Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03965 and PS417_03970 are separated by 0 nucleotides PS417_03970 and PS417_03975 are separated by 11 nucleotides PS417_03975 and PS417_03980 are separated by 44 nucleotides
PS417_03965: PS417_03965 - fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components <small>(from data)</small>, at 885,528 to 888,386
_03965
PS417_03970: PS417_03970 - 1-phosphofructokinase, at 888,387 to 889,307
_03970
PS417_03975: PS417_03975 - FruA, at 889,319 to 891,028
_03975
PS417_03980: PS417_03980 - alkaline phosphatase, at 891,073 to 892,614
_03980
Position (kb) 889
890
891
892 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 888.383 kb on - strand at 888.384 kb on + strand at 888.385 kb on - strand at 888.385 kb on - strand at 888.385 kb on - strand at 888.385 kb on - strand at 889.057 kb on - strand, within PS417_03970 at 889.305 kb on + strand at 889.306 kb on - strand at 889.306 kb on - strand at 889.511 kb on - strand, within PS417_03975 at 889.625 kb on + strand, within PS417_03975 at 889.626 kb on - strand, within PS417_03975 at 889.626 kb on - strand, within PS417_03975 at 889.626 kb on - strand, within PS417_03975 at 889.663 kb on + strand, within PS417_03975 at 889.663 kb on + strand, within PS417_03975 at 889.663 kb on + strand, within PS417_03975 at 889.663 kb on + strand, within PS417_03975 at 889.663 kb on + strand, within PS417_03975 at 889.663 kb on + strand, within PS417_03975 at 889.663 kb on + strand, within PS417_03975 at 889.663 kb on + strand, within PS417_03975 at 889.664 kb on - strand, within PS417_03975 at 889.664 kb on - strand, within PS417_03975 at 889.664 kb on - strand, within PS417_03975 at 889.664 kb on - strand, within PS417_03975 at 889.664 kb on - strand, within PS417_03975 at 889.751 kb on + strand, within PS417_03975 at 889.751 kb on + strand, within PS417_03975 at 890.193 kb on - strand, within PS417_03975 at 890.201 kb on + strand, within PS417_03975 at 890.289 kb on + strand, within PS417_03975 at 890.573 kb on + strand, within PS417_03975 at 890.672 kb on - strand, within PS417_03975 at 890.846 kb on + strand, within PS417_03975 at 890.846 kb on + strand, within PS417_03975 at 890.846 kb on + strand, within PS417_03975 at 890.927 kb on + strand at 890.973 kb on - strand at 891.040 kb on - strand at 891.290 kb on + strand, within PS417_03980 at 891.559 kb on + strand, within PS417_03980 at 891.617 kb on - strand, within PS417_03980 at 891.676 kb on - strand, within PS417_03980 at 891.676 kb on - strand, within PS417_03980 at 891.733 kb on + strand, within PS417_03980 at 891.914 kb on - strand, within PS417_03980 at 891.914 kb on - strand, within PS417_03980 at 891.973 kb on + strand, within PS417_03980 at 891.974 kb on - strand, within PS417_03980
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 888,383 - +0.2 888,384 + +0.2 888,385 - +1.2 888,385 - +1.2 888,385 - -0.8 888,385 - +1.0 889,057 - PS417_03970 0.73 +0.7 889,305 + -0.3 889,306 - -0.5 889,306 - +0.5 889,511 - PS417_03975 0.11 -1.7 889,625 + PS417_03975 0.18 -1.0 889,626 - PS417_03975 0.18 +1.2 889,626 - PS417_03975 0.18 -1.1 889,626 - PS417_03975 0.18 -0.9 889,663 + PS417_03975 0.20 -1.3 889,663 + PS417_03975 0.20 -1.2 889,663 + PS417_03975 0.20 -1.7 889,663 + PS417_03975 0.20 -1.6 889,663 + PS417_03975 0.20 -0.9 889,663 + PS417_03975 0.20 -1.8 889,663 + PS417_03975 0.20 -0.8 889,663 + PS417_03975 0.20 -0.8 889,664 - PS417_03975 0.20 -1.0 889,664 - PS417_03975 0.20 -3.3 889,664 - PS417_03975 0.20 -1.0 889,664 - PS417_03975 0.20 -1.6 889,664 - PS417_03975 0.20 -0.6 889,751 + PS417_03975 0.25 -1.0 889,751 + PS417_03975 0.25 -2.4 890,193 - PS417_03975 0.51 -1.1 890,201 + PS417_03975 0.52 +0.0 890,289 + PS417_03975 0.57 -2.0 890,573 + PS417_03975 0.73 -1.4 890,672 - PS417_03975 0.79 -0.1 890,846 + PS417_03975 0.89 -0.8 890,846 + PS417_03975 0.89 -0.8 890,846 + PS417_03975 0.89 -1.3 890,927 + -0.8 890,973 - +1.2 891,040 - -0.2 891,290 + PS417_03980 0.14 -0.1 891,559 + PS417_03980 0.32 -2.4 891,617 - PS417_03980 0.35 +0.7 891,676 - PS417_03980 0.39 -0.6 891,676 - PS417_03980 0.39 -0.1 891,733 + PS417_03980 0.43 -1.1 891,914 - PS417_03980 0.55 -0.7 891,914 - PS417_03980 0.55 +0.2 891,973 + PS417_03980 0.58 +0.1 891,974 - PS417_03980 0.58 -0.1
Or see this region's nucleotide sequence