Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01450 and CA264_01455 are separated by 97 nucleotides CA264_01455 and CA264_01460 are separated by 10 nucleotides CA264_01460 and CA264_01465 are separated by 219 nucleotides CA264_01465 and CA264_01470 are separated by 94 nucleotides CA264_01470 and CA264_01475 are separated by 402 nucleotides
CA264_01450: CA264_01450 - 16S ribosomal RNA, at 344,144 to 345,664
_01450
CA264_01455: CA264_01455 - tRNA-Ile, at 345,762 to 345,838
_01455
CA264_01460: CA264_01460 - tRNA-Ala, at 345,849 to 345,922
_01460
CA264_01465: CA264_01465 - 23S ribosomal RNA, at 346,142 to 349,027
_01465
CA264_01470: CA264_01470 - 5S ribosomal RNA, at 349,122 to 349,233
_01470
CA264_01475: CA264_01475 - hypothetical protein, at 349,636 to 351,642
_01475
Position (kb) 346
347
348
349
350 Strain fitness (log2 ratio) -1
0
1
2 at 349.567 kb on + strand at 349.580 kb on + strand at 349.588 kb on + strand at 349.588 kb on + strand at 349.588 kb on + strand at 349.589 kb on - strand at 349.626 kb on - strand at 349.636 kb on - strand at 349.646 kb on + strand at 349.646 kb on + strand at 349.646 kb on + strand at 349.646 kb on + strand at 349.646 kb on + strand at 349.648 kb on + strand at 349.648 kb on + strand at 349.722 kb on + strand at 349.730 kb on + strand at 349.755 kb on - strand at 349.923 kb on - strand, within CA264_01475 at 349.927 kb on - strand, within CA264_01475 at 349.933 kb on + strand, within CA264_01475 at 349.933 kb on + strand, within CA264_01475 at 349.933 kb on + strand, within CA264_01475 at 349.934 kb on - strand, within CA264_01475 at 349.935 kb on + strand, within CA264_01475 at 349.935 kb on + strand, within CA264_01475 at 349.936 kb on - strand, within CA264_01475 at 349.936 kb on - strand, within CA264_01475 at 349.936 kb on - strand, within CA264_01475 at 349.950 kb on - strand, within CA264_01475 at 349.950 kb on - strand, within CA264_01475 at 349.950 kb on - strand, within CA264_01475 at 349.950 kb on - strand, within CA264_01475
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 349,567 + +0.2 349,580 + -0.0 349,588 + -0.2 349,588 + -0.9 349,588 + +0.7 349,589 - -0.4 349,626 - +1.2 349,636 - -0.6 349,646 + -0.1 349,646 + -0.6 349,646 + +1.0 349,646 + -0.0 349,646 + +0.1 349,648 + +0.6 349,648 + -0.6 349,722 + -0.6 349,730 + -0.5 349,755 - -0.9 349,923 - CA264_01475 0.14 +1.1 349,927 - CA264_01475 0.14 -1.0 349,933 + CA264_01475 0.15 -0.7 349,933 + CA264_01475 0.15 -0.4 349,933 + CA264_01475 0.15 -1.0 349,934 - CA264_01475 0.15 +0.6 349,935 + CA264_01475 0.15 +2.0 349,935 + CA264_01475 0.15 -0.1 349,936 - CA264_01475 0.15 +0.5 349,936 - CA264_01475 0.15 +1.3 349,936 - CA264_01475 0.15 +0.3 349,950 - CA264_01475 0.16 -0.7 349,950 - CA264_01475 0.16 -0.4 349,950 - CA264_01475 0.16 +0.2 349,950 - CA264_01475 0.16 -1.3
Or see this region's nucleotide sequence