Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09130 and CA264_09135 are separated by 228 nucleotides CA264_09135 and CA264_09140 are separated by 180 nucleotides
CA264_09130: CA264_09130 - hypothetical protein, at 2,138,661 to 2,140,955
_09130
CA264_09135: CA264_09135 - peptidase S8 and S53 subtilisin kexin sedolisin, at 2,141,184 to 2,142,713
_09135
CA264_09140: CA264_09140 - chloramphenicol acetyltransferase, at 2,142,894 to 2,143,544
_09140
Position (kb)
2141
2142
2143 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2140.199 kb on + strand, within CA264_09130 at 2140.234 kb on - strand, within CA264_09130 at 2140.301 kb on - strand, within CA264_09130 at 2140.421 kb on + strand, within CA264_09130 at 2140.590 kb on + strand, within CA264_09130 at 2140.591 kb on - strand, within CA264_09130 at 2140.639 kb on - strand, within CA264_09130 at 2140.695 kb on + strand, within CA264_09130 at 2140.696 kb on - strand, within CA264_09130 at 2140.756 kb on - strand at 2140.791 kb on - strand at 2140.792 kb on + strand at 2140.793 kb on - strand at 2140.793 kb on - strand at 2140.886 kb on - strand at 2140.987 kb on - strand at 2140.990 kb on + strand at 2141.017 kb on + strand at 2141.017 kb on + strand at 2141.078 kb on + strand at 2141.080 kb on + strand at 2141.083 kb on + strand at 2141.083 kb on + strand at 2141.084 kb on - strand at 2141.209 kb on + strand at 2141.224 kb on + strand at 2141.419 kb on + strand, within CA264_09135 at 2141.420 kb on - strand, within CA264_09135 at 2141.420 kb on - strand, within CA264_09135 at 2141.453 kb on - strand, within CA264_09135 at 2141.468 kb on + strand, within CA264_09135 at 2141.598 kb on + strand, within CA264_09135 at 2141.599 kb on - strand, within CA264_09135 at 2141.639 kb on + strand, within CA264_09135 at 2141.812 kb on + strand, within CA264_09135 at 2141.813 kb on - strand, within CA264_09135 at 2141.833 kb on + strand, within CA264_09135 at 2141.834 kb on - strand, within CA264_09135 at 2142.163 kb on - strand, within CA264_09135 at 2142.163 kb on - strand, within CA264_09135 at 2142.163 kb on - strand, within CA264_09135 at 2142.314 kb on + strand, within CA264_09135 at 2142.317 kb on + strand, within CA264_09135 at 2142.336 kb on - strand, within CA264_09135 at 2142.355 kb on - strand, within CA264_09135 at 2142.396 kb on + strand, within CA264_09135 at 2142.396 kb on + strand, within CA264_09135 at 2142.396 kb on + strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.400 kb on + strand, within CA264_09135 at 2142.401 kb on - strand, within CA264_09135 at 2142.401 kb on - strand, within CA264_09135 at 2142.401 kb on - strand, within CA264_09135 at 2142.401 kb on - strand, within CA264_09135 at 2142.402 kb on + strand, within CA264_09135 at 2142.428 kb on - strand, within CA264_09135 at 2142.445 kb on - strand, within CA264_09135 at 2142.445 kb on - strand, within CA264_09135 at 2142.450 kb on + strand, within CA264_09135 at 2142.451 kb on - strand, within CA264_09135 at 2142.462 kb on + strand, within CA264_09135 at 2142.462 kb on + strand, within CA264_09135 at 2142.463 kb on - strand, within CA264_09135 at 2142.463 kb on - strand, within CA264_09135 at 2142.471 kb on - strand, within CA264_09135 at 2142.507 kb on + strand, within CA264_09135 at 2142.507 kb on + strand, within CA264_09135 at 2142.511 kb on - strand, within CA264_09135 at 2142.511 kb on - strand, within CA264_09135 at 2142.531 kb on - strand, within CA264_09135 at 2142.663 kb on + strand at 2142.663 kb on + strand at 2142.663 kb on + strand at 2142.664 kb on - strand at 2142.664 kb on - strand at 2142.666 kb on + strand at 2142.666 kb on + strand at 2142.723 kb on + strand at 2142.723 kb on + strand at 2142.724 kb on - strand at 2142.724 kb on - strand at 2142.724 kb on - strand at 2142.778 kb on + strand at 2142.798 kb on + strand at 2142.845 kb on - strand at 2142.875 kb on - strand at 2142.882 kb on - strand at 2142.906 kb on + strand at 2142.975 kb on - strand, within CA264_09140 at 2143.006 kb on + strand, within CA264_09140 at 2143.006 kb on + strand, within CA264_09140 at 2143.023 kb on + strand, within CA264_09140 at 2143.024 kb on - strand, within CA264_09140 at 2143.143 kb on + strand, within CA264_09140 at 2143.191 kb on - strand, within CA264_09140 at 2143.290 kb on + strand, within CA264_09140 at 2143.291 kb on - strand, within CA264_09140 at 2143.291 kb on - strand, within CA264_09140 at 2143.297 kb on - strand, within CA264_09140 at 2143.297 kb on - strand, within CA264_09140 at 2143.315 kb on + strand, within CA264_09140 at 2143.367 kb on + strand, within CA264_09140 at 2143.441 kb on + strand, within CA264_09140 at 2143.460 kb on - strand, within CA264_09140 at 2143.509 kb on + strand at 2143.522 kb on + strand at 2143.543 kb on - strand at 2143.551 kb on - strand at 2143.551 kb on - strand at 2143.556 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 2,140,199 + CA264_09130 0.67 -1.4 2,140,234 - CA264_09130 0.69 -0.5 2,140,301 - CA264_09130 0.71 +0.1 2,140,421 + CA264_09130 0.77 -0.1 2,140,590 + CA264_09130 0.84 -0.4 2,140,591 - CA264_09130 0.84 -1.0 2,140,639 - CA264_09130 0.86 -1.4 2,140,695 + CA264_09130 0.89 +0.2 2,140,696 - CA264_09130 0.89 -0.6 2,140,756 - -0.4 2,140,791 - -0.4 2,140,792 + +0.7 2,140,793 - -0.2 2,140,793 - -1.0 2,140,886 - -0.3 2,140,987 - -0.8 2,140,990 + -0.6 2,141,017 + -0.1 2,141,017 + -0.1 2,141,078 + -0.1 2,141,080 + -1.2 2,141,083 + -0.1 2,141,083 + -0.4 2,141,084 - +1.9 2,141,209 + -0.7 2,141,224 + -0.4 2,141,419 + CA264_09135 0.15 +0.2 2,141,420 - CA264_09135 0.15 -0.8 2,141,420 - CA264_09135 0.15 +0.2 2,141,453 - CA264_09135 0.18 -0.3 2,141,468 + CA264_09135 0.19 -0.1 2,141,598 + CA264_09135 0.27 +0.2 2,141,599 - CA264_09135 0.27 +0.9 2,141,639 + CA264_09135 0.30 -1.6 2,141,812 + CA264_09135 0.41 +0.2 2,141,813 - CA264_09135 0.41 -1.1 2,141,833 + CA264_09135 0.42 +0.1 2,141,834 - CA264_09135 0.42 +0.6 2,142,163 - CA264_09135 0.64 +0.1 2,142,163 - CA264_09135 0.64 -0.1 2,142,163 - CA264_09135 0.64 +0.9 2,142,314 + CA264_09135 0.74 -0.4 2,142,317 + CA264_09135 0.74 +0.1 2,142,336 - CA264_09135 0.75 +0.9 2,142,355 - CA264_09135 0.77 +0.1 2,142,396 + CA264_09135 0.79 +0.6 2,142,396 + CA264_09135 0.79 +1.5 2,142,396 + CA264_09135 0.79 +1.3 2,142,397 - CA264_09135 0.79 +0.5 2,142,397 - CA264_09135 0.79 -1.4 2,142,397 - CA264_09135 0.79 +0.9 2,142,397 - CA264_09135 0.79 -0.4 2,142,397 - CA264_09135 0.79 +0.5 2,142,400 + CA264_09135 0.79 +0.4 2,142,401 - CA264_09135 0.80 -1.0 2,142,401 - CA264_09135 0.80 -0.0 2,142,401 - CA264_09135 0.80 +0.2 2,142,401 - CA264_09135 0.80 -0.4 2,142,402 + CA264_09135 0.80 -0.7 2,142,428 - CA264_09135 0.81 -0.4 2,142,445 - CA264_09135 0.82 -0.3 2,142,445 - CA264_09135 0.82 -0.7 2,142,450 + CA264_09135 0.83 -1.1 2,142,451 - CA264_09135 0.83 +0.1 2,142,462 + CA264_09135 0.84 +0.2 2,142,462 + CA264_09135 0.84 -0.3 2,142,463 - CA264_09135 0.84 -0.7 2,142,463 - CA264_09135 0.84 -1.2 2,142,471 - CA264_09135 0.84 -0.5 2,142,507 + CA264_09135 0.86 -0.9 2,142,507 + CA264_09135 0.86 +0.4 2,142,511 - CA264_09135 0.87 -0.2 2,142,511 - CA264_09135 0.87 -0.1 2,142,531 - CA264_09135 0.88 +0.4 2,142,663 + -0.1 2,142,663 + -0.3 2,142,663 + -0.3 2,142,664 - -1.7 2,142,664 - -0.7 2,142,666 + -0.8 2,142,666 + +0.1 2,142,723 + -0.2 2,142,723 + -0.7 2,142,724 - +0.3 2,142,724 - -1.6 2,142,724 - -0.5 2,142,778 + +0.3 2,142,798 + -0.1 2,142,845 - -0.1 2,142,875 - +0.1 2,142,882 - +0.7 2,142,906 + +1.9 2,142,975 - CA264_09140 0.12 -1.1 2,143,006 + CA264_09140 0.17 -2.7 2,143,006 + CA264_09140 0.17 +0.7 2,143,023 + CA264_09140 0.20 +0.4 2,143,024 - CA264_09140 0.20 -1.1 2,143,143 + CA264_09140 0.38 -0.2 2,143,191 - CA264_09140 0.46 +0.1 2,143,290 + CA264_09140 0.61 -0.6 2,143,291 - CA264_09140 0.61 -2.3 2,143,291 - CA264_09140 0.61 -1.4 2,143,297 - CA264_09140 0.62 -0.3 2,143,297 - CA264_09140 0.62 -0.4 2,143,315 + CA264_09140 0.65 +0.6 2,143,367 + CA264_09140 0.73 +0.4 2,143,441 + CA264_09140 0.84 +0.8 2,143,460 - CA264_09140 0.87 -0.1 2,143,509 + -1.0 2,143,522 + -0.1 2,143,543 - +0.7 2,143,551 - +0.3 2,143,551 - -1.0 2,143,556 + +1.2
Or see this region's nucleotide sequence