Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07130 and CA264_07135 are separated by 9 nucleotides CA264_07135 and CA264_07140 are separated by 242 nucleotides
CA264_07130: CA264_07130 - hypothetical protein, at 1,643,264 to 1,645,189
_07130
CA264_07135: CA264_07135 - 7-carboxy-7-deazaguanine synthase QueE, at 1,645,199 to 1,645,852
_07135
CA264_07140: CA264_07140 - hydroxyacid dehydrogenase, at 1,646,095 to 1,647,138
_07140
Position (kb)
1645
1646 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1644.240 kb on + strand, within CA264_07130 at 1644.240 kb on + strand, within CA264_07130 at 1644.262 kb on + strand, within CA264_07130 at 1644.262 kb on + strand, within CA264_07130 at 1644.284 kb on - strand, within CA264_07130 at 1644.284 kb on - strand, within CA264_07130 at 1644.289 kb on + strand, within CA264_07130 at 1644.289 kb on + strand, within CA264_07130 at 1644.294 kb on + strand, within CA264_07130 at 1644.295 kb on - strand, within CA264_07130 at 1644.358 kb on + strand, within CA264_07130 at 1644.359 kb on - strand, within CA264_07130 at 1644.408 kb on + strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.515 kb on - strand, within CA264_07130 at 1644.570 kb on + strand, within CA264_07130 at 1644.616 kb on - strand, within CA264_07130 at 1644.616 kb on - strand, within CA264_07130 at 1644.619 kb on + strand, within CA264_07130 at 1644.619 kb on + strand, within CA264_07130 at 1644.620 kb on - strand, within CA264_07130 at 1644.643 kb on + strand, within CA264_07130 at 1644.643 kb on + strand, within CA264_07130 at 1644.644 kb on - strand, within CA264_07130 at 1644.749 kb on - strand, within CA264_07130 at 1644.813 kb on + strand, within CA264_07130 at 1644.834 kb on + strand, within CA264_07130 at 1644.946 kb on + strand, within CA264_07130 at 1644.947 kb on - strand, within CA264_07130 at 1644.985 kb on - strand, within CA264_07130 at 1645.066 kb on - strand at 1645.066 kb on - strand at 1645.109 kb on - strand at 1645.136 kb on - strand at 1645.147 kb on + strand at 1645.172 kb on - strand at 1645.183 kb on + strand at 1645.184 kb on - strand at 1645.184 kb on - strand at 1645.185 kb on + strand at 1645.185 kb on + strand at 1645.185 kb on + strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.215 kb on + strand at 1645.215 kb on + strand at 1645.216 kb on - strand at 1645.253 kb on - strand at 1645.264 kb on - strand at 1645.318 kb on - strand, within CA264_07135 at 1645.397 kb on + strand, within CA264_07135 at 1645.397 kb on + strand, within CA264_07135 at 1645.398 kb on - strand, within CA264_07135 at 1645.419 kb on - strand, within CA264_07135 at 1645.419 kb on - strand, within CA264_07135 at 1645.489 kb on - strand, within CA264_07135 at 1645.560 kb on + strand, within CA264_07135 at 1645.889 kb on + strand at 1645.904 kb on - strand at 1645.904 kb on - strand at 1645.904 kb on - strand at 1645.958 kb on + strand at 1646.022 kb on + strand at 1646.040 kb on - strand at 1646.056 kb on - strand at 1646.096 kb on + strand at 1646.096 kb on + strand at 1646.262 kb on + strand, within CA264_07140 at 1646.262 kb on + strand, within CA264_07140 at 1646.263 kb on - strand, within CA264_07140 at 1646.263 kb on - strand, within CA264_07140 at 1646.269 kb on + strand, within CA264_07140 at 1646.269 kb on + strand, within CA264_07140 at 1646.299 kb on - strand, within CA264_07140 at 1646.376 kb on - strand, within CA264_07140 at 1646.376 kb on - strand, within CA264_07140 at 1646.406 kb on + strand, within CA264_07140 at 1646.407 kb on - strand, within CA264_07140 at 1646.476 kb on - strand, within CA264_07140 at 1646.476 kb on - strand, within CA264_07140 at 1646.645 kb on + strand, within CA264_07140 at 1646.645 kb on + strand, within CA264_07140 at 1646.646 kb on - strand, within CA264_07140 at 1646.646 kb on - strand, within CA264_07140 at 1646.705 kb on - strand, within CA264_07140 at 1646.734 kb on + strand, within CA264_07140 at 1646.735 kb on - strand, within CA264_07140 at 1646.784 kb on - strand, within CA264_07140 at 1646.792 kb on + strand, within CA264_07140
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 1,644,240 + CA264_07130 0.51 -0.3 1,644,240 + CA264_07130 0.51 -0.6 1,644,262 + CA264_07130 0.52 +0.5 1,644,262 + CA264_07130 0.52 +0.5 1,644,284 - CA264_07130 0.53 -0.0 1,644,284 - CA264_07130 0.53 -1.0 1,644,289 + CA264_07130 0.53 +0.6 1,644,289 + CA264_07130 0.53 -0.0 1,644,294 + CA264_07130 0.53 +0.3 1,644,295 - CA264_07130 0.54 +0.5 1,644,358 + CA264_07130 0.57 +0.2 1,644,359 - CA264_07130 0.57 -1.5 1,644,408 + CA264_07130 0.59 +0.5 1,644,409 - CA264_07130 0.59 +0.5 1,644,409 - CA264_07130 0.59 +1.0 1,644,409 - CA264_07130 0.59 +1.1 1,644,515 - CA264_07130 0.65 -0.0 1,644,570 + CA264_07130 0.68 +0.2 1,644,616 - CA264_07130 0.70 +0.5 1,644,616 - CA264_07130 0.70 -0.1 1,644,619 + CA264_07130 0.70 +0.2 1,644,619 + CA264_07130 0.70 -0.6 1,644,620 - CA264_07130 0.70 -0.5 1,644,643 + CA264_07130 0.72 +0.1 1,644,643 + CA264_07130 0.72 -0.1 1,644,644 - CA264_07130 0.72 +1.1 1,644,749 - CA264_07130 0.77 -0.5 1,644,813 + CA264_07130 0.80 -0.1 1,644,834 + CA264_07130 0.82 -0.9 1,644,946 + CA264_07130 0.87 +0.2 1,644,947 - CA264_07130 0.87 +0.7 1,644,985 - CA264_07130 0.89 +0.4 1,645,066 - +0.1 1,645,066 - +1.3 1,645,109 - -0.0 1,645,136 - -0.3 1,645,147 + +0.0 1,645,172 - +1.0 1,645,183 + +0.5 1,645,184 - -0.3 1,645,184 - -0.2 1,645,185 + +0.3 1,645,185 + -0.1 1,645,185 + -0.2 1,645,186 - +0.4 1,645,186 - +0.1 1,645,186 - +0.1 1,645,186 - +0.0 1,645,186 - -1.0 1,645,186 - +0.5 1,645,215 + -0.3 1,645,215 + -0.2 1,645,216 - +0.1 1,645,253 - -0.5 1,645,264 - +0.0 1,645,318 - CA264_07135 0.18 -0.6 1,645,397 + CA264_07135 0.30 -0.5 1,645,397 + CA264_07135 0.30 -1.0 1,645,398 - CA264_07135 0.30 +0.2 1,645,419 - CA264_07135 0.34 -1.0 1,645,419 - CA264_07135 0.34 -2.5 1,645,489 - CA264_07135 0.44 -0.9 1,645,560 + CA264_07135 0.55 +0.1 1,645,889 + -1.8 1,645,904 - -0.7 1,645,904 - -1.0 1,645,904 - +0.5 1,645,958 + +0.5 1,646,022 + +0.8 1,646,040 - -0.7 1,646,056 - -0.2 1,646,096 + -0.1 1,646,096 + -0.5 1,646,262 + CA264_07140 0.16 -1.0 1,646,262 + CA264_07140 0.16 -1.5 1,646,263 - CA264_07140 0.16 +1.8 1,646,263 - CA264_07140 0.16 -1.2 1,646,269 + CA264_07140 0.17 +0.5 1,646,269 + CA264_07140 0.17 -0.8 1,646,299 - CA264_07140 0.20 +0.0 1,646,376 - CA264_07140 0.27 +0.6 1,646,376 - CA264_07140 0.27 +1.2 1,646,406 + CA264_07140 0.30 -0.7 1,646,407 - CA264_07140 0.30 -0.1 1,646,476 - CA264_07140 0.36 -0.0 1,646,476 - CA264_07140 0.36 +0.3 1,646,645 + CA264_07140 0.53 +0.5 1,646,645 + CA264_07140 0.53 -0.1 1,646,646 - CA264_07140 0.53 +0.8 1,646,646 - CA264_07140 0.53 +0.1 1,646,705 - CA264_07140 0.58 -0.4 1,646,734 + CA264_07140 0.61 -0.5 1,646,735 - CA264_07140 0.61 -0.3 1,646,784 - CA264_07140 0.66 +0.1 1,646,792 + CA264_07140 0.67 -0.0
Or see this region's nucleotide sequence