Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09125 and CA264_09130 are separated by 205 nucleotides CA264_09130 and CA264_09135 are separated by 228 nucleotides
CA264_09125: CA264_09125 - glucose/galactose MFS transporter, at 2,137,037 to 2,138,455
_09125
CA264_09130: CA264_09130 - hypothetical protein, at 2,138,661 to 2,140,955
_09130
CA264_09135: CA264_09135 - peptidase S8 and S53 subtilisin kexin sedolisin, at 2,141,184 to 2,142,713
_09135
Position (kb)
2138
2139
2140
2141 Strain fitness (log2 ratio)
-1
0
1
2 at 2137.684 kb on + strand, within CA264_09125 at 2137.780 kb on + strand, within CA264_09125 at 2137.780 kb on + strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.970 kb on + strand, within CA264_09125 at 2137.970 kb on + strand, within CA264_09125 at 2138.012 kb on - strand, within CA264_09125 at 2138.030 kb on - strand, within CA264_09125 at 2138.080 kb on - strand, within CA264_09125 at 2138.080 kb on - strand, within CA264_09125 at 2138.099 kb on - strand, within CA264_09125 at 2138.155 kb on + strand, within CA264_09125 at 2138.317 kb on + strand at 2138.318 kb on - strand at 2138.402 kb on + strand at 2138.402 kb on + strand at 2138.407 kb on + strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.411 kb on + strand at 2138.412 kb on - strand at 2138.412 kb on - strand at 2138.412 kb on - strand at 2138.415 kb on - strand at 2138.453 kb on + strand at 2138.453 kb on + strand at 2138.465 kb on + strand at 2138.543 kb on + strand at 2138.544 kb on - strand at 2138.601 kb on + strand at 2138.602 kb on - strand at 2138.602 kb on - strand at 2138.676 kb on + strand at 2138.677 kb on - strand at 2138.677 kb on - strand at 2138.706 kb on - strand at 2138.850 kb on + strand at 2138.850 kb on + strand at 2138.851 kb on - strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.853 kb on - strand at 2138.867 kb on + strand at 2138.867 kb on + strand at 2138.868 kb on - strand at 2138.868 kb on - strand at 2138.892 kb on + strand, within CA264_09130 at 2138.893 kb on - strand, within CA264_09130 at 2138.904 kb on + strand, within CA264_09130 at 2138.930 kb on - strand, within CA264_09130 at 2139.006 kb on + strand, within CA264_09130 at 2139.006 kb on + strand, within CA264_09130 at 2139.007 kb on - strand, within CA264_09130 at 2139.007 kb on - strand, within CA264_09130 at 2139.009 kb on + strand, within CA264_09130 at 2139.010 kb on - strand, within CA264_09130 at 2139.183 kb on - strand, within CA264_09130 at 2139.271 kb on + strand, within CA264_09130 at 2139.296 kb on - strand, within CA264_09130 at 2139.403 kb on + strand, within CA264_09130 at 2139.404 kb on - strand, within CA264_09130 at 2139.877 kb on + strand, within CA264_09130 at 2139.878 kb on - strand, within CA264_09130 at 2139.907 kb on + strand, within CA264_09130 at 2139.908 kb on - strand, within CA264_09130 at 2139.920 kb on - strand, within CA264_09130 at 2139.920 kb on - strand, within CA264_09130 at 2139.925 kb on - strand, within CA264_09130 at 2139.960 kb on + strand, within CA264_09130 at 2139.961 kb on - strand, within CA264_09130 at 2139.961 kb on - strand, within CA264_09130 at 2139.961 kb on - strand, within CA264_09130 at 2139.961 kb on - strand, within CA264_09130 at 2140.053 kb on + strand, within CA264_09130 at 2140.053 kb on + strand, within CA264_09130 at 2140.054 kb on - strand, within CA264_09130 at 2140.101 kb on + strand, within CA264_09130 at 2140.102 kb on - strand, within CA264_09130 at 2140.103 kb on + strand, within CA264_09130 at 2140.103 kb on + strand, within CA264_09130 at 2140.113 kb on - strand, within CA264_09130 at 2140.199 kb on + strand, within CA264_09130 at 2140.234 kb on - strand, within CA264_09130 at 2140.301 kb on - strand, within CA264_09130 at 2140.421 kb on + strand, within CA264_09130 at 2140.590 kb on + strand, within CA264_09130 at 2140.591 kb on - strand, within CA264_09130 at 2140.639 kb on - strand, within CA264_09130 at 2140.695 kb on + strand, within CA264_09130 at 2140.696 kb on - strand, within CA264_09130 at 2140.756 kb on - strand at 2140.791 kb on - strand at 2140.792 kb on + strand at 2140.793 kb on - strand at 2140.793 kb on - strand at 2140.886 kb on - strand at 2140.987 kb on - strand at 2140.990 kb on + strand at 2141.017 kb on + strand at 2141.017 kb on + strand at 2141.078 kb on + strand at 2141.080 kb on + strand at 2141.083 kb on + strand at 2141.083 kb on + strand at 2141.084 kb on - strand at 2141.209 kb on + strand at 2141.224 kb on + strand at 2141.419 kb on + strand, within CA264_09135 at 2141.420 kb on - strand, within CA264_09135 at 2141.420 kb on - strand, within CA264_09135 at 2141.453 kb on - strand, within CA264_09135 at 2141.468 kb on + strand, within CA264_09135 at 2141.598 kb on + strand, within CA264_09135 at 2141.599 kb on - strand, within CA264_09135 at 2141.639 kb on + strand, within CA264_09135 at 2141.812 kb on + strand, within CA264_09135 at 2141.813 kb on - strand, within CA264_09135 at 2141.833 kb on + strand, within CA264_09135 at 2141.834 kb on - strand, within CA264_09135
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 2,137,684 + CA264_09125 0.46 -0.7 2,137,780 + CA264_09125 0.52 -0.5 2,137,780 + CA264_09125 0.52 -0.1 2,137,967 - CA264_09125 0.66 +0.0 2,137,967 - CA264_09125 0.66 -1.0 2,137,967 - CA264_09125 0.66 -1.1 2,137,970 + CA264_09125 0.66 -0.7 2,137,970 + CA264_09125 0.66 +0.0 2,138,012 - CA264_09125 0.69 +0.5 2,138,030 - CA264_09125 0.70 -0.4 2,138,080 - CA264_09125 0.74 -0.3 2,138,080 - CA264_09125 0.74 -0.2 2,138,099 - CA264_09125 0.75 -0.2 2,138,155 + CA264_09125 0.79 +0.0 2,138,317 + +0.1 2,138,318 - -0.4 2,138,402 + +0.6 2,138,402 + +0.0 2,138,407 + -0.9 2,138,408 - -0.5 2,138,408 - -0.4 2,138,408 - -0.2 2,138,408 - -0.7 2,138,411 + -0.6 2,138,412 - -0.8 2,138,412 - +0.4 2,138,412 - +0.3 2,138,415 - -0.4 2,138,453 + -0.0 2,138,453 + +0.1 2,138,465 + +0.1 2,138,543 + +0.2 2,138,544 - +0.1 2,138,601 + -1.5 2,138,602 - -1.3 2,138,602 - -1.4 2,138,676 + -0.3 2,138,677 - -0.3 2,138,677 - -1.5 2,138,706 - -0.3 2,138,850 + +0.1 2,138,850 + -0.1 2,138,851 - -0.7 2,138,852 + -0.5 2,138,852 + +0.1 2,138,852 + -0.6 2,138,852 + +0.3 2,138,853 - -1.7 2,138,867 + +0.6 2,138,867 + +0.0 2,138,868 - -0.7 2,138,868 - -0.9 2,138,892 + CA264_09130 0.10 -1.1 2,138,893 - CA264_09130 0.10 -1.7 2,138,904 + CA264_09130 0.11 -0.2 2,138,930 - CA264_09130 0.12 -0.0 2,139,006 + CA264_09130 0.15 -0.2 2,139,006 + CA264_09130 0.15 +0.1 2,139,007 - CA264_09130 0.15 +0.2 2,139,007 - CA264_09130 0.15 +0.6 2,139,009 + CA264_09130 0.15 -0.6 2,139,010 - CA264_09130 0.15 -0.0 2,139,183 - CA264_09130 0.23 +0.1 2,139,271 + CA264_09130 0.27 +0.1 2,139,296 - CA264_09130 0.28 +1.9 2,139,403 + CA264_09130 0.32 -0.1 2,139,404 - CA264_09130 0.32 -0.6 2,139,877 + CA264_09130 0.53 +0.6 2,139,878 - CA264_09130 0.53 -0.6 2,139,907 + CA264_09130 0.54 -0.4 2,139,908 - CA264_09130 0.54 -1.0 2,139,920 - CA264_09130 0.55 -0.6 2,139,920 - CA264_09130 0.55 -0.3 2,139,925 - CA264_09130 0.55 -1.2 2,139,960 + CA264_09130 0.57 +1.2 2,139,961 - CA264_09130 0.57 -1.0 2,139,961 - CA264_09130 0.57 +0.6 2,139,961 - CA264_09130 0.57 +0.0 2,139,961 - CA264_09130 0.57 +0.3 2,140,053 + CA264_09130 0.61 -0.6 2,140,053 + CA264_09130 0.61 -0.7 2,140,054 - CA264_09130 0.61 +0.2 2,140,101 + CA264_09130 0.63 -0.3 2,140,102 - CA264_09130 0.63 -1.2 2,140,103 + CA264_09130 0.63 -0.1 2,140,103 + CA264_09130 0.63 -0.1 2,140,113 - CA264_09130 0.63 -0.2 2,140,199 + CA264_09130 0.67 -0.1 2,140,234 - CA264_09130 0.69 -0.4 2,140,301 - CA264_09130 0.71 -0.6 2,140,421 + CA264_09130 0.77 -0.4 2,140,590 + CA264_09130 0.84 -0.5 2,140,591 - CA264_09130 0.84 -0.5 2,140,639 - CA264_09130 0.86 -0.4 2,140,695 + CA264_09130 0.89 -0.1 2,140,696 - CA264_09130 0.89 -0.0 2,140,756 - -0.1 2,140,791 - -1.7 2,140,792 + -0.8 2,140,793 - +0.1 2,140,793 - -0.1 2,140,886 - -0.0 2,140,987 - +0.7 2,140,990 + -0.2 2,141,017 + +0.3 2,141,017 + -0.1 2,141,078 + -0.3 2,141,080 + -0.7 2,141,083 + -0.6 2,141,083 + -0.1 2,141,084 - +1.6 2,141,209 + -0.2 2,141,224 + -0.1 2,141,419 + CA264_09135 0.15 +0.1 2,141,420 - CA264_09135 0.15 -0.0 2,141,420 - CA264_09135 0.15 -0.1 2,141,453 - CA264_09135 0.18 -1.0 2,141,468 + CA264_09135 0.19 +0.6 2,141,598 + CA264_09135 0.27 +1.1 2,141,599 - CA264_09135 0.27 -0.4 2,141,639 + CA264_09135 0.30 -0.9 2,141,812 + CA264_09135 0.41 +0.9 2,141,813 - CA264_09135 0.41 +0.6 2,141,833 + CA264_09135 0.42 +0.2 2,141,834 - CA264_09135 0.42 -0.3
Or see this region's nucleotide sequence