Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04150 and ABID97_RS04155 overlap by 4 nucleotides ABID97_RS04155 and ABID97_RS04160 are separated by 71 nucleotides ABID97_RS04160 and ABID97_RS04165 are separated by 123 nucleotides
ABID97_RS04150: ABID97_RS04150 - acetyl-CoA carboxylase biotin carboxylase subunit, at 850,863 to 852,812
_RS04150
ABID97_RS04155: ABID97_RS04155 - acyl-CoA carboxylase subunit beta, at 852,809 to 854,419
_RS04155
ABID97_RS04160: ABID97_RS04160 - MHYT domain-containing protein, at 854,491 to 855,264
_RS04160
ABID97_RS04165: ABID97_RS04165 - hypothetical protein, at 855,388 to 857,046
_RS04165
Position (kb) 852
853
854
855 Strain fitness (log2 ratio) -2
-1
0
1
2 at 852.008 kb on - strand, within ABID97_RS04150 at 852.410 kb on - strand, within ABID97_RS04150 at 853.159 kb on - strand, within ABID97_RS04155 at 853.159 kb on - strand, within ABID97_RS04155 at 853.159 kb on - strand, within ABID97_RS04155 at 853.173 kb on + strand, within ABID97_RS04155 at 853.173 kb on + strand, within ABID97_RS04155 at 853.174 kb on - strand, within ABID97_RS04155 at 853.174 kb on - strand, within ABID97_RS04155 at 853.287 kb on + strand, within ABID97_RS04155 at 853.456 kb on - strand, within ABID97_RS04155 at 853.572 kb on + strand, within ABID97_RS04155 at 853.573 kb on - strand, within ABID97_RS04155 at 853.677 kb on + strand, within ABID97_RS04155 at 853.677 kb on + strand, within ABID97_RS04155 at 853.953 kb on + strand, within ABID97_RS04155 at 853.995 kb on + strand, within ABID97_RS04155 at 853.995 kb on + strand, within ABID97_RS04155 at 854.492 kb on + strand at 854.555 kb on + strand at 854.555 kb on + strand at 854.555 kb on + strand at 854.555 kb on + strand at 854.606 kb on + strand, within ABID97_RS04160 at 854.606 kb on + strand, within ABID97_RS04160 at 854.606 kb on + strand, within ABID97_RS04160 at 854.606 kb on + strand, within ABID97_RS04160 at 854.607 kb on - strand, within ABID97_RS04160 at 854.607 kb on - strand, within ABID97_RS04160 at 854.607 kb on - strand, within ABID97_RS04160 at 854.681 kb on + strand, within ABID97_RS04160 at 854.681 kb on + strand, within ABID97_RS04160 at 854.681 kb on + strand, within ABID97_RS04160 at 854.682 kb on - strand, within ABID97_RS04160 at 854.867 kb on + strand, within ABID97_RS04160 at 854.867 kb on + strand, within ABID97_RS04160 at 854.867 kb on + strand, within ABID97_RS04160 at 854.867 kb on + strand, within ABID97_RS04160 at 854.867 kb on + strand, within ABID97_RS04160 at 854.867 kb on + strand, within ABID97_RS04160 at 854.867 kb on + strand, within ABID97_RS04160 at 854.868 kb on - strand, within ABID97_RS04160 at 854.868 kb on - strand, within ABID97_RS04160 at 854.868 kb on - strand, within ABID97_RS04160 at 854.868 kb on - strand, within ABID97_RS04160 at 854.869 kb on - strand, within ABID97_RS04160 at 854.954 kb on + strand, within ABID97_RS04160 at 854.954 kb on + strand, within ABID97_RS04160 at 855.340 kb on + strand at 855.340 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 852,008 - ABID97_RS04150 0.59 +0.8 852,410 - ABID97_RS04150 0.79 -0.6 853,159 - ABID97_RS04155 0.22 -0.9 853,159 - ABID97_RS04155 0.22 -2.0 853,159 - ABID97_RS04155 0.22 -1.2 853,173 + ABID97_RS04155 0.23 +1.3 853,173 + ABID97_RS04155 0.23 -0.2 853,174 - ABID97_RS04155 0.23 +0.2 853,174 - ABID97_RS04155 0.23 -0.5 853,287 + ABID97_RS04155 0.30 -0.8 853,456 - ABID97_RS04155 0.40 -0.1 853,572 + ABID97_RS04155 0.47 -0.5 853,573 - ABID97_RS04155 0.47 -0.8 853,677 + ABID97_RS04155 0.54 -0.5 853,677 + ABID97_RS04155 0.54 +0.0 853,953 + ABID97_RS04155 0.71 -0.7 853,995 + ABID97_RS04155 0.74 +0.1 853,995 + ABID97_RS04155 0.74 -0.7 854,492 + -0.5 854,555 + +0.9 854,555 + +1.3 854,555 + -0.4 854,555 + +0.2 854,606 + ABID97_RS04160 0.15 -0.3 854,606 + ABID97_RS04160 0.15 +0.9 854,606 + ABID97_RS04160 0.15 +0.3 854,606 + ABID97_RS04160 0.15 -0.3 854,607 - ABID97_RS04160 0.15 -0.1 854,607 - ABID97_RS04160 0.15 -0.7 854,607 - ABID97_RS04160 0.15 +0.0 854,681 + ABID97_RS04160 0.25 +0.0 854,681 + ABID97_RS04160 0.25 -0.9 854,681 + ABID97_RS04160 0.25 -0.0 854,682 - ABID97_RS04160 0.25 +0.8 854,867 + ABID97_RS04160 0.49 +1.3 854,867 + ABID97_RS04160 0.49 +0.3 854,867 + ABID97_RS04160 0.49 -0.2 854,867 + ABID97_RS04160 0.49 +1.9 854,867 + ABID97_RS04160 0.49 -0.8 854,867 + ABID97_RS04160 0.49 -0.1 854,867 + ABID97_RS04160 0.49 +0.2 854,868 - ABID97_RS04160 0.49 -0.5 854,868 - ABID97_RS04160 0.49 -0.0 854,868 - ABID97_RS04160 0.49 -0.6 854,868 - ABID97_RS04160 0.49 -0.3 854,869 - ABID97_RS04160 0.49 +0.3 854,954 + ABID97_RS04160 0.60 +0.6 854,954 + ABID97_RS04160 0.60 -0.6 855,340 + -1.7 855,340 + -0.1
Or see this region's nucleotide sequence