Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09395 and CA264_09400 are separated by 71 nucleotides CA264_09400 and CA264_09405 are separated by 88 nucleotides CA264_09405 and CA264_09410 are separated by 280 nucleotides
CA264_09395: CA264_09395 - hypothetical protein, at 2,196,749 to 2,197,372
_09395
CA264_09400: CA264_09400 - hypothetical protein, at 2,197,444 to 2,197,671
_09400
CA264_09405: CA264_09405 - hypothetical protein, at 2,197,760 to 2,197,993
_09405
CA264_09410: CA264_09410 - recombinase RecQ, at 2,198,274 to 2,200,187
_09410
Position (kb)
2197
2198 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2196.825 kb on + strand, within CA264_09395 at 2196.826 kb on - strand, within CA264_09395 at 2196.946 kb on - strand, within CA264_09395 at 2197.036 kb on + strand, within CA264_09395 at 2197.056 kb on + strand, within CA264_09395 at 2197.127 kb on + strand, within CA264_09395 at 2197.129 kb on + strand, within CA264_09395 at 2197.129 kb on + strand, within CA264_09395 at 2197.129 kb on + strand, within CA264_09395 at 2197.130 kb on - strand, within CA264_09395 at 2197.213 kb on + strand, within CA264_09395 at 2197.337 kb on - strand at 2197.367 kb on + strand at 2197.367 kb on + strand at 2197.372 kb on + strand at 2197.372 kb on + strand at 2197.373 kb on - strand at 2197.373 kb on - strand at 2197.444 kb on - strand at 2197.512 kb on - strand, within CA264_09400 at 2197.519 kb on + strand, within CA264_09400 at 2197.519 kb on + strand, within CA264_09400 at 2197.520 kb on - strand, within CA264_09400 at 2197.520 kb on - strand, within CA264_09400 at 2197.575 kb on + strand, within CA264_09400 at 2197.575 kb on + strand, within CA264_09400 at 2197.576 kb on - strand, within CA264_09400 at 2197.642 kb on + strand, within CA264_09400 at 2197.734 kb on + strand at 2197.734 kb on + strand at 2197.738 kb on + strand at 2197.739 kb on - strand at 2197.745 kb on - strand at 2197.755 kb on + strand at 2197.755 kb on + strand at 2197.777 kb on - strand at 2197.842 kb on + strand, within CA264_09405 at 2197.842 kb on + strand, within CA264_09405 at 2197.842 kb on + strand, within CA264_09405 at 2197.842 kb on + strand, within CA264_09405 at 2197.897 kb on + strand, within CA264_09405 at 2197.912 kb on + strand, within CA264_09405 at 2197.913 kb on - strand, within CA264_09405 at 2197.914 kb on + strand, within CA264_09405 at 2197.914 kb on + strand, within CA264_09405 at 2197.947 kb on + strand, within CA264_09405 at 2197.948 kb on - strand, within CA264_09405 at 2197.991 kb on + strand at 2197.991 kb on + strand at 2198.018 kb on - strand at 2198.019 kb on + strand at 2198.020 kb on - strand at 2198.095 kb on + strand at 2198.096 kb on - strand at 2198.112 kb on + strand at 2198.272 kb on + strand at 2198.312 kb on + strand at 2198.312 kb on + strand at 2198.313 kb on - strand at 2198.404 kb on + strand at 2198.404 kb on + strand at 2198.404 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 2,196,825 + CA264_09395 0.12 +2.2 2,196,826 - CA264_09395 0.12 -0.4 2,196,946 - CA264_09395 0.32 -0.8 2,197,036 + CA264_09395 0.46 +0.1 2,197,056 + CA264_09395 0.49 +0.1 2,197,127 + CA264_09395 0.61 -1.7 2,197,129 + CA264_09395 0.61 -0.2 2,197,129 + CA264_09395 0.61 -1.2 2,197,129 + CA264_09395 0.61 -0.5 2,197,130 - CA264_09395 0.61 +0.0 2,197,213 + CA264_09395 0.74 -3.0 2,197,337 - -1.0 2,197,367 + -1.0 2,197,367 + +0.4 2,197,372 + -1.0 2,197,372 + +0.2 2,197,373 - -0.7 2,197,373 - +0.3 2,197,444 - +1.0 2,197,512 - CA264_09400 0.30 -1.9 2,197,519 + CA264_09400 0.33 -1.4 2,197,519 + CA264_09400 0.33 -0.8 2,197,520 - CA264_09400 0.33 -0.0 2,197,520 - CA264_09400 0.33 +0.0 2,197,575 + CA264_09400 0.57 +0.1 2,197,575 + CA264_09400 0.57 +0.4 2,197,576 - CA264_09400 0.58 -0.2 2,197,642 + CA264_09400 0.87 +0.3 2,197,734 + +0.3 2,197,734 + -0.2 2,197,738 + -0.8 2,197,739 - +0.0 2,197,745 - -1.0 2,197,755 + +1.0 2,197,755 + -0.6 2,197,777 - +0.0 2,197,842 + CA264_09405 0.35 +0.8 2,197,842 + CA264_09405 0.35 -0.6 2,197,842 + CA264_09405 0.35 -0.6 2,197,842 + CA264_09405 0.35 +0.4 2,197,897 + CA264_09405 0.59 -0.1 2,197,912 + CA264_09405 0.65 +0.2 2,197,913 - CA264_09405 0.65 +1.0 2,197,914 + CA264_09405 0.66 -0.0 2,197,914 + CA264_09405 0.66 +0.6 2,197,947 + CA264_09405 0.80 +0.6 2,197,948 - CA264_09405 0.80 -2.0 2,197,991 + +0.4 2,197,991 + -1.1 2,198,018 - -0.4 2,198,019 + +0.2 2,198,020 - +0.0 2,198,095 + -0.4 2,198,096 - +0.6 2,198,112 + +0.5 2,198,272 + +0.1 2,198,312 + +0.6 2,198,312 + +1.2 2,198,313 - +2.2 2,198,404 + +0.1 2,198,404 + -0.4 2,198,404 + -1.7
Or see this region's nucleotide sequence