Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00335 and CA264_00340 are separated by 303 nucleotides CA264_00340 and CA264_00345 are separated by 75 nucleotides CA264_00345 and CA264_00350 are separated by 149 nucleotides
CA264_00335: CA264_00335 - dicarboxylate/amino acid:cation symporter, at 76,903 to 78,207
_00335
CA264_00340: CA264_00340 - ZIP family zinc transporter, at 78,511 to 79,260
_00340
CA264_00345: CA264_00345 - peptidyl-prolyl cis-trans isomerase, at 79,336 to 79,794
_00345
CA264_00350: CA264_00350 - hypothetical protein, at 79,944 to 80,618
_00350
Position (kb)
78
79
80 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 77.860 kb on - strand, within CA264_00335 at 78.063 kb on + strand, within CA264_00335 at 78.072 kb on + strand, within CA264_00335 at 78.131 kb on + strand at 78.207 kb on + strand at 78.208 kb on - strand at 78.214 kb on + strand at 78.240 kb on - strand at 78.259 kb on + strand at 78.261 kb on + strand at 78.261 kb on + strand at 78.264 kb on + strand at 78.264 kb on + strand at 78.265 kb on - strand at 78.272 kb on + strand at 78.278 kb on + strand at 78.329 kb on + strand at 78.330 kb on - strand at 78.330 kb on - strand at 78.363 kb on + strand at 78.363 kb on + strand at 78.363 kb on + strand at 78.482 kb on + strand at 78.621 kb on + strand, within CA264_00340 at 78.885 kb on + strand, within CA264_00340 at 78.900 kb on + strand, within CA264_00340 at 78.900 kb on + strand, within CA264_00340 at 78.901 kb on - strand, within CA264_00340 at 79.011 kb on + strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.041 kb on + strand, within CA264_00340 at 79.050 kb on + strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.053 kb on - strand, within CA264_00340 at 79.078 kb on + strand, within CA264_00340 at 79.079 kb on - strand, within CA264_00340 at 79.079 kb on - strand, within CA264_00340 at 79.081 kb on - strand, within CA264_00340 at 79.090 kb on - strand, within CA264_00340 at 79.198 kb on - strand at 79.258 kb on + strand at 79.258 kb on + strand at 79.259 kb on - strand at 79.314 kb on - strand at 79.411 kb on + strand, within CA264_00345 at 79.474 kb on - strand, within CA264_00345 at 79.539 kb on - strand, within CA264_00345 at 79.705 kb on + strand, within CA264_00345 at 79.713 kb on + strand, within CA264_00345 at 79.759 kb on + strand at 79.802 kb on - strand at 79.808 kb on + strand at 79.824 kb on - strand at 79.825 kb on + strand at 79.825 kb on + strand at 79.825 kb on + strand at 79.826 kb on - strand at 79.843 kb on - strand at 79.913 kb on - strand at 79.916 kb on + strand at 79.920 kb on + strand at 79.920 kb on + strand at 79.921 kb on - strand at 79.921 kb on - strand at 79.968 kb on + strand at 79.969 kb on - strand at 79.989 kb on - strand at 80.103 kb on - strand, within CA264_00350 at 80.182 kb on + strand, within CA264_00350 at 80.183 kb on - strand, within CA264_00350 at 80.239 kb on - strand, within CA264_00350
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 77,860 - CA264_00335 0.73 -1.6 78,063 + CA264_00335 0.89 +0.2 78,072 + CA264_00335 0.90 -0.9 78,131 + -0.1 78,207 + -2.7 78,208 - +1.8 78,214 + -0.5 78,240 - -0.2 78,259 + -0.9 78,261 + -2.6 78,261 + -0.2 78,264 + -3.3 78,264 + -1.6 78,265 - -0.1 78,272 + -0.1 78,278 + -1.8 78,329 + -0.2 78,330 - -1.2 78,330 - -1.2 78,363 + -0.6 78,363 + -2.1 78,363 + -1.6 78,482 + -0.2 78,621 + CA264_00340 0.15 -0.2 78,885 + CA264_00340 0.50 -1.6 78,900 + CA264_00340 0.52 -0.7 78,900 + CA264_00340 0.52 -1.6 78,901 - CA264_00340 0.52 +0.9 79,011 + CA264_00340 0.67 -1.1 79,019 - CA264_00340 0.68 -2.2 79,019 - CA264_00340 0.68 -2.2 79,019 - CA264_00340 0.68 -2.2 79,041 + CA264_00340 0.71 -0.2 79,050 + CA264_00340 0.72 +2.3 79,051 - CA264_00340 0.72 -2.4 79,051 - CA264_00340 0.72 -2.7 79,051 - CA264_00340 0.72 -1.9 79,053 - CA264_00340 0.72 -2.2 79,078 + CA264_00340 0.76 -2.1 79,079 - CA264_00340 0.76 -0.8 79,079 - CA264_00340 0.76 +1.8 79,081 - CA264_00340 0.76 -3.4 79,090 - CA264_00340 0.77 +0.8 79,198 - -2.4 79,258 + -0.2 79,258 + -0.5 79,259 - -0.6 79,314 - +0.4 79,411 + CA264_00345 0.16 +0.2 79,474 - CA264_00345 0.30 -0.8 79,539 - CA264_00345 0.44 -0.4 79,705 + CA264_00345 0.80 -0.2 79,713 + CA264_00345 0.82 +0.2 79,759 + -1.6 79,802 - +0.3 79,808 + -0.4 79,824 - -2.4 79,825 + -0.2 79,825 + -1.2 79,825 + -0.3 79,826 - -0.6 79,843 - -0.3 79,913 - -1.0 79,916 + -0.8 79,920 + -1.2 79,920 + -0.2 79,921 - -0.3 79,921 - +0.5 79,968 + +0.5 79,969 - -0.9 79,989 - -0.3 80,103 - CA264_00350 0.24 -0.1 80,182 + CA264_00350 0.35 -0.5 80,183 - CA264_00350 0.35 +0.3 80,239 - CA264_00350 0.44 +0.3
Or see this region's nucleotide sequence