Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11110 and CA264_11115 are separated by 45 nucleotides CA264_11115 and CA264_11120 are separated by 48 nucleotides CA264_11120 and CA264_11125 are separated by 266 nucleotides
CA264_11110: CA264_11110 - SNase-like nuclease, at 2,565,635 to 2,566,471
_11110
CA264_11115: CA264_11115 - hypothetical protein, at 2,566,517 to 2,566,942
_11115
CA264_11120: CA264_11120 - universal stress protein UspA, at 2,566,991 to 2,567,845
_11120
CA264_11125: CA264_11125 - bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase, at 2,568,112 to 2,570,328
_11125
Position (kb)
2566
2567
2568 Strain fitness (log2 ratio)
-2
-1
0
1 at 2565.999 kb on + strand, within CA264_11110 at 2566.148 kb on - strand, within CA264_11110 at 2566.323 kb on - strand, within CA264_11110 at 2566.353 kb on - strand, within CA264_11110 at 2566.353 kb on - strand, within CA264_11110 at 2566.359 kb on + strand, within CA264_11110 at 2566.360 kb on - strand, within CA264_11110 at 2566.483 kb on + strand at 2566.484 kb on - strand at 2566.511 kb on - strand at 2566.511 kb on - strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.515 kb on - strand at 2566.515 kb on - strand at 2566.517 kb on - strand at 2566.536 kb on + strand at 2566.537 kb on - strand at 2566.671 kb on + strand, within CA264_11115 at 2566.672 kb on - strand, within CA264_11115 at 2566.766 kb on - strand, within CA264_11115 at 2566.813 kb on + strand, within CA264_11115 at 2566.868 kb on + strand, within CA264_11115 at 2566.896 kb on + strand, within CA264_11115 at 2566.897 kb on - strand, within CA264_11115 at 2566.897 kb on - strand, within CA264_11115 at 2566.903 kb on + strand at 2566.904 kb on - strand at 2566.932 kb on + strand at 2566.933 kb on - strand at 2566.941 kb on - strand at 2566.992 kb on + strand at 2567.038 kb on - strand at 2567.066 kb on - strand at 2567.124 kb on - strand, within CA264_11120 at 2567.144 kb on + strand, within CA264_11120 at 2567.352 kb on + strand, within CA264_11120 at 2567.353 kb on - strand, within CA264_11120 at 2567.353 kb on - strand, within CA264_11120 at 2567.517 kb on + strand, within CA264_11120 at 2567.571 kb on - strand, within CA264_11120 at 2567.571 kb on - strand, within CA264_11120 at 2567.578 kb on - strand, within CA264_11120 at 2567.633 kb on - strand, within CA264_11120 at 2567.778 kb on + strand at 2567.778 kb on + strand at 2567.778 kb on + strand at 2567.779 kb on - strand at 2567.787 kb on + strand at 2567.788 kb on - strand at 2567.832 kb on - strand at 2567.885 kb on + strand at 2567.886 kb on - strand at 2567.887 kb on + strand at 2567.898 kb on + strand at 2567.899 kb on - strand at 2567.901 kb on + strand at 2567.902 kb on - strand at 2567.905 kb on + strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.918 kb on - strand at 2568.045 kb on + strand at 2568.054 kb on + strand at 2568.098 kb on + strand at 2568.100 kb on + strand at 2568.203 kb on - strand at 2568.209 kb on + strand at 2568.241 kb on + strand at 2568.246 kb on + strand at 2568.249 kb on - strand at 2568.271 kb on - strand at 2568.403 kb on + strand, within CA264_11125 at 2568.404 kb on - strand, within CA264_11125 at 2568.404 kb on - strand, within CA264_11125 at 2568.423 kb on + strand, within CA264_11125 at 2568.424 kb on - strand, within CA264_11125 at 2568.532 kb on - strand, within CA264_11125 at 2568.532 kb on - strand, within CA264_11125 at 2568.742 kb on - strand, within CA264_11125
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 2,565,999 + CA264_11110 0.43 -1.6 2,566,148 - CA264_11110 0.61 +0.6 2,566,323 - CA264_11110 0.82 +0.5 2,566,353 - CA264_11110 0.86 -0.2 2,566,353 - CA264_11110 0.86 +1.0 2,566,359 + CA264_11110 0.86 -2.0 2,566,360 - CA264_11110 0.87 -0.6 2,566,483 + +0.1 2,566,484 - +0.0 2,566,511 - -1.1 2,566,511 - -0.4 2,566,514 + +0.5 2,566,514 + +0.1 2,566,514 + -0.1 2,566,514 + -0.2 2,566,515 - +1.0 2,566,515 - -1.5 2,566,517 - -0.2 2,566,536 + -0.2 2,566,537 - -0.6 2,566,671 + CA264_11115 0.36 -0.7 2,566,672 - CA264_11115 0.36 -0.4 2,566,766 - CA264_11115 0.58 -0.3 2,566,813 + CA264_11115 0.69 +0.2 2,566,868 + CA264_11115 0.82 +1.3 2,566,896 + CA264_11115 0.89 -0.8 2,566,897 - CA264_11115 0.89 -0.6 2,566,897 - CA264_11115 0.89 -0.9 2,566,903 + -0.4 2,566,904 - -0.3 2,566,932 + +0.6 2,566,933 - +0.5 2,566,941 - -0.1 2,566,992 + +0.9 2,567,038 - +0.8 2,567,066 - +0.8 2,567,124 - CA264_11120 0.16 -0.2 2,567,144 + CA264_11120 0.18 +0.6 2,567,352 + CA264_11120 0.42 +0.2 2,567,353 - CA264_11120 0.42 -0.2 2,567,353 - CA264_11120 0.42 -0.0 2,567,517 + CA264_11120 0.62 -1.7 2,567,571 - CA264_11120 0.68 -2.0 2,567,571 - CA264_11120 0.68 +0.2 2,567,578 - CA264_11120 0.69 -0.6 2,567,633 - CA264_11120 0.75 -0.0 2,567,778 + +0.2 2,567,778 + -0.0 2,567,778 + +0.6 2,567,779 - +0.2 2,567,787 + -0.5 2,567,788 - +1.5 2,567,832 - -0.4 2,567,885 + -0.9 2,567,886 - -0.3 2,567,887 + -0.1 2,567,898 + -0.0 2,567,899 - -0.1 2,567,901 + -1.7 2,567,902 - -0.9 2,567,905 + +0.3 2,567,906 - -1.2 2,567,906 - -0.3 2,567,906 - -0.4 2,567,906 - -0.5 2,567,918 - -0.1 2,568,045 + +0.6 2,568,054 + -0.4 2,568,098 + +0.9 2,568,100 + -0.3 2,568,203 - +0.1 2,568,209 + -0.2 2,568,241 + -0.3 2,568,246 + -0.4 2,568,249 - +0.1 2,568,271 - +0.1 2,568,403 + CA264_11125 0.13 -0.1 2,568,404 - CA264_11125 0.13 -0.6 2,568,404 - CA264_11125 0.13 -0.4 2,568,423 + CA264_11125 0.14 -0.1 2,568,424 - CA264_11125 0.14 -0.4 2,568,532 - CA264_11125 0.19 +1.0 2,568,532 - CA264_11125 0.19 -0.7 2,568,742 - CA264_11125 0.28 +0.9
Or see this region's nucleotide sequence