Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_13800
Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,225,222 | - | -1.8 | |||
| 3,225,290 | + | -0.8 | |||
| 3,225,892 | + | CA264_13800 | 0.85 | -0.7 | |
| 3,225,896 | + | CA264_13800 | 0.85 | -1.3 | |
| 3,225,933 | - | +0.3 | |||
| 3,226,098 | + | +0.1 | |||
| 3,226,098 | + | +0.5 | |||
| 3,226,134 | + | -1.3 | |||
| 3,226,134 | + | +0.7 | |||
| 3,226,163 | + | +2.7 | |||
| 3,226,163 | + | +0.6 | |||
| 3,226,164 | - | +0.2 | |||
| 3,226,186 | + | +0.6 | |||
| 3,226,187 | - | -0.9 | |||
| 3,226,230 | - | -1.6 | |||
| 3,226,305 | - | -0.4 | |||
| 3,226,431 | + | CA264_13805 | 0.12 | -0.6 | |
| 3,226,577 | - | CA264_13805 | 0.19 | +1.7 | |
| 3,226,639 | + | CA264_13805 | 0.23 | +2.3 | |
| 3,226,640 | - | CA264_13805 | 0.23 | -1.3 | |
| 3,226,729 | + | CA264_13805 | 0.27 | -3.7 | |
| 3,226,729 | + | CA264_13805 | 0.27 | -0.7 | |
| 3,226,760 | - | CA264_13805 | 0.29 | -0.3 | |
| 3,226,762 | - | CA264_13805 | 0.29 | -0.3 | |
| 3,226,762 | - | CA264_13805 | 0.29 | -1.4 | |
| 3,226,766 | + | CA264_13805 | 0.29 | +0.7 | |
| 3,226,766 | + | CA264_13805 | 0.29 | +1.2 |
Or see this region's nucleotide sequence