Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04660 and CA264_04665 are separated by 2 nucleotides CA264_04665 and CA264_04670 are separated by 123 nucleotides CA264_04670 and CA264_04675 are separated by 0 nucleotides
CA264_04660: CA264_04660 - hypothetical protein, at 1,076,612 to 1,081,150
_04660
CA264_04665: CA264_04665 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 1,081,153 to 1,082,160
_04665
CA264_04670: CA264_04670 - hypothetical protein, at 1,082,284 to 1,082,670
_04670
CA264_04675: CA264_04675 - SsrA-binding protein, at 1,082,671 to 1,083,138
_04675
Position (kb)
1081
1082
1083 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1080.984 kb on - strand at 1081.114 kb on + strand at 1082.151 kb on - strand at 1082.162 kb on - strand at 1082.162 kb on - strand at 1082.288 kb on + strand at 1082.312 kb on - strand at 1082.315 kb on + strand at 1082.316 kb on - strand at 1082.436 kb on - strand, within CA264_04670 at 1082.520 kb on + strand, within CA264_04670 at 1082.523 kb on - strand, within CA264_04670 at 1082.562 kb on + strand, within CA264_04670 at 1082.562 kb on + strand, within CA264_04670 at 1082.563 kb on - strand, within CA264_04670 at 1082.667 kb on - strand at 1082.668 kb on + strand at 1082.669 kb on - strand at 1082.706 kb on - strand at 1083.136 kb on + strand at 1083.142 kb on + strand at 1083.142 kb on + strand at 1083.143 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 1,080,984 - -1.7 1,081,114 + -1.4 1,082,151 - -0.0 1,082,162 - -0.4 1,082,162 - -0.1 1,082,288 + -0.1 1,082,312 - -0.6 1,082,315 + -0.4 1,082,316 - -0.8 1,082,436 - CA264_04670 0.39 -0.9 1,082,520 + CA264_04670 0.61 -0.4 1,082,523 - CA264_04670 0.62 -0.5 1,082,562 + CA264_04670 0.72 -0.4 1,082,562 + CA264_04670 0.72 -0.5 1,082,563 - CA264_04670 0.72 +0.1 1,082,667 - +0.5 1,082,668 + -0.6 1,082,669 - +0.6 1,082,706 - +0.6 1,083,136 + -0.4 1,083,142 + -0.1 1,083,142 + -3.1 1,083,143 - +0.6
Or see this region's nucleotide sequence