651 + CA264_13395 0.66 +1.6 3,124,651 + CA264_13395 0.66 +0.3 3,124,693 - CA264_13395 0.70 -1.0 3,124,884 + +0.0 3,124,889 + -0.8 3,125,018 + +0.0 3,125,028 - +0.2 3,125,030 + -0.8 3,125,049 + -0.6 3,125,056 + +1.0 3,125,056 + +0.0 3,125,056 + +0.3 3,125,057 - -0.3 3,125,057 - -0.3 3,125,072 + -0.2 3,125,072 + -1.0 3,125,127 + +0.5 3,125,127 + -0.7 3,125,128 - -1.3 3,125,175 + -0.7 3,125,176 - -0.3 3,125,196 + +0.6 3,125,217 + CA264_13400 0.11 +0.8 3,125,217 + CA264_13400 0.11 +0.1 3,125,283 - CA264_13400 0.17 -0.9 3,125,283 - CA264_13400 0.17 +0.0 3,125,283 - CA264_13400 0.17 -0.6 3,125,283 - CA264_13400 0.17 +0.1 3,125,295 - CA264_13400 0.18 -1.0 3,125,392 - CA264_13400 0.25 -1.2 3,125,442 - CA264_13400 0.29 +2.3 3,125,456 - CA264_13400 0.31 -0.1 3,125,477 + CA264_13400 0.32 +0.5 3,125,478 - CA264_13400 0.32 +0.1 3,125,529 - CA264_13400 0.36 +0.8 3,125,679 - CA264_13400 0.48 +0.8 3,125,708 - CA264_13400 0.51 +0.2 3,125,708 - CA264_13400 0.51 -0.6 3,125,812 + CA264_13400 0.59 -0.2 3,125,893 + CA264_13400 0.66 +0.2 3,125,893 + CA264_13400 0.66 +2.0 3,125,897 + CA264_13400 0.66 +0.0 3,125,897 + CA264_13400 0.66 -0.5 3,125,912 + CA264_13400 0.67 +0.2 3,125,927 + CA264_13400 0.68 -0.3 3,125,928 - CA264_13400 0.68 -0.3 3,125,946 + CA264_13400 0.70 -0.7 3,126,011 - CA264_13400 0.75 +0.7 3,126,051 - CA264_13400 0.78 +0.2 3,126,063 - CA264_13400 0.79 -0.3 3,126,065 - CA264_13400 0.79 +0.6 3,126,065 - CA264_13400 0.79 -1.3 3,126,176 + CA264_13400 0.88 +0.3 3,126,237 - +0.3 3,126,262 + -0.6 3,126,297 - -0.5 3,126,321 - -1.8 3,126,329 - -1.2 3,126,339 - +0.4 3,126,339 - +0.0 3,126,341 + +0.7 3,126,342 - -0.4 3,126,397 + -1.3 3,126,397 + +2.0 3,126,400 + -0.5 3,126,400 + -0.8 3,126,408 - -0.4 3,126,408 - -1.8 3,126,433 + +0.0 3,126,434 - +1.0 3,126,679 - CA264_13405 0.28 -4.6 3,126,679 - CA264_13405 0.28 -1.7 3,126,727 - CA264_13405 0.33 -4.4 3,126,810 - CA264_13405 0.41 -0.6 3,126,843 + CA264_13405 0.45 -1.6 3,126,894 + CA264_13405 0.50 -1.6 3,126,895 - CA264_13405 0.50 -3.7 3,126,895 - CA264_13405 0.50 -2.0 3,126,937 - CA264_13405 0.54 +0.0 3,126,975 + CA264_13405 0.58 -1.6 3,127,011 + CA264_13405 0.62 -1.8 3,127,165 - CA264_13405 0.78 +1.0 3,127,165 - CA264_13405 0.78 -3.2 3,127,212 + CA264_13405 0.83 -0.6 3,127,213 - CA264_13405 0.83 -1.6 3,127,249 + CA264_13405 0.87 -1.3 3,127,297 - -2.5
Or see this region's nucleotide sequence