Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02495 and CA264_02500 are separated by 647 nucleotides CA264_02500 and CA264_02505 are separated by 50 nucleotides CA264_02505 and CA264_02510 are separated by 880 nucleotides
CA264_02495: CA264_02495 - hypothetical protein, at 579,925 to 580,821
_02495
CA264_02500: CA264_02500 - hypothetical protein, at 581,469 to 581,738
_02500
CA264_02505: CA264_02505 - hypothetical protein, at 581,789 to 582,454
_02505
CA264_02510: CA264_02510 - TonB-dependent receptor, at 583,335 to 585,830
_02510
Position (kb)
581
582
583 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 580.803 kb on - strand at 580.803 kb on - strand at 580.803 kb on - strand at 580.803 kb on - strand at 580.818 kb on - strand at 580.927 kb on + strand at 580.942 kb on + strand at 580.942 kb on + strand at 580.942 kb on + strand at 580.942 kb on + strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.945 kb on - strand at 580.945 kb on - strand at 580.946 kb on + strand at 580.947 kb on - strand at 580.959 kb on - strand at 580.961 kb on + strand at 580.964 kb on + strand at 580.965 kb on - strand at 581.081 kb on - strand at 581.081 kb on - strand at 581.093 kb on + strand at 581.100 kb on - strand at 581.100 kb on - strand at 581.101 kb on + strand at 581.102 kb on - strand at 581.104 kb on + strand at 581.178 kb on - strand at 581.178 kb on - strand at 581.191 kb on + strand at 581.191 kb on + strand at 581.191 kb on + strand at 581.197 kb on + strand at 581.198 kb on - strand at 581.201 kb on - strand at 581.250 kb on - strand at 581.258 kb on - strand at 581.281 kb on - strand at 581.283 kb on - strand at 581.283 kb on - strand at 581.290 kb on + strand at 581.308 kb on + strand at 581.308 kb on + strand at 581.309 kb on - strand at 581.309 kb on - strand at 581.317 kb on + strand at 581.319 kb on + strand at 581.325 kb on + strand at 581.326 kb on - strand at 581.326 kb on - strand at 581.334 kb on - strand at 581.444 kb on + strand at 581.444 kb on + strand at 581.444 kb on + strand at 581.444 kb on + strand at 581.606 kb on - strand, within CA264_02500 at 581.657 kb on + strand, within CA264_02500 at 581.657 kb on + strand, within CA264_02500 at 581.657 kb on + strand, within CA264_02500 at 581.682 kb on + strand, within CA264_02500 at 581.683 kb on - strand, within CA264_02500 at 581.722 kb on - strand at 581.732 kb on - strand at 581.790 kb on + strand at 581.889 kb on + strand, within CA264_02505 at 581.899 kb on + strand, within CA264_02505 at 581.905 kb on + strand, within CA264_02505 at 581.963 kb on - strand, within CA264_02505 at 581.963 kb on - strand, within CA264_02505 at 582.005 kb on - strand, within CA264_02505 at 582.051 kb on + strand, within CA264_02505 at 582.052 kb on - strand, within CA264_02505 at 582.162 kb on - strand, within CA264_02505 at 582.162 kb on - strand, within CA264_02505 at 582.162 kb on - strand, within CA264_02505 at 582.162 kb on - strand, within CA264_02505 at 582.186 kb on - strand, within CA264_02505 at 582.207 kb on + strand, within CA264_02505 at 582.332 kb on + strand, within CA264_02505 at 582.336 kb on + strand, within CA264_02505 at 582.337 kb on - strand, within CA264_02505 at 582.378 kb on - strand, within CA264_02505 at 582.454 kb on + strand at 582.482 kb on - strand at 582.485 kb on + strand at 582.485 kb on + strand at 582.485 kb on + strand at 582.486 kb on - strand at 582.507 kb on - strand at 582.517 kb on - strand at 582.517 kb on - strand at 582.531 kb on + strand at 582.532 kb on - strand at 582.532 kb on - strand at 582.534 kb on + strand at 582.534 kb on + strand at 582.535 kb on - strand at 582.556 kb on - strand at 582.565 kb on - strand at 582.615 kb on + strand at 582.658 kb on - strand at 582.658 kb on - strand at 582.768 kb on - strand at 582.798 kb on + strand at 582.801 kb on - strand at 582.838 kb on + strand at 582.847 kb on - strand at 582.916 kb on - strand at 582.970 kb on - strand at 583.141 kb on - strand at 583.141 kb on - strand at 583.160 kb on + strand at 583.160 kb on + strand at 583.161 kb on - strand at 583.162 kb on + strand at 583.163 kb on - strand at 583.163 kb on - strand at 583.166 kb on + strand at 583.261 kb on - strand at 583.308 kb on + strand at 583.312 kb on + strand at 583.312 kb on + strand at 583.318 kb on + strand at 583.319 kb on - strand at 583.322 kb on + strand at 583.322 kb on + strand at 583.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 580,803 - +0.1 580,803 - -0.7 580,803 - +0.9 580,803 - +0.1 580,818 - +0.8 580,927 + -2.1 580,942 + +0.5 580,942 + +0.9 580,942 + +0.1 580,942 + +0.9 580,943 - +0.6 580,943 - -0.1 580,943 - +0.4 580,943 - +0.0 580,943 - +0.9 580,943 - -0.2 580,945 - +1.5 580,945 - -0.1 580,946 + +0.8 580,947 - -0.3 580,959 - -0.4 580,961 + +1.5 580,964 + -0.7 580,965 - -0.4 581,081 - -0.2 581,081 - -0.1 581,093 + -0.1 581,100 - +0.2 581,100 - +0.1 581,101 + -0.9 581,102 - +0.1 581,104 + -0.0 581,178 - -2.6 581,178 - -0.0 581,191 + +1.4 581,191 + +0.9 581,191 + +0.2 581,197 + -1.1 581,198 - +1.7 581,201 - +1.4 581,250 - +3.3 581,258 - -0.1 581,281 - -0.6 581,283 - -0.1 581,283 - +1.7 581,290 + -0.1 581,308 + -0.4 581,308 + +1.4 581,309 - +0.0 581,309 - -0.3 581,317 + -0.9 581,319 + -0.6 581,325 + -0.2 581,326 - -1.2 581,326 - +0.5 581,334 - -0.6 581,444 + +0.7 581,444 + +0.0 581,444 + -0.4 581,444 + +0.3 581,606 - CA264_02500 0.51 +1.5 581,657 + CA264_02500 0.70 +0.5 581,657 + CA264_02500 0.70 -0.3 581,657 + CA264_02500 0.70 -0.2 581,682 + CA264_02500 0.79 +0.4 581,683 - CA264_02500 0.79 +0.4 581,722 - +0.4 581,732 - +1.4 581,790 + -1.3 581,889 + CA264_02505 0.15 +1.0 581,899 + CA264_02505 0.17 -0.6 581,905 + CA264_02505 0.17 -0.6 581,963 - CA264_02505 0.26 -0.6 581,963 - CA264_02505 0.26 +1.7 582,005 - CA264_02505 0.32 -0.0 582,051 + CA264_02505 0.39 -0.0 582,052 - CA264_02505 0.39 +0.2 582,162 - CA264_02505 0.56 +0.4 582,162 - CA264_02505 0.56 +0.6 582,162 - CA264_02505 0.56 -0.0 582,162 - CA264_02505 0.56 -2.4 582,186 - CA264_02505 0.60 -0.3 582,207 + CA264_02505 0.63 -1.4 582,332 + CA264_02505 0.82 -0.0 582,336 + CA264_02505 0.82 +0.4 582,337 - CA264_02505 0.82 +0.3 582,378 - CA264_02505 0.88 +0.3 582,454 + +0.2 582,482 - -1.2 582,485 + +0.7 582,485 + -0.5 582,485 + +1.0 582,486 - -0.0 582,507 - -0.2 582,517 - -0.9 582,517 - -0.0 582,531 + -0.0 582,532 - -0.6 582,532 - +1.0 582,534 + +0.2 582,534 + -2.6 582,535 - -1.0 582,556 - +2.5 582,565 - -0.0 582,615 + +1.7 582,658 - -0.7 582,658 - +0.1 582,768 - +0.7 582,798 + +1.0 582,801 - +0.1 582,838 + +0.1 582,847 - -0.3 582,916 - -1.0 582,970 - -0.7 583,141 - +0.2 583,141 - -0.4 583,160 + -0.7 583,160 + -0.5 583,161 - -0.3 583,162 + +0.5 583,163 - +0.0 583,163 - -1.6 583,166 + +2.5 583,261 - -0.2 583,308 + -0.2 583,312 + -0.3 583,312 + -0.2 583,318 + -0.7 583,319 - -1.2 583,322 + -0.0 583,322 + -1.9 583,323 - +0.1
Or see this region's nucleotide sequence