Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00295
Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
69,982 | + | +0.1 | |||
69,982 | + | +1.3 | |||
69,982 | + | +1.0 | |||
69,982 | + | -0.9 | |||
69,982 | + | +0.4 | |||
69,983 | - | -0.3 | |||
69,983 | - | -0.3 | |||
69,983 | - | +0.2 | |||
70,006 | + | +1.3 | |||
70,007 | - | +0.0 | |||
70,008 | + | -1.1 | |||
70,008 | + | -0.6 | |||
70,008 | + | +0.2 | |||
70,009 | - | +0.9 | |||
70,009 | - | +1.5 | |||
70,009 | - | -0.1 | |||
70,015 | + | -0.2 | |||
70,055 | - | +0.8 | |||
70,091 | - | CA264_00295 | 0.13 | -0.6 | |
70,097 | + | CA264_00295 | 0.16 | -0.7 | |
70,177 | + | CA264_00295 | 0.44 | -1.1 | |
70,180 | + | CA264_00295 | 0.45 | -0.2 | |
70,180 | + | CA264_00295 | 0.45 | +1.5 | |
70,181 | - | CA264_00295 | 0.45 | -0.2 | |
70,308 | + | -1.5 | |||
70,308 | + | -0.8 | |||
70,360 | + | -0.1 | |||
70,360 | + | -0.0 | |||
70,360 | + | -0.1 | |||
70,361 | - | -0.2 | |||
70,361 | - | +2.8 | |||
70,361 | - | -0.4 | |||
70,361 | - | +0.0 | |||
70,365 | + | +0.9 | |||
70,366 | - | +0.6 | |||
70,366 | - | +0.8 | |||
70,366 | - | +0.5 | |||
70,395 | + | -0.1 | |||
70,396 | - | +0.4 | |||
70,497 | + | -0.7 | |||
70,497 | + | -1.5 | |||
70,510 | + | +0.6 | |||
70,518 | + | -0.6 | |||
70,518 | + | -1.2 | |||
70,519 | - | -0.6 | |||
70,519 | - | +0.0 | |||
70,558 | + | +0.5 | |||
70,559 | - | -2.1 | |||
70,592 | - | +0.5 |
Or see this region's nucleotide sequence