Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0468 and Echvi_0469 are separated by 117 nucleotides Echvi_0469 and Echvi_0470 are separated by 451 nucleotides
Echvi_0468: Echvi_0468 - SusD family., at 512,936 to 514,681
_0468
Echvi_0469: Echvi_0469 - TonB-linked outer membrane protein, SusC/RagA family, at 514,799 to 517,885
_0469
Echvi_0470: Echvi_0470 - beta-ketoacyl-acyl-carrier-protein synthase II, at 518,337 to 519,581
_0470
Position (kb) 514
515
516
517
518 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 513.910 kb on - strand, within Echvi_0468 at 513.928 kb on - strand, within Echvi_0468 at 513.941 kb on - strand, within Echvi_0468 at 513.944 kb on - strand, within Echvi_0468 at 513.944 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.963 kb on - strand, within Echvi_0468 at 513.997 kb on + strand, within Echvi_0468 at 513.997 kb on + strand, within Echvi_0468 at 514.002 kb on + strand, within Echvi_0468 at 514.002 kb on + strand, within Echvi_0468 at 514.003 kb on - strand, within Echvi_0468 at 514.016 kb on + strand, within Echvi_0468 at 514.062 kb on + strand, within Echvi_0468 at 514.062 kb on + strand, within Echvi_0468 at 514.063 kb on - strand, within Echvi_0468 at 514.066 kb on + strand, within Echvi_0468 at 514.066 kb on + strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.075 kb on + strand, within Echvi_0468 at 514.096 kb on + strand, within Echvi_0468 at 514.134 kb on + strand, within Echvi_0468 at 514.134 kb on + strand, within Echvi_0468 at 514.234 kb on - strand, within Echvi_0468 at 514.360 kb on + strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.501 kb on + strand, within Echvi_0468 at 514.501 kb on + strand, within Echvi_0468 at 514.502 kb on - strand, within Echvi_0468 at 514.511 kb on + strand at 514.511 kb on + strand at 514.511 kb on + strand at 514.511 kb on + strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.515 kb on + strand at 514.616 kb on - strand at 514.621 kb on + strand at 514.672 kb on + strand at 514.673 kb on - strand at 514.814 kb on - strand at 514.840 kb on + strand at 514.924 kb on - strand at 515.016 kb on + strand at 515.026 kb on + strand at 515.047 kb on - strand at 515.080 kb on + strand at 515.080 kb on + strand at 515.081 kb on - strand at 515.176 kb on + strand, within Echvi_0469 at 515.176 kb on + strand, within Echvi_0469 at 515.176 kb on + strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.187 kb on + strand, within Echvi_0469 at 515.188 kb on - strand, within Echvi_0469 at 515.188 kb on - strand, within Echvi_0469 at 515.194 kb on + strand, within Echvi_0469 at 515.241 kb on + strand, within Echvi_0469 at 515.245 kb on + strand, within Echvi_0469 at 515.254 kb on + strand, within Echvi_0469 at 515.265 kb on + strand, within Echvi_0469 at 515.265 kb on + strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.369 kb on - strand, within Echvi_0469 at 515.369 kb on - strand, within Echvi_0469 at 515.386 kb on + strand, within Echvi_0469 at 515.388 kb on + strand, within Echvi_0469 at 515.388 kb on + strand, within Echvi_0469 at 515.389 kb on - strand, within Echvi_0469 at 515.389 kb on - strand, within Echvi_0469 at 515.418 kb on + strand, within Echvi_0469 at 515.482 kb on - strand, within Echvi_0469 at 515.496 kb on - strand, within Echvi_0469 at 515.504 kb on - strand, within Echvi_0469 at 515.536 kb on - strand, within Echvi_0469 at 515.697 kb on + strand, within Echvi_0469 at 515.698 kb on - strand, within Echvi_0469 at 515.698 kb on - strand, within Echvi_0469 at 515.860 kb on + strand, within Echvi_0469 at 515.861 kb on - strand, within Echvi_0469 at 515.975 kb on - strand, within Echvi_0469 at 516.011 kb on - strand, within Echvi_0469 at 516.011 kb on - strand, within Echvi_0469 at 516.052 kb on + strand, within Echvi_0469 at 516.053 kb on - strand, within Echvi_0469 at 516.095 kb on - strand, within Echvi_0469 at 516.108 kb on + strand, within Echvi_0469 at 516.185 kb on - strand, within Echvi_0469 at 516.203 kb on - strand, within Echvi_0469 at 516.232 kb on + strand, within Echvi_0469 at 516.319 kb on + strand, within Echvi_0469 at 516.320 kb on - strand, within Echvi_0469 at 516.327 kb on + strand, within Echvi_0469 at 516.331 kb on + strand, within Echvi_0469 at 516.332 kb on - strand, within Echvi_0469 at 516.343 kb on - strand, within Echvi_0469 at 516.343 kb on - strand, within Echvi_0469 at 516.346 kb on + strand, within Echvi_0469 at 516.346 kb on + strand, within Echvi_0469 at 516.347 kb on - strand, within Echvi_0469 at 516.367 kb on + strand, within Echvi_0469 at 516.438 kb on + strand, within Echvi_0469 at 516.438 kb on + strand, within Echvi_0469 at 516.439 kb on - strand, within Echvi_0469 at 516.447 kb on + strand, within Echvi_0469 at 516.480 kb on - strand, within Echvi_0469 at 516.480 kb on - strand, within Echvi_0469 at 516.497 kb on - strand, within Echvi_0469 at 516.498 kb on + strand, within Echvi_0469 at 516.498 kb on + strand, within Echvi_0469 at 516.499 kb on - strand, within Echvi_0469 at 516.503 kb on - strand, within Echvi_0469 at 516.533 kb on + strand, within Echvi_0469 at 516.533 kb on + strand, within Echvi_0469 at 516.534 kb on - strand, within Echvi_0469 at 516.534 kb on - strand, within Echvi_0469 at 516.534 kb on - strand, within Echvi_0469 at 516.534 kb on - strand, within Echvi_0469 at 516.611 kb on - strand, within Echvi_0469 at 516.611 kb on - strand, within Echvi_0469 at 516.637 kb on + strand, within Echvi_0469 at 516.713 kb on - strand, within Echvi_0469 at 516.730 kb on + strand, within Echvi_0469 at 516.730 kb on + strand, within Echvi_0469 at 516.733 kb on - strand, within Echvi_0469 at 516.941 kb on - strand, within Echvi_0469 at 517.017 kb on - strand, within Echvi_0469 at 517.021 kb on + strand, within Echvi_0469 at 517.081 kb on + strand, within Echvi_0469 at 517.168 kb on + strand, within Echvi_0469 at 517.198 kb on + strand, within Echvi_0469 at 517.253 kb on + strand, within Echvi_0469 at 517.253 kb on + strand, within Echvi_0469 at 517.253 kb on + strand, within Echvi_0469 at 517.254 kb on - strand, within Echvi_0469 at 517.257 kb on + strand, within Echvi_0469 at 517.257 kb on + strand, within Echvi_0469 at 517.257 kb on + strand, within Echvi_0469 at 517.257 kb on + strand, within Echvi_0469 at 517.257 kb on + strand, within Echvi_0469 at 517.257 kb on + strand, within Echvi_0469 at 517.257 kb on + strand, within Echvi_0469 at 517.258 kb on - strand, within Echvi_0469 at 517.258 kb on - strand, within Echvi_0469 at 517.258 kb on - strand, within Echvi_0469 at 517.258 kb on - strand, within Echvi_0469 at 517.259 kb on + strand, within Echvi_0469 at 517.260 kb on - strand, within Echvi_0469 at 517.342 kb on + strand, within Echvi_0469 at 517.350 kb on - strand, within Echvi_0469 at 517.370 kb on + strand, within Echvi_0469 at 517.387 kb on + strand, within Echvi_0469 at 517.387 kb on + strand, within Echvi_0469 at 517.387 kb on + strand, within Echvi_0469 at 517.405 kb on + strand, within Echvi_0469 at 517.442 kb on - strand, within Echvi_0469 at 517.520 kb on - strand, within Echvi_0469 at 517.523 kb on + strand, within Echvi_0469 at 517.523 kb on + strand, within Echvi_0469 at 517.524 kb on - strand, within Echvi_0469 at 517.625 kb on + strand at 517.708 kb on + strand at 517.708 kb on + strand at 517.709 kb on - strand at 517.753 kb on + strand at 517.754 kb on - strand at 517.852 kb on - strand at 517.852 kb on - strand at 517.885 kb on + strand at 517.944 kb on + strand at 517.945 kb on - strand at 517.945 kb on - strand at 517.961 kb on - strand at 517.967 kb on + strand at 517.967 kb on + strand at 517.968 kb on - strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.970 kb on - strand at 517.985 kb on + strand at 517.986 kb on - strand at 517.991 kb on + strand at 517.991 kb on + strand at 517.992 kb on - strand at 517.992 kb on - strand at 517.996 kb on + strand at 518.004 kb on + strand at 518.004 kb on + strand at 518.005 kb on - strand at 518.011 kb on + strand at 518.012 kb on - strand at 518.041 kb on + strand at 518.059 kb on + strand at 518.101 kb on - strand at 518.162 kb on + strand at 518.192 kb on + strand at 518.193 kb on - strand at 518.215 kb on + strand at 518.215 kb on + strand at 518.215 kb on + strand at 518.216 kb on - strand at 518.281 kb on - strand at 518.326 kb on - strand at 518.326 kb on - strand at 518.326 kb on - strand at 518.339 kb on - strand at 518.348 kb on - strand at 518.372 kb on + strand at 518.373 kb on - strand at 518.373 kb on - strand at 518.412 kb on + strand at 518.459 kb on + strand at 518.460 kb on - strand at 518.480 kb on + strand, within Echvi_0470 at 518.486 kb on + strand, within Echvi_0470 at 518.487 kb on - strand, within Echvi_0470 at 518.522 kb on + strand, within Echvi_0470 at 518.525 kb on + strand, within Echvi_0470 at 518.525 kb on + strand, within Echvi_0470 at 518.604 kb on - strand, within Echvi_0470 at 518.622 kb on - strand, within Echvi_0470 at 518.669 kb on + strand, within Echvi_0470 at 518.670 kb on - strand, within Echvi_0470 at 518.678 kb on + strand, within Echvi_0470 at 518.678 kb on + strand, within Echvi_0470 at 518.685 kb on - strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.687 kb on - strand, within Echvi_0470 at 518.743 kb on + strand, within Echvi_0470 at 518.743 kb on + strand, within Echvi_0470 at 518.744 kb on - strand, within Echvi_0470 at 518.744 kb on - strand, within Echvi_0470 at 518.744 kb on - strand, within Echvi_0470 at 518.782 kb on + strand, within Echvi_0470 at 518.811 kb on + strand, within Echvi_0470
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 513,910 - Echvi_0468 0.56 +1.1 513,928 - Echvi_0468 0.57 +1.0 513,941 - Echvi_0468 0.58 -0.8 513,944 - Echvi_0468 0.58 -0.6 513,944 - Echvi_0468 0.58 -0.5 513,953 - Echvi_0468 0.58 -0.3 513,953 - Echvi_0468 0.58 +0.4 513,953 - Echvi_0468 0.58 -0.5 513,963 - Echvi_0468 0.59 +0.3 513,997 + Echvi_0468 0.61 -0.1 513,997 + Echvi_0468 0.61 +0.4 514,002 + Echvi_0468 0.61 -1.3 514,002 + Echvi_0468 0.61 -1.1 514,003 - Echvi_0468 0.61 +0.2 514,016 + Echvi_0468 0.62 +0.5 514,062 + Echvi_0468 0.64 +0.0 514,062 + Echvi_0468 0.64 -0.3 514,063 - Echvi_0468 0.65 -0.3 514,066 + Echvi_0468 0.65 +0.7 514,066 + Echvi_0468 0.65 -0.6 514,067 - Echvi_0468 0.65 -2.7 514,067 - Echvi_0468 0.65 +1.7 514,067 - Echvi_0468 0.65 +0.3 514,075 + Echvi_0468 0.65 -0.7 514,096 + Echvi_0468 0.66 -1.8 514,134 + Echvi_0468 0.69 +1.3 514,134 + Echvi_0468 0.69 -1.1 514,234 - Echvi_0468 0.74 -1.6 514,360 + Echvi_0468 0.82 -0.7 514,361 - Echvi_0468 0.82 -2.0 514,361 - Echvi_0468 0.82 -0.5 514,361 - Echvi_0468 0.82 -0.4 514,361 - Echvi_0468 0.82 -0.3 514,501 + Echvi_0468 0.90 +0.6 514,501 + Echvi_0468 0.90 -1.6 514,502 - Echvi_0468 0.90 +2.0 514,511 + +1.8 514,511 + -0.6 514,511 + -1.0 514,511 + -1.2 514,512 - -3.1 514,512 - -0.6 514,512 - -1.5 514,512 - +0.1 514,515 + +0.2 514,616 - -0.4 514,621 + +2.3 514,672 + -0.4 514,673 - +0.3 514,814 - -0.6 514,840 + +0.5 514,924 - +0.3 515,016 + -0.1 515,026 + -0.1 515,047 - -0.3 515,080 + -1.5 515,080 + +0.0 515,081 - +1.3 515,176 + Echvi_0469 0.12 +1.7 515,176 + Echvi_0469 0.12 -0.9 515,176 + Echvi_0469 0.12 -0.7 515,177 - Echvi_0469 0.12 -0.9 515,177 - Echvi_0469 0.12 +0.4 515,177 - Echvi_0469 0.12 +1.0 515,187 + Echvi_0469 0.13 -0.9 515,188 - Echvi_0469 0.13 +1.5 515,188 - Echvi_0469 0.13 +0.1 515,194 + Echvi_0469 0.13 -0.5 515,241 + Echvi_0469 0.14 +0.7 515,245 + Echvi_0469 0.14 -2.1 515,254 + Echvi_0469 0.15 +0.6 515,265 + Echvi_0469 0.15 -1.8 515,265 + Echvi_0469 0.15 +0.5 515,266 - Echvi_0469 0.15 -1.8 515,266 - Echvi_0469 0.15 -1.2 515,266 - Echvi_0469 0.15 -0.9 515,266 - Echvi_0469 0.15 -0.3 515,369 - Echvi_0469 0.18 -0.9 515,369 - Echvi_0469 0.18 -0.8 515,386 + Echvi_0469 0.19 -0.2 515,388 + Echvi_0469 0.19 -1.4 515,388 + Echvi_0469 0.19 -0.2 515,389 - Echvi_0469 0.19 -0.5 515,389 - Echvi_0469 0.19 +0.1 515,418 + Echvi_0469 0.20 -0.9 515,482 - Echvi_0469 0.22 -0.9 515,496 - Echvi_0469 0.23 -0.8 515,504 - Echvi_0469 0.23 -0.9 515,536 - Echvi_0469 0.24 +0.2 515,697 + Echvi_0469 0.29 +0.2 515,698 - Echvi_0469 0.29 -0.8 515,698 - Echvi_0469 0.29 +0.6 515,860 + Echvi_0469 0.34 +2.0 515,861 - Echvi_0469 0.34 +0.4 515,975 - Echvi_0469 0.38 +0.1 516,011 - Echvi_0469 0.39 -0.3 516,011 - Echvi_0469 0.39 +1.1 516,052 + Echvi_0469 0.41 -0.9 516,053 - Echvi_0469 0.41 -0.1 516,095 - Echvi_0469 0.42 +0.3 516,108 + Echvi_0469 0.42 +0.1 516,185 - Echvi_0469 0.45 +0.4 516,203 - Echvi_0469 0.45 +0.3 516,232 + Echvi_0469 0.46 -0.1 516,319 + Echvi_0469 0.49 -1.6 516,320 - Echvi_0469 0.49 -0.0 516,327 + Echvi_0469 0.49 +0.1 516,331 + Echvi_0469 0.50 +0.2 516,332 - Echvi_0469 0.50 +0.9 516,343 - Echvi_0469 0.50 -2.2 516,343 - Echvi_0469 0.50 +0.5 516,346 + Echvi_0469 0.50 -0.1 516,346 + Echvi_0469 0.50 -0.6 516,347 - Echvi_0469 0.50 -0.9 516,367 + Echvi_0469 0.51 -0.2 516,438 + Echvi_0469 0.53 -0.8 516,438 + Echvi_0469 0.53 +0.7 516,439 - Echvi_0469 0.53 -0.6 516,447 + Echvi_0469 0.53 -0.0 516,480 - Echvi_0469 0.54 -1.8 516,480 - Echvi_0469 0.54 -0.2 516,497 - Echvi_0469 0.55 -0.7 516,498 + Echvi_0469 0.55 -1.8 516,498 + Echvi_0469 0.55 -0.3 516,499 - Echvi_0469 0.55 +1.0 516,503 - Echvi_0469 0.55 +0.1 516,533 + Echvi_0469 0.56 -0.8 516,533 + Echvi_0469 0.56 -0.0 516,534 - Echvi_0469 0.56 +0.5 516,534 - Echvi_0469 0.56 -0.8 516,534 - Echvi_0469 0.56 -0.1 516,534 - Echvi_0469 0.56 -0.4 516,611 - Echvi_0469 0.59 -0.9 516,611 - Echvi_0469 0.59 +0.6 516,637 + Echvi_0469 0.60 -0.8 516,713 - Echvi_0469 0.62 +2.3 516,730 + Echvi_0469 0.63 +0.2 516,730 + Echvi_0469 0.63 -0.6 516,733 - Echvi_0469 0.63 -0.2 516,941 - Echvi_0469 0.69 +0.6 517,017 - Echvi_0469 0.72 -0.0 517,021 + Echvi_0469 0.72 +0.2 517,081 + Echvi_0469 0.74 -0.9 517,168 + Echvi_0469 0.77 -0.5 517,198 + Echvi_0469 0.78 -0.2 517,253 + Echvi_0469 0.79 -0.9 517,253 + Echvi_0469 0.79 -0.9 517,253 + Echvi_0469 0.79 +0.1 517,254 - Echvi_0469 0.80 +1.0 517,257 + Echvi_0469 0.80 +0.2 517,257 + Echvi_0469 0.80 +0.2 517,257 + Echvi_0469 0.80 -1.1 517,257 + Echvi_0469 0.80 +0.1 517,257 + Echvi_0469 0.80 +1.1 517,257 + Echvi_0469 0.80 -0.3 517,257 + Echvi_0469 0.80 -0.2 517,258 - Echvi_0469 0.80 -0.2 517,258 - Echvi_0469 0.80 -0.0 517,258 - Echvi_0469 0.80 -0.1 517,258 - Echvi_0469 0.80 -0.9 517,259 + Echvi_0469 0.80 +0.9 517,260 - Echvi_0469 0.80 -0.8 517,342 + Echvi_0469 0.82 +1.3 517,350 - Echvi_0469 0.83 -1.5 517,370 + Echvi_0469 0.83 -0.0 517,387 + Echvi_0469 0.84 -0.0 517,387 + Echvi_0469 0.84 -1.0 517,387 + Echvi_0469 0.84 +0.3 517,405 + Echvi_0469 0.84 -0.9 517,442 - Echvi_0469 0.86 -2.0 517,520 - Echvi_0469 0.88 +0.8 517,523 + Echvi_0469 0.88 +0.5 517,523 + Echvi_0469 0.88 +0.2 517,524 - Echvi_0469 0.88 -0.8 517,625 + -0.5 517,708 + +0.7 517,708 + +0.5 517,709 - -0.3 517,753 + +1.7 517,754 - -0.6 517,852 - +0.8 517,852 - +1.0 517,885 + +0.7 517,944 + -1.2 517,945 - -1.8 517,945 - -0.7 517,961 - +0.8 517,967 + +1.3 517,967 + +0.4 517,968 - +1.2 517,969 + +0.7 517,969 + +0.7 517,969 + -0.3 517,969 + -0.2 517,969 + -0.2 517,969 + +1.7 517,970 - -1.6 517,985 + -1.5 517,986 - -0.4 517,991 + +0.5 517,991 + -0.5 517,992 - -0.2 517,992 - -2.0 517,996 + -0.9 518,004 + +0.4 518,004 + +0.8 518,005 - -1.5 518,011 + +0.7 518,012 - +0.2 518,041 + -1.4 518,059 + +1.0 518,101 - -0.6 518,162 + -1.5 518,192 + +0.3 518,193 - +0.5 518,215 + -0.4 518,215 + -2.1 518,215 + -0.3 518,216 - +1.2 518,281 - +0.9 518,326 - +0.6 518,326 - -0.1 518,326 - +0.4 518,339 - -0.4 518,348 - -0.3 518,372 + +1.0 518,373 - -0.8 518,373 - +0.1 518,412 + -0.4 518,459 + +0.7 518,460 - +0.9 518,480 + Echvi_0470 0.11 +0.6 518,486 + Echvi_0470 0.12 +0.1 518,487 - Echvi_0470 0.12 +0.7 518,522 + Echvi_0470 0.15 +0.1 518,525 + Echvi_0470 0.15 -2.8 518,525 + Echvi_0470 0.15 +0.9 518,604 - Echvi_0470 0.21 +0.2 518,622 - Echvi_0470 0.23 -1.0 518,669 + Echvi_0470 0.27 -1.1 518,670 - Echvi_0470 0.27 -0.3 518,678 + Echvi_0470 0.27 +0.2 518,678 + Echvi_0470 0.27 -2.5 518,685 - Echvi_0470 0.28 +0.5 518,686 + Echvi_0470 0.28 +0.1 518,686 + Echvi_0470 0.28 -2.7 518,686 + Echvi_0470 0.28 +2.1 518,686 + Echvi_0470 0.28 -0.8 518,686 + Echvi_0470 0.28 +0.0 518,687 - Echvi_0470 0.28 -1.3 518,743 + Echvi_0470 0.33 +0.4 518,743 + Echvi_0470 0.33 -0.7 518,744 - Echvi_0470 0.33 +1.0 518,744 - Echvi_0470 0.33 +1.0 518,744 - Echvi_0470 0.33 -0.1 518,782 + Echvi_0470 0.36 -0.6 518,811 + Echvi_0470 0.38 -1.1
Or see this region's nucleotide sequence