Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00510 and CA264_00515 are separated by 51 nucleotides CA264_00515 and CA264_00520 are separated by 59 nucleotides
CA264_00510: CA264_00510 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 115,113 to 115,955
_00510
CA264_00515: CA264_00515 - hypothetical protein, at 116,007 to 117,254
_00515
CA264_00520: CA264_00520 - alcohol dehydrogenase, at 117,314 to 118,264
_00520
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 115.025 kb on + strand at 115.067 kb on - strand at 115.067 kb on - strand at 115.095 kb on - strand at 115.955 kb on + strand at 115.995 kb on - strand at 115.995 kb on - strand at 116.009 kb on - strand at 116.015 kb on + strand at 116.016 kb on - strand at 116.018 kb on + strand at 116.019 kb on - strand at 116.028 kb on - strand at 116.098 kb on - strand at 116.098 kb on - strand at 116.108 kb on - strand at 116.120 kb on + strand at 116.120 kb on + strand at 116.121 kb on - strand at 116.124 kb on + strand at 116.125 kb on - strand at 116.194 kb on - strand, within CA264_00515 at 116.216 kb on + strand, within CA264_00515 at 116.243 kb on - strand, within CA264_00515 at 116.248 kb on + strand, within CA264_00515 at 116.248 kb on + strand, within CA264_00515 at 116.249 kb on - strand, within CA264_00515 at 116.249 kb on - strand, within CA264_00515 at 116.249 kb on - strand, within CA264_00515 at 116.249 kb on - strand, within CA264_00515 at 116.354 kb on + strand, within CA264_00515 at 116.375 kb on + strand, within CA264_00515 at 116.376 kb on - strand, within CA264_00515 at 116.376 kb on - strand, within CA264_00515 at 116.407 kb on + strand, within CA264_00515 at 116.566 kb on + strand, within CA264_00515 at 116.567 kb on - strand, within CA264_00515 at 116.797 kb on + strand, within CA264_00515 at 116.825 kb on - strand, within CA264_00515 at 116.856 kb on + strand, within CA264_00515 at 116.859 kb on - strand, within CA264_00515 at 116.878 kb on - strand, within CA264_00515 at 116.945 kb on + strand, within CA264_00515 at 117.132 kb on - strand at 117.169 kb on - strand at 117.170 kb on + strand at 117.170 kb on + strand at 117.170 kb on + strand at 117.171 kb on - strand at 117.191 kb on + strand at 117.201 kb on + strand at 117.201 kb on + strand at 117.201 kb on + strand at 117.202 kb on - strand at 117.204 kb on - strand at 117.209 kb on + strand at 117.210 kb on - strand at 117.281 kb on + strand at 117.315 kb on + strand at 117.446 kb on + strand, within CA264_00520 at 117.448 kb on + strand, within CA264_00520 at 117.449 kb on - strand, within CA264_00520 at 117.467 kb on - strand, within CA264_00520 at 117.550 kb on + strand, within CA264_00520 at 117.633 kb on + strand, within CA264_00520 at 117.712 kb on - strand, within CA264_00520 at 117.712 kb on - strand, within CA264_00520 at 117.816 kb on - strand, within CA264_00520 at 117.830 kb on + strand, within CA264_00520 at 117.830 kb on + strand, within CA264_00520 at 117.898 kb on - strand, within CA264_00520 at 117.900 kb on - strand, within CA264_00520 at 117.970 kb on + strand, within CA264_00520 at 117.970 kb on + strand, within CA264_00520 at 117.971 kb on - strand, within CA264_00520 at 117.971 kb on - strand, within CA264_00520 at 117.991 kb on + strand, within CA264_00520 at 118.109 kb on + strand, within CA264_00520 at 118.109 kb on + strand, within CA264_00520 at 118.110 kb on - strand, within CA264_00520 at 118.110 kb on - strand, within CA264_00520 at 118.147 kb on - strand, within CA264_00520 at 118.148 kb on + strand, within CA264_00520 at 118.148 kb on + strand, within CA264_00520 at 118.148 kb on + strand, within CA264_00520 at 118.149 kb on - strand, within CA264_00520 at 118.199 kb on + strand at 118.215 kb on - strand at 118.247 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 115,025 + -0.2 115,067 - -1.3 115,067 - +0.7 115,095 - -0.5 115,955 + +0.3 115,995 - -0.1 115,995 - +0.6 116,009 - +1.9 116,015 + +1.1 116,016 - +0.9 116,018 + -2.1 116,019 - -0.9 116,028 - +0.1 116,098 - +2.1 116,098 - -1.1 116,108 - +0.5 116,120 + +0.1 116,120 + -1.2 116,121 - -1.2 116,124 + +0.1 116,125 - +0.1 116,194 - CA264_00515 0.15 -0.3 116,216 + CA264_00515 0.17 -0.6 116,243 - CA264_00515 0.19 +0.7 116,248 + CA264_00515 0.19 +0.5 116,248 + CA264_00515 0.19 +0.1 116,249 - CA264_00515 0.19 -0.9 116,249 - CA264_00515 0.19 +0.1 116,249 - CA264_00515 0.19 -0.3 116,249 - CA264_00515 0.19 +0.6 116,354 + CA264_00515 0.28 +0.1 116,375 + CA264_00515 0.29 -0.1 116,376 - CA264_00515 0.30 -0.8 116,376 - CA264_00515 0.30 -0.2 116,407 + CA264_00515 0.32 +0.3 116,566 + CA264_00515 0.45 -0.2 116,567 - CA264_00515 0.45 -0.5 116,797 + CA264_00515 0.63 -1.5 116,825 - CA264_00515 0.66 -0.9 116,856 + CA264_00515 0.68 -0.4 116,859 - CA264_00515 0.68 -0.7 116,878 - CA264_00515 0.70 +0.0 116,945 + CA264_00515 0.75 -0.2 117,132 - -0.9 117,169 - -0.2 117,170 + +2.3 117,170 + -0.8 117,170 + +0.1 117,171 - +0.5 117,191 + +0.2 117,201 + -0.9 117,201 + -0.9 117,201 + -1.9 117,202 - -0.8 117,204 - +1.1 117,209 + +0.5 117,210 - +0.5 117,281 + -1.1 117,315 + -0.8 117,446 + CA264_00520 0.14 -0.1 117,448 + CA264_00520 0.14 -0.4 117,449 - CA264_00520 0.14 +0.1 117,467 - CA264_00520 0.16 +0.6 117,550 + CA264_00520 0.25 +0.3 117,633 + CA264_00520 0.34 +0.1 117,712 - CA264_00520 0.42 -0.7 117,712 - CA264_00520 0.42 +0.1 117,816 - CA264_00520 0.53 +0.1 117,830 + CA264_00520 0.54 -0.4 117,830 + CA264_00520 0.54 -0.4 117,898 - CA264_00520 0.61 -0.2 117,900 - CA264_00520 0.62 +1.5 117,970 + CA264_00520 0.69 -0.8 117,970 + CA264_00520 0.69 +0.0 117,971 - CA264_00520 0.69 -0.5 117,971 - CA264_00520 0.69 -0.8 117,991 + CA264_00520 0.71 +0.4 118,109 + CA264_00520 0.84 -0.6 118,109 + CA264_00520 0.84 -0.9 118,110 - CA264_00520 0.84 -0.6 118,110 - CA264_00520 0.84 +0.5 118,147 - CA264_00520 0.88 +1.1 118,148 + CA264_00520 0.88 +0.1 118,148 + CA264_00520 0.88 +0.1 118,148 + CA264_00520 0.88 -2.8 118,149 - CA264_00520 0.88 -0.9 118,199 + -0.4 118,215 - -0.2 118,247 + +0.4
Or see this region's nucleotide sequence